Array 1 255716-252566 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIPK01000003.1 Aliidiomarina maris strain CF12-14 contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 255715 28 100.0 32 ............................ TATCGTTGTAAGACCTAAGTCTGATGGTTTTT 255655 28 100.0 32 ............................ TTACCACCGCAGCACCAGAGAAGTGTGGAGTC 255595 28 100.0 32 ............................ ACTGACGCGATTCTTATCAACAAAGAATTAGA 255535 28 100.0 32 ............................ AACCGCTGACCAGTGTCGACTTTAATCATGTG 255475 28 100.0 32 ............................ TAGATAGGTTTCGCCATCTATCACTATTGGAC 255415 28 100.0 32 ............................ AATTTGGCGCGGTCGCTGCGTGAATATAAATG 255355 28 100.0 32 ............................ AAGCTGATGAAGGCATTAGGTATCACGTATGG 255295 28 100.0 32 ............................ CCTGAAGTCTAGGTTGCGAATAGTCGCTACGT 255235 28 100.0 32 ............................ ACAATGGCCAAACAGTCCACCAGTGCCATAAT 255175 28 100.0 32 ............................ ACCTTGGAAACCTTGCTGATTTCCAACATAGC 255115 28 100.0 32 ............................ ACCCAGCCAATGATTGGCTTGTGGGTTCCATG 255055 28 100.0 32 ............................ TCCGCGAGGATTTGGCCATTGCGCATTAGTAC 254995 28 100.0 32 ............................ ATCGCCGAAAAGATTGTGGAGCCCGCTTGTTC 254935 28 100.0 32 ............................ AGCAATGGTGCTGCTAATGCCAAGCCCCACTT 254875 28 100.0 32 ............................ ACTTGAGCCACCGATTCAACCAATTCATCAAC 254815 28 100.0 32 ............................ TATTTATCGACGAGACGTTTACAGCGTACAGC 254755 28 100.0 32 ............................ GGCATGGGCGGCTACACCGGCGGCATTGGCGA 254695 28 100.0 32 ............................ AAAACGGCACGCGAATGAGGGGTGGGGGGTGG 254635 28 100.0 32 ............................ AACCGAGAGAGCGCACGTTCCGGCGCATGACT 254575 28 100.0 32 ............................ TCGCAGTGGCTTAACGCCTTACGGCTCACCTG 254515 28 100.0 32 ............................ TCGATCAGGTTCTCAAGTATTTTGCGGTTGCG 254455 28 100.0 32 ............................ TTCTGGGGCGGCAAATGGAGCGCATGGCCAGA 254395 28 100.0 32 ............................ TGTTTGCTCATAGCGGGTAATTCTGGCCATGC 254335 28 100.0 33 ............................ CATTGGTGGTATTGGCTTTATAGGGCTGTGCTT 254274 28 100.0 32 ............................ TGCGTCATGGGTTGCTGGTAGCTTTAACGGCA 254214 28 100.0 32 ............................ TTGGATTTAATGACGATCAACAGCGGGATATT 254154 28 100.0 32 ............................ TGATACGCTTGAGCGTCGTCGACTACATCAGC 254094 28 100.0 32 ............................ TTTAATGACACGATGACATGACTCATGGTGTC 254034 28 100.0 32 ............................ TGCTGGGGTGATCCCGCAAGGTCGTCTATACG 253974 28 100.0 32 ............................ AATGAGAAACGAAACCCGCAAAGTATTTAACA 253914 28 100.0 32 ............................ ATGGTCAGGTCCTATCAGTGGTTTCGGTGCAA 253854 28 100.0 32 ............................ TACTGACCCAACTGATCTGGAAAAGAACTCTT 253794 28 100.0 32 ............................ AATTGCTTGGCTTTACCAAACAAGACCTGCAG 253734 28 100.0 32 ............................ AGCCGTCGAGCATGGCAGCAATGGGAGCGCGG 253674 28 100.0 32 ............................ AGATTGGGGCGACTATTTTTTCAATGCTAGTA 253614 28 100.0 32 ............................ AGATGAAGCGCGACACAAGCGCGACACAGGAA 253554 28 100.0 32 ............................ TCATCGTGGAGTTGGCTAGCTGGTACGCAGTT 253494 28 100.0 32 ............................ ACCAGTGGCACGGTACCGCGCATTCTGTGACG 253434 28 100.0 32 ............................ AAGCCCGCCCTTTGATGGGTCGTAACCAATCC 253374 28 100.0 32 ............................ AGCAAGGCAGCGCAGGTGTTCGATGCCAACGA 253314 28 100.0 33 ............................ TGCTGAATATCAGAGCGAGGCTAATACTGAGAG 253253 28 96.4 32 ..............C............. TACTCTGCCAGACGATGACGAGATAGACCGTG 253193 28 100.0 32 ............................ TGATAGAAAACCACATAGATATACGCAACGTT 253133 28 100.0 32 ............................ TGAAACTGAATACCGAGTATGGGCGCGCACGA 253073 28 100.0 32 ............................ AGTGAATCGAACCCTAGGCGCGTTATCAATCT 253013 28 100.0 32 ............................ TCTACGGAGTTCTTCGTGGTCGTAACCAAATG 252953 28 100.0 32 ............................ CTCCGAAGCATCCGTACAAGATAGCGCTTCTG 252893 28 100.0 32 ............................ ACTGAGTCTAAGTCATCATCACTATCTGAGTC 252833 28 100.0 32 ............................ AGCTGGTGAAGAAGTTCTTCCCCATGGTTACC 252773 28 100.0 32 ............................ CAACAGACCTTGCCAAGTACTCTTACGAGTGT 252713 28 100.0 32 ............................ CTCAAGCTTGCGCAACAGGCGGTTTACCTGCT 252653 28 100.0 32 ............................ ACTGCAGCGAGACCAGCACTATCACCAAGTCC 252593 28 85.7 0 ...T.........T........C.C... | ========== ====== ====== ====== ============================ ================================= ================== 53 28 99.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTTCGCTGATTATTGCCATATCAGCAGCATTAAGGCGGTACCAGAGCACACGAAGTTCGCATTGTTTTCCCGTAAACAATGTCAAACTAACCCTGAGCGTTTAGCTAGAAGGCGAGCCAAACGTAAAGGCGAAACTTTAGAGCAAGCAATGCAACACTTTGCAGGCTTCAAAGATGAGAGCTCAAAGTTGCCTTTTATCGCTATGGAAAGTTTGTCGTCTGCTAACGCCAATGGTGACGCCAATAAATTTCGTCTAATTATCGAGCAAAAAATATTACCTGAGCATCAGCCTGGCAATTTTAATTGTTACGGCCTTAGTCAAGACGCAACGGTACCTTGGTTTTAACCCTTAATTATTGAGTTAAACACCAAACGAAAATGCTCTTTAAAAAATCGAAATAAAAACAGTAAGTTACAACAAGACGTTTTTTGATAGGTAAAAATGATTTTTTGAACCTATCTGTCTGTTGTAACTTATTTTTTTGTCGAGAGTCTTCT # Right flank : TCTTGTTCGCTAAGTTTCACCTTCGACTAGCGCCTACTAGCATGCACGCCGCTCGGGGGGGAAACCGAGGTAATTGAGCTCCCCCTCAAGCAACGCCAAACCCAAATCAACCTACCCGGCGGTGAAACACCAACGAGTACGTGACAGGTATCACCAGTAGGGTGAGCAAGGTTGCGAAGCCGAGGCCGAACATGATGGTGACGGCCATGGCGGCGAAGAACTCGTCAAATAGCAGCGGTATCATGCCTAAAATGGTGGTGACGGCGGCCATGCTGACCGGGCGTACGCGGCTGACGGCGGCGTCGAATAGCGCGTCGCTCGCTGCTTTGCCACTGTCTTCCTCGATTTGTACTTGCTCCAGCAATACCACGCCGTTTTTAATTAACATGCCGGTTAAGCTAATTAACCCAAGTAGGGCCATAAAGCTAAATGGTTGGCCGGTGAGCAACAGCCCGAAACTGACGCCTATCACGGACAGTGGCACTGTGGTCCAAATCACT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //