Array 1 921539-921035 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045802.1 Paenibacillus sp. B01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 921538 33 100.0 35 ................................. CCGAGCAGCACCAGCGAGCCGCAGCCCCAGACCCC 921470 33 100.0 34 ................................. ATCGCTGACCTGCCGCTGACGCTGAACGACCGCG 921403 33 100.0 34 ................................. CTGAGGTGGTTACTGGGCTAGACGCGATCCCCCA 921336 33 100.0 34 ................................. CGCAGCTACTACAACAAGGTGCAGATCAAGACGC 921269 33 100.0 34 ................................. AGCGGCAAGAAGAAATGGATCATCGTCGGCGCGA 921202 32 90.9 36 ...........C.T-.................. GAGAACTCGACGCTGATCGGCATGTACTTCATCAAG 921134 33 84.8 35 ..TA..........G......A...G....... GGTCAGGAGGGCTCGGGGCCAGAAAGGGGCTTTGA 921066 32 72.7 0 ..TA......C-.TG......A....C.A.... | ========== ====== ====== ====== ================================= ==================================== ================== 8 33 93.5 35 GTCGCTCCCCGTACCGGGAGCGTGGATTGAAAC # Left flank : CGCCGCTCCGGCGCTCGTCGACGGCAAGACGTACGTGCCGCTGCAGTTCTTCCGCGACGTCATGATGCTGAACAACGCCTACGTGTTCGAAGGCCAGATCGACATCAACAACCAGGAGAAGATGGAGTAGGATCTATGGAATGAACGCAGGGCTGTTCCCGACGCCGTCTCACGGCGCGGGGGCAGCCCTGCTTGGCTTTCAGACGGCTTCGCGTGGAGGCAGGTTGGAGGCGATGGAAGCACGGCGCTTCCGGCCCGATAAGGAAGACATTGGCAGCGTAATGAAGATCAAGTATGATTGAAAGTAGAGCGGGTGCTTGGTGCGAATGCCAAGCTCCCATGAAAACCCCGGGGGATTCGCACCTCGAAACTTGTCGAATCGAGCCTGAAATCACACTTTATCGATTATGTCAAGAATGTGGTCATACTTTTTAAGTTGATTGAAGTAGGAAAAGAGGATGGTTACATACCTGCAGGGTATGTAACTGCATTTTTTCGCT # Right flank : TAAACATGGCCACGTATGGCACAATAACATCCTAACGTCGCTTCCTACACGGGAAGAAGGAAGAAATGCCCGAGCTCCAGCGATTAACGCCTGCCACACCTTGCCCTTCCCCGCACTCCCCCAATCCACGACAACGAGAAAACAGGTAAACGCGACATGCTGCCGCGCTTACCTGTTTTGTATTCTTCCCGCAGCCAAAGCTTAATCCAAGTCAGCTAGGCAAGTGTCCGAGATTCCAACAAGAATTTTCCTCATGTCTATTCCGTCATCGCCCTCTCCCCATTGCTCCTTCGGAGAACATAAGAGTTGTACTCATCCTGCTCGATCTCCAGCTTGCCCTGAAAATCAAACCCGCATTTTTCGAGGACTCGATTGGACGGCAGGTTGCGGACAAGCGCGACCGCGCACAGAGCCTCGACATCGGCCTGATCAAACAAGTAGCGTATCATCGCTTGTGCCGCTTGAGCCGCATAGCCTCTGCCCCGATGATCCTTGGAGAC # Questionable array : NO Score: 8.94 # Score Detail : 1:0, 2:3, 3:3, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTACCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2512389-2514408 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045802.1 Paenibacillus sp. B01 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2512389 32 100.0 33 ................................ ACCCTTTCTCGCTGTTCGGCGGAAGGCCCGACG 2512454 32 100.0 35 ................................ GTTCGTGTTTAAGAGTCAAAATAGCTTCAGCTGCT 2512521 32 100.0 34 ................................ CCCAGGCGAGGCCCTATTCGGAAGTACGGTCGAG 2512587 32 100.0 34 ................................ TTTTCCCGCCTTGGCGAGGATCGCCATATAGTCG 2512653 32 100.0 33 ................................ GCCGGCGGGGTTGGAAAGGCGTGAACCATGCTG 2512718 32 100.0 36 ................................ ACCTTGTCCAACTGGCACCGGCGCGGGCGCGACGTC 2512786 32 100.0 35 ................................ CTCGAATCGAAGGGCTTCACGGTGGTTCGTCACTA 2512853 32 100.0 34 ................................ GCTCGTTCGGCACGGTCATTCGCGACGTGCTGGA 2512919 32 100.0 34 ................................ AATAAGACGCATGAGTTGCCGGTAGACCATCGAC 2512985 32 100.0 34 ................................ CAATTCTTTAATAATGGCTTGAATTGCTTTTTCT 2513051 32 100.0 34 ................................ CCATATATCGGCATATCCACAATGCGCTACTTTA 2513117 32 100.0 33 ................................ CATTGCCGCTGGATCGACTCCCGCGCCTCCTGC 2513182 32 100.0 33 ................................ TCATATATGCAAATGATGGAAGCTGTGCATGCA 2513247 32 93.8 35 ...........CA................... GCAAAAGCCGCAATCGTATGAAGCCTGCGAACGTC 2513314 32 90.6 35 ...........CA......A............ CATTCGCAGATACCGATAATTCTCATTCTCGACTC 2513381 32 93.8 34 ...........CA................... CGCAGCGGGAAATTGGCAAAGACCTGCGATCCGT 2513447 32 93.8 33 ...........CA................... ACCGAGCCAGAGCCGCGAAAAGGAGAAGAGGGC 2513512 31 90.6 34 ......-....CA................... TGCTACTTGCCGGCCATCGTCGACTGGCCGTTAT 2513577 32 93.8 34 ...........CA................... TGGAGGACGCCTGCGATTTTCCCGAGGTCTTGGA 2513643 32 93.8 35 ...........CA................... CTGATCTGGGCGATCAACTGGGTGGTGCGTCGTAT 2513710 32 93.8 35 ...........CA................... ACGGACACACCCAGCGCCTGCAGCACGTCCGCGAC 2513777 32 90.6 34 ...........CA.........A......... ACCCCTTGACTACCACTACCACGACGCAAAAAGC 2513843 32 100.0 34 ................................ GGAAGCTAACATATCACCGAACACCCGTTCGTGA 2513909 32 100.0 33 ................................ GACTGACGCACGGCCTGCGGACGTTCGCGGAAC 2513974 32 100.0 33 ................................ TCTCCACAAAAGCCTCTATCATAATAAACAAGG 2514039 32 100.0 37 ................................ GCCGCCTGGCGAGACGCGACGCCGATGCACAACGATC 2514108 32 93.8 34 ......T................A........ GTCTGGTTCTTTATATGAGACAACGTCTCAAGAT 2514174 32 100.0 37 ................................ TGGCCGCCATGCTCGTCTTGTTCGGGCGGGGGTGACG 2514243 32 100.0 37 ................................ TCAGCAAAGAGTCGTGCATTTTGGAAATGAAGCAGAT 2514312 32 93.8 33 ...........CA................... TCCACGGCCTCGAGATCCAACGGGATACCGGCC 2514377 32 81.2 0 ....T......CC.......A..AT....... | ========== ====== ====== ====== ================================ ===================================== ================== 31 32 96.9 34 GTCGCTCCCCGTGGGGGAGCGTGGATTGAAAC # Left flank : CGAGATCATCGGCATCACGATGCCGAACAGCGTCGAGCTCAAGGTCGCCGAGACCGAGCCGGGCGTCAAAGGCAACACGGCTCAAGGCGCGACGAAAAACGCGACGCTCGAGACCGGCTACACCGTCCAGGTGCCGCTGTTCATCAACGAAGGCGACCTGCTGCTGATCGATACGCGCGAAGGCCGCTACATCTCCCGCGCCTAGACGCTTGTCCGACCGTGCCGCTCCGCTTTGGCGGAGATCGGTTGTGGGATTTGCAAGGCCGTCCGGCTTGCCGGACGGCTTTTTTGTTATTTTGGCGGCCTCGAGCGGGAGCCTGTTGCGGCCGGTGCGAATGCCAAGCTCCCATGAATTCTCTAGTAGATTCGCACCTCGAAAATTGTCGAATTCGATCGAAAAATCGCAGTCTTGATTTTTGTCAAGTCTAAACTTATGCTTATTTTATAGTAGCAACAGTTGCCGAAATGACTTTTCAGCGCTGAAAGCGCTGTTATTTGCT # Right flank : CATCTACTCTGCAATGCGGGAGTGTGCTATAATCGATACTTGATTGCAACAGCTATAGGTGGGGAGTGAGACAGCGGTGTCGTTGATCGTAATGAAGTTCGGCGGCAGTTCGGTCGGCACGACGGAACGCATGCAGCGAGTAGCACAACGGATCGTGGAGAACAGGGATGCGGGCCATAAGGTCGTCGTGGTCGTATCGGCGATGGGAGATACGACGGACGATCTGATCGACCAGTCCAAACGGCTGAATCCGAATCCGCCGGCACGGGAGATGGACATGCTGCTGACGACGGGAGAGCAGATTTCGGTCGCTCTGCTGTCGATGACGATACATGCGATGGGCCGCAAGGCCGTATCGATGACGGGCTGGCAGGCAGGCATCCGCACGGAGCCGTTGCACGGCAAGGCGCGCATCACGGACATCCAGCCCGACCGCATCCACGCGGCGCTGGAGGAAGGCGGTATTGTGATCGTCGCGGGCTTCCAAGGAATGACGGAGC # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGGGGGAGCGTGGATTGAAAC # Alternate repeat : GTCGCTCCCCGCAGGGGAGCGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.20,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 5332166-5331206 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045802.1 Paenibacillus sp. B01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 5332165 32 96.9 34 ..................A............. GCCAGGCAAGCCGCCCTCAACGAAGAACGGCGAG 5332099 32 96.9 37 ..................A............. TCGCCTAGCTCAATCAACCTTTTGGTGATTGTACCGC 5332030 32 96.9 33 ..................A............. CACTCCGATTTCATATCTTCGAGTCGTGAAAAA 5331965 32 96.9 34 ..................A............. AAGCGGAGCCGGTCGGACGTCGCCATTTTGATTA 5331899 32 100.0 34 ................................ CACACGATATAGCCTCTCGACGAGGTGTTCGATT 5331833 32 100.0 34 ................................ CGTACATGAGCGAATAGCAGACGCATTGCTTGAC 5331767 32 100.0 35 ................................ GGCGGTTGGTAGGCCGGCCGGCTGCCGGGAGCCGC 5331700 32 100.0 36 ................................ GCCCCGCTGATGCCGCCCATGATCGCCCCGATGCCC 5331632 32 100.0 33 ................................ CGATAAGTGGGGAAGCCGCATACAGTTGCCCCG 5331567 32 100.0 34 ................................ CTCCGCGAAGGCGGCGAGATCGGCGATACGCTGA 5331501 32 100.0 36 ................................ AGATGCTGCTGCGATTTCGTCCATCGAGTCCAATCA 5331433 32 100.0 34 ................................ CATAGTGTTTTTCGTCGCCTCGAACTGCTTGCGC 5331367 32 100.0 34 ................................ GGGTGCGTGAGCAATCGCGTCAGGACGGTGTTGG 5331301 31 87.5 34 ...A............-...A..A........ GCGATTCGCGCGTCTCTGCCATCTGCTCCGCCGT 5331236 31 71.9 0 ...C.......GCAT.......A-....G..G | ========== ====== ====== ====== ================================ ===================================== ================== 15 32 96.5 34 GTCGCTCCCCGCTGGGGAGCGTGGATTGAAAC # Left flank : AAGGCATCGGCATGAGCGAGGAGCAGGCGCGCCGCATCTGGGAACGCTTCTACAAGAGCGACGAAGCCCGCGGCGGCCGCGGCGGCACCGGCATCGGGCTGTCGATCGTCAAGCATATCCTCGACGCGCACGGCTCGCGCATCGAGGTGCGGAGCGAGCCCGGCCAGGGCAGCGAGTTCCGCTTCTGCCTCGTTCGGGCGGGCTTGGCCGGTTCCGACGAGCAATACCGCGAGTCATCCGAGAAATAGGGATGACTCGCGGCTTTTTTTTGCATTGTTGGCGGCCGTGGGCTGGCAGGAGCCAGCTGGGCAGCAGGTGCAGCAGGTGTAGTGCGAATGCCAAGCTCCCATAAAATCTCCGGGGGATTCGCACCTCGAAAGTTGTCGAATCCCATCGAAAAATGGTTGTCTTGATTTTTGTCAAGTCAAAACTTATGCTAAATTCAGAGCAACAGTAGAAGCTGGCACCCCCTTTCAGGGCTGGAAGCGCTGTTATTCGCT # Right flank : CCTATTTCCGTAGCCTTTGGAAAGGCGAGGGAATCTTTCCCTATTGGGAGCTTGAAAAACTAGGCGAGCGCTTCTCCTCACGAGAGATCATAAAAAACAGCTGATAAAAGCACAAAACCAACCCCCTCTGCGCGAGGCGGTTGGTTTTGTGCTTTTTCACAGGCAGTGTTCCCCCGCCTTCGCCCTGGGAGGCATTTCAAGCCTCTTTCCAGACTCGTTTCGCCTGACCCTTCCTGTTCTATTCTATAATTCCCCTCTCATACTCTATAACGATGAGATGGAAGTAGAAGAAGACTCCGTCTACGGCGGGAAAGGGGACATGTGGAGATGCGGCAGGAAAGGGAGCGGGCGCGCTGGACTTGGGACGAAGCTGTCCGAAGGACAGAGGGGACCGAGCCGGAATCGGACCCGATGATTACGGCGAGAGATCGGTCTTTGCCGGCCGGCGAAAGCAGGAGCGAGGAAGTCCGGCAGACGAGAGATTCGCCGCGAGAAGCAAC # Questionable array : NO Score: 9.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCTGGGGAGCGTGGATTGAAAC # Alternate repeat : GTCGCTCCCCGCTGGGGAACGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //