Array 1 120045-118674 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFQB01000001.1 Escherichia coli strain JML116 sequence001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 120044 29 100.0 32 ............................. AAATCGACGCGCTGGCCCGGTCCGCGCAGTCA 119983 29 100.0 32 ............................. GTATTTACAATGGTCTTATCTTAGGAAAAATC 119922 29 100.0 32 ............................. TTACGATCTCCGCGATAACTAACGGTGTTGAG 119861 29 100.0 32 ............................. AAAAAACAGTGGTACTACCGCCCCGCCGAACA 119800 29 100.0 32 ............................. GTGTGTTTTTTGCGCCACGGCGAACGGATTCA 119739 29 96.6 32 ............................C CGCAAGGTAAAGGCTGGTTAGAGGGGGTGAGC 119678 29 100.0 32 ............................. GCTCAGGCTGATGATGATGCGGCGTTTATTGA 119617 29 100.0 32 ............................. TCGCCAGTGACATGGAAGCGCGCGACGAATCG 119556 29 100.0 32 ............................. ATTTGGTGTATCCCACACAGCTATTAATAACA 119495 29 100.0 32 ............................. ATGCCGACATGACGGATGAACAGCTTTATGAC 119434 29 100.0 32 ............................. ACCTGGGAGAAAAAATACGGTCAGGAAATTGA 119373 29 100.0 32 ............................. GTCGCGCGGCTGGCGTAGTGTGGGGTGCTGGC 119312 29 100.0 32 ............................. CGGAACATCGTATATCTATCTACGCGAGAACC 119251 29 100.0 32 ............................. ACGATACCGATATTTGGGCGGAGGCGATAGGG 119190 29 100.0 32 ............................. GAGGGCCTGGTTTTAACGTGGGCGCGCAACGC 119129 29 100.0 32 ............................. CCAGAACTCTGCGGCGATGTCGAGCGCCTCAC 119068 29 100.0 32 ............................. GAGCATTGATGGCAACTGGTCGTAAAAACAAT 119007 29 100.0 32 ............................. AGGCTGGCGGTCTGATGATGATCACTATTGAG 118946 29 100.0 32 ............................. GAGAGTTTGGACGGCATCCCTGTTGGTGCGTA 118885 29 96.6 32 ............T................ GGAGTTCAGACATAGGTGGAATGATGGACTAC 118824 29 96.6 32 ............T................ CCCGGTAGCCAGGTTTGCAACGCCTGAACCGA 118763 29 96.6 32 .................A........... GCAACGACGGTGAGATTTCAAGCCTGACGCTG 118702 29 89.7 0 .T.........AT................ | ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.0 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGTGCTTGCTGCTGGGGAAATACAGCCGCCGGCCCCACCTGAAGATGCGCAGCCTGTTGCTATTCCACTTCCCGTTTCTCTGGGAGATGCCGGACATCGGAGTAGCTGAGATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTTCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTGGTGATGGCATGGGCTACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACTCCGGTAGATTTGGATGGTTTAAGGTTGGTCTCTTTTTTACCTGTTTAAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGTTCCCATTTTCAAACCCATTAAGATGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTGCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATACCGGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCTGGATTTGTGGTGGCGGCAATTCCATGGCTGCGGGCAATTGCCAGCGCCCGGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //