Array 1 48141-49877 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPGA010000010.1 Bacteroides uniformis strain 1001217B_150727_B7 NODE_10_length_225296_cov_31.3565, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 48141 47 93.6 30 ....................GCT........................ AAGCCGTCCGCATCGTACAGTCTCACGGCA 48218 47 100.0 30 ............................................... GATAGATACCCCCGACACCGCCTGCACTTC 48295 47 100.0 30 ............................................... GCGACGAGGAACGCTTGCTTAAGGGCTTAA 48372 47 100.0 30 ............................................... GCTTTCACCGCTTTTGCCGTGCATGTTTTG 48449 47 100.0 30 ............................................... TCACGTTACACCCACCACAAAATGGTTCTA 48526 47 100.0 29 ............................................... ATTATTTAGTCGGCAAAAATAGGCGAGTA 48602 47 100.0 30 ............................................... AGTATAAAATAGGTATAACACTTTATTTGG 48679 47 100.0 30 ............................................... GTATCTTCGTTATGACGTGCTTTCTGAAAA 48756 47 100.0 30 ............................................... TGAATGCCGCACGCCCTGCGTACAGCAATG 48833 47 100.0 30 ............................................... ATGTTTCCTTTGGAGCGTCGCATGTATTAC 48910 47 100.0 30 ............................................... TCTAAAGCAGTTTAATTATGGCATGCATAA 48987 47 100.0 30 ............................................... ATCGCCAAACGGACTGATAGACCTATTCGC 49064 47 100.0 29 ............................................... AGCTTCTCCAAAGGTTAACACACTTACAC 49140 47 100.0 30 ............................................... ATCGTTCGTCATACGCTTGCTTTGCAGTTA 49217 47 100.0 30 ............................................... CCGCCGAGAAAATCGCCCGCACGTTTGAGG 49294 47 100.0 30 ............................................... GCATTGTGAGATTAAGAGATGAAAAGTCAA 49371 47 100.0 30 ............................................... CGCCTTATGTCGCAGCAGCTAAGCATTTTA 49448 47 100.0 30 ............................................... AACTCCTCAAGAAAGTTTATAAGAGCAATA 49525 47 100.0 29 ............................................... TACTCCCGACAAAGACTGATGAGCTGACG 49601 47 100.0 30 ............................................... TTGTCAAACTTCTCTATTCTACTGCTATAC 49678 47 100.0 30 ............................................... GCACCTTTTTCAAGGTAGGATAAATCACAG 49755 47 100.0 29 ............................................... TAAAAATTAAGGAAATGAAAGAAATCCAG 49831 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 23 47 99.7 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCGTACTTATCGGATTCTTTCAGCCGGCTGATGCTGACGGGACCGAATATCTCGTCGGGTGTAGAGAATCGGGACATCAGGTATTCGAAGGCACGGGCATCTGTAAAAGCAGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGCCCCAGGAGCAGGATGCTCTCACCTGCCAGGGCTGCCAGCAGGGAGAGGTTTATTTCGGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGGCGGATGCGTTGGATCATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACCAAATAGTAGCGAAATCAGAGAGATTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACACAC # Right flank : CAGAACTGGAACATCGTAAATCCATCCTTTTGCAGATTTTTTCTAAATTCCGCATACGCCTTTTTATCCTTCTTGGTTTCGGTAGGCAAATCAAACAACACTAATACCCACATAATGCGATATTCACTAAACCGGTCCATCACATCTCTGGATAGGATATTTTACGCAACTCACCACTGAAACATTTATACAGAGAAGCCGTAGTCTGCCCAACAGCTACCATCAACGGACTACGTTTTCCCGAAATAACAGTCTCTAATGTAGGAATTGTCAGTAACCTCGCTTTCAATTCTCTCGTCAATTCAACACAATTCGGTTCTGCTTCCTTGAATATATCATATACCAACCTATCCACATAAGGGCGATAAGGTTCCATTATATCATCTGCCAGACAATAAGCATTATAACGATTATGATGATGTATTCCCAAAGTAGGTAGAAGCCCACTTGTCACCAAAGCACGAGCAACAACTGCCCTCAAAATAGCATACCCATAATTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //