Array 1 130478-133129 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPUN01000005.1 Eggerthella lenta strain 28B NODE_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 130478 33 100.0 36 ................................. GAGCGGGACTGCGCCGAGGCTGTCTACGACGCCAAC 130547 33 100.0 36 ................................. TCGCTCGCAGCAGTGATGCTATGCGTGCCCGAACTC 130616 33 100.0 32 ................................. CCAAGCAACAGGTCTCCCAAGCCGAGATCGAC 130681 33 100.0 36 ................................. CAGCGGCGCTGGCATGGATTATTGCGACTTGGGCAC 130750 33 100.0 32 ................................. AGCCCTCGCTCGCAGCCTCGTAGCGAAGCCTG 130815 33 100.0 34 ................................. AGCATCTCGAATTTCGCGGCGAGCGATTCGTTGC 130882 33 100.0 35 ................................. AAGGCCGCCAACGCCAAGTACAGCCTGGAGGAGAC 130950 33 97.0 33 ........T........................ AAAGCAGTCATCACAACGAGAGAAAGGGGCATC 131016 33 100.0 34 ................................. ACGTCGTGTCTGAGCATCGACATCACAACGTCTT 131083 33 100.0 32 ................................. ATTGCCGTTTTTCAAGGCTGGTAGCAAGCAAG 131148 33 100.0 34 ................................. GTGCCGGCAGCTCCCGCAGCAGCGGCCCCTGCGG 131215 33 100.0 33 ................................. AGGTACGCGCGCGCCCTTCTCGGTCTTGTAGTC 131281 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 131349 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 131416 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 131483 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 131550 33 100.0 35 ................................. CGCTCGCAGCATAACGAAACGTTGGCTACAGCCGC 131618 33 100.0 35 ................................. ACGCACTCGTAGACGTCGGCCGGGGTGTAGCAGTC 131686 33 100.0 36 ................................. AATGAATCGATCAAGCGCGCCAACGGCGAACTCACC 131755 33 100.0 34 ................................. GAAACCGTGCGCGACGGCGGAAGCAAGCTGGACG 131822 33 100.0 33 ................................. CGCGCCACAGAAGGCGCACCTTGCGGGTATCGG 131888 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 131954 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 132022 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCGGC 132089 33 100.0 25 ................................. AGGCCCTGTCGGCCCGGTCGGCCCT Deletion [132147] 132147 33 90.9 34 ...GGC........................... ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 132214 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 132280 33 100.0 35 ................................. ATGATGACCACCGACTCGTCCGCGGTTCCGTAGAA 132348 33 100.0 35 ................................. TAACAGACCGAAGCCCGTCCGGGCGGGTCGAATAC 132416 33 100.0 35 ................................. CATGTGTTGCGTCCTACCGCGTCACTGATGATGCC 132484 33 100.0 34 ................................. ATCGTGTGCGGGACGAACGACGACAAGCTGGACG 132551 33 100.0 34 ................................. GAGGACGGTGTGGATCCATTACGACATCACCGGG 132618 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 132688 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 132757 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 132823 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 132889 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 132960 33 90.9 36 ..T...T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 133029 32 93.9 34 ..............-.................C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 133095 33 75.8 0 .....GTT.A..T.....C.C..........G. | T,C [133099,133111] ========== ====== ====== ====== ================================= ====================================== ================== 40 33 98.6 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TGCGCGGCGATCTAGATGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGCG # Right flank : TCGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //