Array 1 227578-226024 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB900537.1 Thioalkalivibrio thiocyanodenitrificans ARhD 1 scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 227577 28 100.0 33 ............................ CCACCGAAGCCGGCAAAGCTTGGTGACTTCGAC 227516 28 100.0 33 ............................ CTCTGATAGCCGCCCCTCCAGGCGACCAACTAC 227455 28 100.0 33 ............................ CATGATTGTTGGCGGCGGCATCTTTGCTTATGC 227394 28 100.0 33 ............................ GCAGGGGCTAAGCTATCGAGAGATCGGATCGCG 227333 28 100.0 33 ............................ CTCTGATAGCCGCCCCTCCAGGCGACCAACTAC 227272 28 100.0 33 ............................ GATACGCCCGCAATGACTGCCGGCCGATACTCA 227211 28 100.0 33 ............................ GCCGCGCACTCTTCGAGCGAGAGTTCTTCACAC 227150 28 100.0 33 ............................ TTTGCCTGGAGTCAGCTTGCGTGTCCGGTCTTC 227089 28 100.0 33 ............................ CCAAGAGCTGCGGCAGAGGTTCTTGGCCTCTCG 227028 28 100.0 34 ............................ CCAGTACATCAGCGTACTGGGCTCGGAATCCCGA 226966 28 100.0 33 ............................ CCCAATGTCAATGTTTGGCGGGGTTACTGCGGT 226905 28 100.0 33 ............................ CTCTTCCCTGGCCGGGGCGACGGTCGAGGTGAT 226844 28 100.0 33 ............................ GCCAGGGGCATTCCCGTATCGAGATCGCGAGAT 226783 28 100.0 33 ............................ CCACTTAGCTAAGAGGATTTAATTATGCACATA 226722 28 100.0 33 ............................ CGATGATTATCACCAACGAAACCCTCGCGAAGC 226661 28 100.0 33 ............................ CTACCGTGCGGCATGCACGGATGACGATGAGGA 226600 28 100.0 33 ............................ TCCTTCAGGACCTCGGCCAGGGTCACCTTGCGT 226539 28 100.0 33 ............................ CAACCCTCACCGCGCCCGGCGCCTGCGTCCTGG 226478 28 100.0 33 ............................ TGAAATTGGCGGGAAAGGTACGGCGATCGGAGC 226417 28 100.0 33 ............................ CACATGGTGCATGCCCTAAAACGCAAGTCGAAC 226356 28 100.0 33 ............................ CATACGAGATGTGGCTTCATGGCGCAGGTCATG 226295 28 100.0 33 ............................ TTTGTATTTGTAGCTATACCGCCTCGACGCCAC 226234 28 96.4 33 ............C............... GTAGGCCGGGTCGTTGAGGTGTTTCTTGAGGAT 226173 28 100.0 33 ............................ CTGGCCGCGGATCCAGACATCGAGTTGCTCCCG 226112 28 96.4 33 .C.......................... GCAGATCCGCAGCCCGGAGGACCGCATTTGTCA 226051 28 85.7 0 ............C..........T.G.T | ========== ====== ====== ====== ============================ ================================== ================== 26 28 99.2 33 GTCTCCCCCGCGTGAGCGGGGATCGACC # Left flank : GGCCTTTGGGGCTGTTCAGGCGATGAAAGACGGCAAGGCAGACGGCATGGAGCGAGAGGTGCGACGCAGAGCAGTGCGACTATTCCGCCAGGAAAAGATCATTCCTCGAATGATCGACCGGATTAAGGAGTTACTCGATGTCGATGACCGCAGTAGTGACTCGTAATGTATCGCCTCGTGTGCGTGGTTTTTTGGCCTCAGCTATGCTCGAGGTGGCACCCGGAGTGTACAGCGCCCCGCGTATCTCCCCCGCAGTAAGGGATCGCGTGTGGGGCGTACTTGAGGAATGGTTTGTCAACGAAAGAGAGGCGTCGATAGTCATGCTGTGGCAGGACAAGGAAATGCCTGGAGGTCAGGCGATGCGAGTGCTCGGCAGTCCGCCGGTCACCCTGATCGATGTTGATGGTCTGCTACTGGCGCGAAGAGCAGCATCCCCTGATTGATCACGCTCTTTAACAACTAGGTAAAATCTTCGTAGTAACAGTCGCTTATGCGATAGA # Right flank : CTACCCCTTCTCTGGCCTCAGGGCCGCGACAGCATTGGATGCTGCGCGCTCAGACAACTTCCCGGGTTCACTTATCTTGAACCATGGTTCATATTCATGGACCGACAGTCGTTACCTGTGCTATACTGGGTCTACTCTACTGTTGATTGCGAGCGCCTACAGAAAGGCGCCGCGCCCTGGCGATATCTGGCCCCCGAAAGGCAAGCCCAGCGCCCAAGAATGGACCGTCGCACGCTTTCCTGATGGCAGCTGGACCACCGGCGGGCGGCCCGACGATCCCGACTATGCGCAGTGCGAGCTGTTTATCATCGAGGCGCCGGACCGGGGGGCGGCCATCATGCGCGCTCAAGCCAAACGGCGGCGCCAGGCTCGCAAGGCGAACGGCTGAGCGCGAGAAGTAGCCGATACCCAACAAACCCCGGATCAACAACCTTTTCGACTGATGAAATCGATACCGATTAAAACCAGGATCCGTGAATCGTACATCCCGGGAATCGGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCGTGAGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 237812-238061 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB900537.1 Thioalkalivibrio thiocyanodenitrificans ARhD 1 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ======================================= ================== 237812 34 100.0 39 .................................. CCTCACCGGAATCTTCAACGTGTTACACATCTCCTGAAA 237885 34 97.1 37 ...........G...................... AAGAGCCACAGAGCTCGACCGCCCATCCAGACAGAAA 237956 34 94.1 38 ........C....A.................... ACTACGCTCACGTTCGTTTCCTTGAACAGCGTAACCGC 238028 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ======================================= ================== 4 34 97.8 38 GTCTCTACTACAAGGCCGCAGAGCGGGCATTATC # Left flank : TCGCGCAGTTCTGCTGGAAAAACAAGGCGAGGTTTGGAGGGGATGTGTATTGTCGCGACTGTCAGGGGAAGTTCTGACCAGGTGTCCGCGGCGGTTTAAGGCAAGAGAGAAGACACCCTCAACCGGTTTGATTGAGGATGTCCTGGTTGAATCAGAAGAGGGGGAGGTGGGTTACCTGCTCGCCGTCTTTCTCGCAGATCACAACAGTCACCTCGTACTCCTTCTTGGCCTTGAAGAAAGCAGCTGCTTTTTGCTGCGCCTCGCGGCTGCTGCCGGCCTCGACCTCTGTCTCTCGGCCGCGGTAAAACGCCTTGTATCCGTTCATCTCTTATCCTCTCGTCGGGGCTCCAGATCCGCATGACCTGGCTGAGCCGAAAGCACCTTTAGGGCCCTCGGCGCACTGATCTCGCATGGTATAGGGAAAACATCATGGGCGGGGTGGTTCGCCGAGCAGGCATTATCATGCCGCGCGCCAGTTCAGAGGCTCGAACGTCAGGTAG # Right flank : CACGACAGCTCTTAAAGCTCATTCTCCGGGGTGGTTCATGGGCCCATTTTCGAGCGCTCATTAAAGCTCGGCTGGCTGGAATTATAACGCTTTGATTCTGCTTGCGCCAGCGTCGCCACCACCGGAGCGCTCGCGCTCATCGCAGCCTCGAGGATATCGAGTCTGATCCAAACAATCCCGCAGTACCGCCCTGCTTAGCTCGGCGCTAGGCGATCAACGAACAAGAACCCCGCAACGCACTTTGGCGCCACAGGGTGCCACCACCTTCAAGCCCTTCAAGCATTCAATGGAGGGCAGCATCTTGTCGTCGGAAGTTATACCTTCCGACCAGGGTAGGTGGTAGGTTCTTGGGTATTTGATTTTCATGGCCAATGCCTCTCGATCCAAGTTTCCCGCTCGATCGCTCGAATCATCAAAAAAGGCCTCCCCAGTCGGATAGACTGAGAAGGCCTTGGTTGAATCAATCCTTGGGAATTACCCCTCGTCGTCCCCCGTCGAGA # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTACTACAAGGCCGCAGAGCGGGCATTATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 1338909-1345409 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB900536.1 Thioalkalivibrio thiocyanodenitrificans ARhD 1 scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 1338909 36 97.2 35 .................................C.. ACCAAGCCCAACTAATCCGGCACCCCTACGGACAC 1338980 36 97.2 37 .................................C.. CGGGCCGGTGGCCGGTGACCTGCATGGGGTCGACGCG 1339053 36 97.2 36 .................................C.. TGTAAATCCTTGCTCCATCTCGGCTCTGACGATCAT 1339125 36 97.2 37 .................................C.. GGTGGAGGTGGCATTTATGGAAGTCTCCGGCCGCCGG 1339198 36 97.2 37 .................................C.. GCTGCCGGACGCCGGCCCGCGGGATGCCCTTGCCCTC 1339271 36 97.2 37 .................................C.. GCCTGCAGCTATCAGATCGCATCTGGCGCCTGGACCG 1339344 36 97.2 37 .................................C.. CGGACAGGCTTCCGCCTGGGTCGTTCAGCCGTGTCGG 1339417 36 97.2 38 .................................C.. CCGGAAGCCTGGCCCGCGCCATCAAGGGCTTCTGCCAC 1339491 36 97.2 36 .................................C.. AAACTCGCCCAGTACGGGCTGCATGTGACACAGCCG 1339563 36 97.2 39 .................................C.. TGGGCTGGGGGCACGAAGATAAATATTTCAGCCGGCCCG 1339638 36 97.2 37 .................................C.. AAATCGTGTTCACTGACTGGACCCGGAACTACATCTT 1339711 36 97.2 35 .................................C.. CTGCTGTCCCGGTATTCCACCGACAAGACCATCGC 1339782 36 97.2 36 .................................C.. GATGACTTACTACAACCCCACGGCCGAGGATCTCGC 1339854 36 97.2 37 .................................C.. GTTCAAGTCACTCAACCACATGCACGTGGACTTCTTT 1339927 36 97.2 39 .................................C.. GACGTTGGTGTTCGCATCGTCGGGCTCCTCCACCGCGAC 1340002 36 97.2 37 .................................C.. CGGGCGCTTGCAGTGGGGGCATTTCGGTGGCCCGGAG 1340075 36 97.2 37 .................................C.. ACCACCAGATCCCGACGCGACGTAGTTGCTGTGCGTG 1340148 36 97.2 36 .................................C.. CTTGGGCTTGGGCCTCTGATCTGCTTCTACGCCACG 1340220 36 100.0 36 .................................... CCCGCCGGAGGAACCGATGCCGAAGCCTGATGATCC 1340292 36 100.0 38 .................................... ACGTTTCGCCTGATTAAAGCACCGGTCTGGCGCCGCGT 1340366 36 100.0 37 .................................... CACCCCGCACCATGCGGGCATGAGCCGATTCCGCCCC 1340439 36 100.0 35 .................................... GAGCCGGTAGACCGGCCGTGGGTCCGCGGCCCGCA 1340510 36 100.0 36 .................................... GTCATCCTCCCGCTGCGCCTCTGCTATCCGTGTTAC 1340582 36 100.0 37 .................................... GCTACCACGACGCCGAATCCGCCCGCGCCCACTCCCT 1340655 36 100.0 38 .................................... GTCGTCCAGGTAGGGCAGCACCGCGCGCCGGTTGTAGA 1340729 36 100.0 36 .................................... GGGGATGCGCACCGTGCGCCGGGCCGGCGCGGCCGT 1340801 36 100.0 34 .................................... ACCACGCAGCCACCTCAATGGCGTCCACGTCGCC 1340871 36 100.0 35 .................................... GCCGTAGCCGTCTGCGCAGTTGCCGTGATAGATGC 1340942 36 100.0 36 .................................... CCAGACCCACCGGGGCATGGGCGCCAGCCTGCCGGC 1341014 36 100.0 36 .................................... GAAGCAACGAGAGCCAGGAGGACCAAGGCATGAACG 1341086 36 100.0 35 .................................... GTGGAGTGGACGGAATACGGCCTCGAGGCCGTGCG 1341157 36 100.0 35 .................................... GCGCTGTCGGTGCGCAGGATGAGGCCGATGTCGTC 1341228 36 100.0 35 .................................... GTGGAGATCCGGTAGATGAATGCCTTGACCAGCAG 1341299 36 100.0 36 .................................... GCGGGTCGAGTGGGTTTTTCATCCTTTGACGGTCTG 1341371 36 100.0 37 .................................... GGTACGTCATCGTGGGGATTTGGTTGTTGTTGAGCGC 1341444 36 100.0 38 .................................... ATGGTATCCGGCTGACGCCCGACAACGCGGTTGATCTC 1341518 36 100.0 36 .................................... AAGGGCGGCGCGCGCGCTGGAGTAGTTGGTCTTGGA 1341590 36 100.0 35 .................................... CACACCGCGGACTCCATCCGCGAGGGTCTGCGCGC 1341661 36 100.0 38 .................................... TCCGCGGTCGATGGGCTGGATCTGTCGGGGGGCACGGT 1341735 36 100.0 39 .................................... AGCATGATCCGGGGTCTTTCAATTGGCTAAGATCGGAAC 1341810 36 100.0 36 .................................... TATTCGGGCGGACTGATCCGTCGTCGCCAACGGAAG 1341882 36 100.0 37 .................................... GCGAGGTGGTCCAGAGGCCGGTGACCGTCTGGAGCGG 1341955 36 100.0 37 .................................... GATGCCCTGCTCAGTCACATAGTCGCCACCGCCGGCG 1342028 36 100.0 36 .................................... GAGTAAGCAAGCCGCCTACCGCGCCACAGACGGCAC 1342100 36 100.0 36 .................................... CTCGAAGCGCTGGCCGGTTTCCGGGTCCATCACTTC 1342172 36 100.0 39 .................................... GTGTCAAGATGCGTGCGTGCCGCATTCAGTCGCCCATAA 1342247 36 100.0 38 .................................... CTGATGGCTTCGGCAAGCTGTTCGCGAAACTCGTCGTT 1342321 36 100.0 36 .................................... CACTGCCATTACTGCGATTCCCCGCACTTGGCCGGC 1342393 36 100.0 39 .................................... GTAGGCCCCCCCGACCCACGTCGTCGTCGGCATGGCCAG 1342468 36 100.0 35 .................................... GTCTCGACCGGAGAGGAGTCGATCACCTGCTACAT 1342539 36 100.0 36 .................................... AGCGCACCCGCACGGGCCTGGGGGCTGCCCCGGAAG 1342611 36 100.0 37 .................................... GGAGGGTGACGTAAGTCATTGAAAAATGGCGCGCCCG 1342684 36 100.0 36 .................................... GCCGTGGTGTTCCGCGCCCGCTTCTCCATCCCCAGT 1342756 36 100.0 35 .................................... CAGACGCTCGGAACGGAATGGGGCAGGGACCTCGT 1342827 36 100.0 36 .................................... ACGCAGCGCGTACTATCATATGACCACGGTCGGGGA 1342899 36 100.0 40 .................................... CCGCGGCTGTCGGCGTGATGCTGATCATCGAGGGGATCAA 1342975 36 100.0 36 .................................... CGCGCTCGTCGGTGGGTACCAGGAGAGCTGCGTAAA 1343047 36 100.0 36 .................................... CGCGCTCGTCGGTGGGTACCAGGAGAGCTGCGTAAA 1343119 36 100.0 38 .................................... GTCAGCGCCCGGGGCCTGGACAAGATACTCCAGACCCT 1343193 36 100.0 38 .................................... GCGTGTCCCAGGGTTTCATCGGGTGTTTCCTCCTACGT 1343267 36 100.0 37 .................................... AATAATCATCAGAACCACCTCCCAATAGCAACCAGCC 1343340 36 100.0 37 .................................... CCGCCTGTGGCCTCGGGGAATGCCTCTGCCTCGTAGA 1343413 36 100.0 37 .................................... GCACCGACACATCACGCCGGTTTCCGGGTCGGTCCAG 1343486 36 100.0 36 .................................... GCCACGGACGGCGCCAGACAGGAGGATACAGATATG 1343558 36 97.2 37 ..................T................. CCGATGAAGTCGTGGCGCGAGCTGAACTGTTCCATGT 1343631 36 100.0 37 .................................... TCGGTTGTCAGCGCCGACCATGTGGGTGCAGTCGAAC 1343704 36 100.0 38 .................................... AGGTGCTGAACGGCGCGGGGCTGGTACGGGCGGGGGCT 1343778 36 100.0 36 .................................... GGCGCCCAACGGGGAGTCCGACAACTCTGTGCGCGT 1343850 36 100.0 38 .................................... AAGTCGGCCAGACGCCGAGCGATCTCGTGGCGATCACG 1343924 36 100.0 35 .................................... CCTATATCCTTGCTGCCGACTATGTCGCCGACCCC 1343995 36 100.0 36 .................................... TCTCTGGTGGACGCAGGCTGGCGAGCGCCACAACAC 1344067 36 100.0 36 .................................... GCGGACTCCGTCGGACTGGTTGGGCAGCTCAACGTC 1344139 36 100.0 37 .................................... ACCGATCGTGGACGGAGATTGATCTGGAGCATGCCGC 1344212 36 100.0 36 .................................... CATGAACCCCAGCGATTGGGGTGAGATCGAGCGGCT 1344284 36 100.0 36 .................................... ACAGACCACCCAACAGGGCACCACCGATCCCGCCCA 1344356 36 100.0 37 .................................... GGTATCTCAAGGATCGAGGTTTTGACGACAAGGAAGT 1344429 36 100.0 37 .................................... CCAGAGGCTTGGCGGGTCCCCTTTCTCCAGGGGGCAA 1344502 36 100.0 36 .................................... GAGACAATCGGGGATGTCACTGGTTCCGCATATCAC 1344574 36 100.0 35 .................................... GTTTCAGATCGACCTCGATCCCGATGGCGAGAAAG 1344645 36 100.0 36 .................................... GACGGCGCCGGACGATTACGAGCATATCTGGGGCGG 1344717 36 100.0 37 .................................... CCTCGCTGTACCACTTGACCACGCCGTCGGGGCCGAA 1344790 36 100.0 37 .................................... CCTTGTGATCTGCGATGCGCGCCTTGACCGCGGCCTC 1344863 36 100.0 38 .................................... ACCGACAGTCGCGCCCCTTTTCCCGCCGATCATGCCAC 1344937 36 100.0 38 .................................... GCCGCGTTCGATCACGAGATCAGCGGTCGGGCGCCGAC 1345011 36 100.0 36 .................................... CTCGCAGTGCGCGCGCTCGTATTCGAGTTCCGGGGT 1345083 36 100.0 37 .................................... CGCGGATCTCGCCTGGCGGGACTGGCCGCGGGACAGG 1345156 36 100.0 38 .................................... GACCTGATTCGGCGGCGCATCAATGCGGCCAGGGAGGC 1345230 36 100.0 36 .................................... TCATTAACATTTTCCAATAATCAAGAAGTTGCCGTA 1345302 36 100.0 36 .................................... GACACGAGAGCAGGCGCAGCGGCAGGCGGATGTGCT 1345374 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 90 36 99.4 37 GCTTCAATGAGGCCGTGGCGTTCTGCCACGGAAGAC # Left flank : ACCTTAGCCAAGGCAAGCCAGAAAGCCGAGGGCGAGAATAGGGCCTGAAAACGTCGTATCGACGACAACCATACCATCAGTAACCCAGAGAGAATCTCCTCGACGTCCCCGGTGGCTTCGATCATCACATAGGTTCCATGGATATCCGCGCGATAATCTCGGCTCATGTAGGAGCCCGGTCCTCCGGGCGATCCTGCCCAAAACCAAACCCCGGTCGTCCGGGCGAACCGATTATTGTCGACGCACGCTTTCCATTCGAGACGTTCAAGAATCAGAGAACCTCCTGGGCAGCTTCGCATCCTCTGTGCCCTCAATATGCTTTCGCCGGCACTAAGCCTTCCACAAGGTCTTGCCTTCATCCGCGAGCCGGTGCATACGCAACGGCGACGCCATGATGTTGCCAATGCAGGTCAGGCCGTCCAGATGGTCCAAGGGCAGCGGGAGTCATGATGTAGAGGGTATTGGGTAGCGTATACATGGCAAGGCGCATACCAAGGGGT # Right flank : CAGCCCTCGCAGAGGTGCAAACGAAACGGGGCCCAGAGGGGCGATTTTCGAGCACTCCCGACTTCCACACGAATCCATACATCGTCGGGCTCCTGCAAGGACCGGACAACCAGCATTTTAGTCCGAGTTTTCAAAGAGCTGAAGCGCTTCGAGCGCTGCCCGGGGTTACTCGAACCACAGCAGCACTCGAATGGCTTCGGCGCGCGCCACCATGACTCACGCCATCCACAAGCCTAGATGATGACAGGCTCTCTGGGAACCGGTGCGAAATCCTTTCCCAGGCTGACCACTCGGGGCGCAACCTTGTCCGCCAACCCCACGTCAAGGATCACGATGTGATCCTGCTCATGGTGGATGATTCCGTCCAGAAGAGCGATCAGTTCTGCATGGCGCTGCCGGCTCATGCGGCACTGGAAGACCGATAGCTGAACCCATTCACCGTAACCGCGCATCAAACGGAACACCCGGCGCCAACGCTTCTGGTCGCTGATGTCGTAGGT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGTGGCGTTCTGCCACGGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.60,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //