Array 1 11048-10646 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLI01000195.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 213 scaffold195, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 11047 36 100.0 37 .................................... ACATGCCTCCAGCTCCTTCGAGTTCAGCTAGTTTCAC 10974 36 100.0 33 .................................... CATACATTTGGTTCTTCTGGCTCTTTTTCTTGA 10905 36 100.0 39 .................................... GTTGACAATACCTGTTGTAAGAGCTGGCAAAATCACTTT 10830 36 100.0 37 .................................... AGTGTGGTTTGTAGAAACCATATTGGATTAGAGGAAC 10757 36 100.0 40 .................................... AATACGGGATTTCTAAAAGAAACCGGATATTCTATTTGCA 10681 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 6 36 100.0 37 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : TTTTGATAATGTATCAATTAAGTTATCTAAAATTTGACTAACCCAAGTGTTTTTTTCTCACTTGTGAGAAATCCGGGTTTA # Right flank : AATTAAAAACCTCCTGTATCCGTAACTTGGAGCAGGAGGTTATTTTTAATGACAACAAAGATTTAACAAAATGATGATTATTAATTTTTTCCTGATTTAAGGATTTTTATTAACTTCTTCCTCTTTACCATAGCGATATAGAATTAATTTTCCTTGAGAAGAACGACAGCTAACCCGCACTCCTTGAGTCACGCGAAAGTGGTCAATGTTTCCCATATTAGTATACTTGTCATACTGCAATCCCCCATGCTTTTTGAGAATAGCAGTATCACCATCAGAATCTTCTAAGAGATAAGAAACTTTAGCTAAAGTCTCTTGTAACTTTACCCTTGGTTGCTTCTCCTTTACCTTTTTGTAGTCAGCTTCAAATGAATCTTGATATTCTAAATTGAAGAAAGAAAGTAAATCTTCTGAAAGCAGATCATCTTTACACTGATTCCAAATTAACTGTCCCCAAGTCGAAAGTGTCATTTTCTCATCAATTTCTGCAAGCATAGCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 8010-7460 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLI01000219.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 213 scaffold219, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 8009 37 100.0 37 ..................................... CAGTAAGATTTAAAACTATGCAAGAGATGACTGTAGA 7935 37 100.0 35 ..................................... GTCGTCGGGGTCTGGTGGTTCATTGGTGTCATCAG 7863 37 100.0 38 ..................................... TGACAGTGCCAATGTCAAGCAGTGGGCTGGATCTCTCG 7788 37 100.0 35 ..................................... ATCGCTGAAGAATATCGCCAAATTGACTTGTGTCA 7716 37 100.0 37 ..................................... GTAAAGTATTGTACCCAGTAAAAAAGGGAATCTTAGA 7642 37 100.0 37 ..................................... AATCCAATTTCTAACAAACACTTATTTACTACATAAA 7568 37 100.0 35 ..................................... CTTGTTGAGCATCTGGATCGATTTCCACCGATTGA 7496 37 91.9 0 .................................GTG. | ========== ====== ====== ====== ===================================== ====================================== ================== 8 37 99.0 36 GTTTCCAAAGACTATTACCCCGCAAGGGGACTGAAAC # Left flank : CCATGCCGTTAGGCTTATCGCATTGGTCGAGTGTATTCCGATTCGCTCTTTGGAGACAGTCAAAAGTCTGTTGCAGTTATTGGGGAAGCTGAATCGGCCTTATTTAACGGCTGTGGAAGAGAAATTGTTGGGTTTGATTGAGCGAGAATATGGTGTTGGAGATTAAATCTCCGCAAACTCATAGACAATAATAAATACACATCTTATGATTATGAAATCAGTTTGATATTTGGCAAGTCGAAGCGAGGTCAAAAACCCTGGGGATCTGCCAAAATCGCCAGAACCTTGACAAGTAAATAGTTTCACAGTTTCAGTGTTAAGGGAAGTTGAAAATAGTCGCAATAAGAGCGGCTGAAATCGACCTATTTTTGAGGTTCGCCAAAATGCTTCCCAGGAAGCCTGCTCTGTAACAGTTTCAGATGGAGC # Right flank : GACTATCGGTTGCACGTAGAGAGTGAGTTCCTCAGAAAAACTCGTGGCAAGTGTCAAAAGCCAGTACCCGCCCGAAGGGGCATTGCGGGTAACTGCGATGTTTCAGAGCTAGAGGGTAAAATGCGCGACATCAGCAAGCCGCACAGTTAGGTGAAGCGCTAGGGTAAAACTAGACAGGGTTAACAGATGTGAATCCTCGTAGAGGCATCGTGAAGAGGAATTACCGAAAACGGCTGAGACGGTAAAAGGGGTAAAGTGATTCTGCCCAATCCTCAGAATCAGTAGACACCAAGAACCCCCGGTGTATAGAGGGAACCCAAGCTAGTTGCATCTCTCGCGTGTGATACGTAGGAACCCCAACGGGGTCTTTTAACTAGGTCGATGTCAAAAGTAGAGATTGGAGTAATCCAGCTTTAATCCCCCAGTGGGTGTAAGATGCCACAAGAAGCGAATGCTGCTATGTCGAAAGGCAACAGGAATAAATAACTGGGCAGATAGGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAAAGACTATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 13617-15234 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLI01000020.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 213 scaffold20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 13617 37 100.0 34 ..................................... AAGAAACAGTTAAACCTGTTGCCGCTATGCAATC 13688 37 100.0 36 ..................................... TTGGGATCTTCACTACCTCTAGAGCTAATACGACTT 13761 37 100.0 33 ..................................... GCGATCTATAGCATGGGGCGGCAAGAGTGGAAC 13831 37 100.0 35 ..................................... CCTTTGCTATCCCCTATATTCAGGGGGAAATTCAG 13903 37 100.0 35 ..................................... TAGTACCTATACCTCAAAAATCTCAAAATATCTTT 13975 37 100.0 35 ..................................... TTTGATTATTTCTACCAAAAAATAGTACTCAATAT 14047 37 100.0 33 ..................................... ACTACGAACTACTAGGTAGGCTTGCAAATTAAA 14117 37 100.0 36 ..................................... GAAAAGTACCTCAAACTTTCCGCTCCCGCGACGAAG 14190 37 100.0 36 ..................................... ATTGCTTTCGCCCTTCGGATGTATTGAGAATATTGC 14263 37 100.0 35 ..................................... TGTATGATGAAACAGGAATTAATAAAGTTCCTAAT 14335 37 100.0 34 ..................................... AAATCTAATCTACTCTTACCAGTTTTAGGCTTAA 14406 37 100.0 34 ..................................... CTCTCCCTTGCTAGCATTTCCGATGAAAGAAAGG 14477 37 100.0 34 ..................................... TTTCTCTGACAGAAATGTTTCTTATGCGATTAAA 14548 37 100.0 36 ..................................... TACCTCTATTAGGTAGTTTGGCTTGTTTAGATAGAG 14621 37 100.0 34 ..................................... CTAGTAGACGTTAATAAAACAAAGATAAGTACAA 14692 37 100.0 34 ..................................... TTTAATAACCAACGAAGACGAACCAGTTGCTGAG 14763 37 100.0 35 ..................................... TCCAATCATCTCCTAAATCAGAGAAGTATCTTCTA 14835 37 100.0 40 ..................................... TAAGTTGCTTTTGGATCTTGCTTGGTACACCGGGGAACGC 14912 37 100.0 33 ..................................... CCAGGTTTGGCACTAGCACCAATTACATCTTGA 14982 37 100.0 38 ..................................... TCAACTTATCCGTTGCTACTACAATACCGCCGACTACA 15057 37 100.0 32 ..................................... TTGACTCAACATCAGAATTCAACTGTTACAGG 15126 37 100.0 33 ..................................... CCATTTTTGAACTTTAGTACTATCATCCGCCTA 15196 37 89.2 0 ..........................C.A...T...T | A,C [15221,15228] ========== ====== ====== ====== ===================================== ======================================== ================== 23 37 99.5 35 ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : AAGTTTGAGAGGTAGCAATTGTTTTCGCTAGAAATAAAAGAAAGTCTCTAGTGGGAGCATCCCAAATATGCAGGGTTAATTTACATACGGAATTTTGACTTACCTCGGAGGATAAAAAACTAACCGCAAAGGACGCAAAGGACACAAAGGGAAGAGGATTTAAAAGGGTTTTTGCGTCAGTTCCGTATATTTTTGCCAAATTGGGATGCTCCCGTCTGTAGTAAGCTCATAGATCGTAAACTGCTTTGCAATCAGACCAGTTTTTTTGCCAAGTGCGCGAATGGGTAGGTGTTGGTGAAGAGGTTACTATAAAAATGGCTGAATTGCCGTGTATGTAAGAACTTGACGGCTGTAGAATCTTAAAGCCATCCGCGCACTTTATCTGGACTGGCTTTCAGCTATTTTCGGCTGGCACAATTGCCACTCCTCATGTTATGATTTTCCTATTCGCGCTATTGAACCTTGAAAACCAAATAACAAAAGGCTTTCAGATGCCAGCG # Right flank : TGCTAACTTTATGGCGATTTGGTTAAAGAATAAAATCTGTCAGAACGCATCTGAGTGCCATTTCGCCAAACTTCTACTTTTTCAGGGCTGACTAGATAATAGAAACTACCATTATCTGCTCGATATTTGCCTTGACCAATATTTAAAGCTGCAATTTTTATCGGCTTGCTTGGGTCTTGCTTCGACTGTCCAATATAAAATAACTGACCATTTTCTTCACAGACTTTTACACGAATATTTGCAGTCTCACCCTCAATGATGATAACTCCATTACACTGAATATTATTAATAGGTGCAAAAGCTATTGGAATTAGCTGTGAAGGTGAAGCTTGCTTTGCTATTGGGGGTGTCGAGACTGGGTGGTTAGGGTTATCAACTTGTTGAACTTTAGAAGCAGGAGAAACACTTGCAGTTAAGGATGTCAACAGACGAAGGGGATCAACTGCTATTTGACCATTTGGATGAACTTCAAAGTGGAGATGAGGGGCTGTACTATTGCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 14128-15604 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLI01000024.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 213 scaffold24, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 14128 36 100.0 39 .................................... AACAAAGCTAATGCGGTTTGGGTTAATCCTCTGGTTCGA 14203 36 100.0 30 .................................... TCCGGGTAATACTTTTAAATGAATTTTTTC 14269 36 100.0 37 .................................... GCTTAATTGGCTCTTGTAGAATTGAACAACGAGTTGT 14342 36 100.0 35 .................................... ACTAAATGTCCTAAATGCAAAGAAAATAAGTAGCA 14413 36 100.0 30 .................................... ACGAACTTCAGCAACTGGGGTAGCAACTAC 14479 36 100.0 37 .................................... TTTTGACATCCAAAATTCTAACCTGGAGATCAATTGC 14552 36 100.0 40 .................................... ATACCGCGCTCCGTTCTAAATTCAACTCCGCCATCGGGGG 14628 36 100.0 36 .................................... TCTAGCATATTCAGAATCTGTCAAACGAATCTGACG 14700 36 100.0 38 .................................... CTTCCTACTCTAGACTCTTTAAGCAAAATTGCTAAAAG 14774 36 100.0 38 .................................... TTTTTAATAGCATTACTTTTCTTTTTCGCTGTATTAAA 14848 36 100.0 37 .................................... TTTTTGTTTGCTCTGCACTCAATGGCAGAGCTGTAGA 14921 36 100.0 39 .................................... GTGCTAGTTTCTGTGTACTTGTTTCCGACTATTTGCTGT 14996 36 100.0 30 .................................... CGTAAGTTATAATTGTCTGTAGCATGAGGA 15062 36 100.0 34 .................................... AACACATTCTTGCCGCCTTATCACCATCATCATA 15132 36 100.0 35 .................................... AAAATGAAACTGTCTTCATCTTGAGGCTCGTAATA 15203 36 100.0 36 .................................... TAGTTGGTTGACCTTGTGACGCGGATGCAGATGAGC 15275 36 100.0 40 .................................... TTTATTGACTCATTTTACCGAAACCTGTTTGGGATAGAGG 15351 36 100.0 36 .................................... TAAAATTCTTACCATCAACCACGGTAGATGATATAC 15423 36 100.0 37 .................................... CCGCTAGCTCCCTTTGTAGGTTGTTTTTTGCAGTCAG 15496 36 100.0 37 .................................... ACGAAATTGCTTCCTCATTATTGCAACCAAGAAAGGA 15569 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ======================================== ================== 21 36 99.9 36 CTTTACATAACCACTTCCCCTAACGGGGATGGAAAC # Left flank : GTAAAAGCTGCTGTGAACAAACAAAAGAATCTAATTCCTACCCCAGTACCAACCAAACAGGCGATGTCCAATGACAAGTCGCTACCTGTCTACACAGTTAATCCTTCACCTGCTAATTTTGAAAGTGCTGAAATCACCCTTGAACCAACCCCCAGTCCGTCTATCCCTAACTCATCTCAAGAAGTTCTGTTGAAACAGCTGCGGGAGTATGGTAAGCAACGGGAGCAACTAGAGACAGGAAAATAAGCAATACAGCTTGACAATTTTAAGTAACATATTTTACTGTTTATACAGTGTGTTGCAACTCATCGACACCACTCATCAGAACCTTGAAAACTGCATAATTCCGTTGACTGGTGTCGATTGTTTGCACAGTAAGGGTTTCAGGCTGTAAAATTAGTCGCTTATTGATAATTAATTAATAGTTATTGAGAATTCAAAAAGTGGTGTCGATTTGGGGGTCTCAAACCCTTGCTCTGTAAGGTTTCCAAAAGGTAACT # Right flank : TATTTTCGAGACCTTTCTTTTCTTTGCTTCATTTAGGCGCATCTTCTGATTGGTATTGAGTACTCAAAACTGCTGAACCACTACAAGACCAGCAAGTACCAAGCGCCATACTTGGGCAAAGTCCCTATCGATATCTGGATCGCTCCATTCGGATGCGTGGGCTGGATGGTGAAAGCGAACTGTCGCTTGAAGGACTGCTTTAGCTGCTACTTGCGGATCGGTTACTCTAAACTCGTTTGTGGAAATACCGCTCTCTACGATCTGAGCAATCTGCCTAAGCAGTTCAGCAATGTGAGCTTCAACTACCCCTCGCGCCTCTTGGGTAATCGCTGAATAGGTTGCAAATAACTCTGGCTCTTTTAAGACTTTTTGACGTTTCAGAGTCATGAGTTGCTCAAACCATCGGTGCAACCGTTCTTTGGCGGAACCTGGCTCTTGGGCGATCGCTGCTAGCGGTGTGGAAACCCGATGCAGCCACCGTTCTGCCACTGCATCTCGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACATAACCACTTCCCCTAACGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 21429-22834 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLI01000077.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 213 scaffold77, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 21429 37 100.0 34 ..................................... GATAATCCTGTAGAAACTCCTGATAACACTAATG 21500 37 100.0 35 ..................................... GGAACGATTGGAAGTGTATCAAGCCGTTTAACAAG 21572 37 100.0 36 ..................................... GCAGAAGTTAGAAAGCTGTTGCCAAAGTGCGAGCTA 21645 37 100.0 34 ..................................... CCATCGTTTAACGCTCGAATCAGCTAATATTTGT 21716 37 100.0 38 ..................................... TTTGGCTTTTCTAGCTTTTCTAGGCTGTTCCACGGTTT 21791 37 100.0 36 ..................................... AATAGCTTTTGAAGAAGACGCGACCGCTATAGGTAA 21864 37 100.0 34 ..................................... CCGATCGCTTTACCTGAAAAACTGAGAGGCTTTG 21935 37 100.0 39 ..................................... GATACTTGACCGGATTGCCAGAGCTATCAAGAATTGGGT 22011 37 100.0 36 ..................................... CTTTCGCCAGCGCATTGCCTACAGAAGTTTCTATTC 22084 37 100.0 34 ..................................... AGCGCTAGTATCGCCGACTTCACCCACTATTAAG 22155 37 100.0 31 ..................................... AAAACTTTCTGCCGTTGGCTACTCCGCTTGG 22223 37 100.0 34 ..................................... TTCAAGATGGATACTTATTCATCGGACAGAACGA 22294 37 100.0 35 ..................................... ACATTAAGTGCAGATGGGCGAGAAGCGATCGCGAT 22366 37 100.0 37 ..................................... GATAATTTCTGCTATTACCCTAAGCTCCACCTGCGAG 22440 37 100.0 36 ..................................... CTTTACCTGGAGACGATCAATTTTGGTCTACCTTAT 22513 37 100.0 31 ..................................... TGGAATTTACACGTTTCAGATAACTCATCAA 22581 37 100.0 35 ..................................... ACTATCAATTATTCATCCAGTCCATCGCTACCACC 22653 37 100.0 35 ..................................... GATGTTTACGTCAGCGTTGGTGGGAGTTTCCGCGC 22725 37 100.0 36 ..................................... CCCAGAAGTTGCACTAGTAAAGTCCCTGCGCGGTGA 22798 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 20 37 100.0 36 ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : ACAGCAACTCAAGCACTCAATAACAGTACATTACCTTATATTGTCCAGTTGGCGAATTTGGGAATTATGGCCCTGGAAGTTAACCCAGCTTTAGCTAAGGGTGTGAATGTGCAGAATCATCGCTTAGTGCATCCGGCTGTACAAGAGGTATTCCCTGATTTGGTAAATTAAGGTGTGCAAGTATTAGGTAGGCGATCGCCTTTGGCGCACCGGAGGTGTTCGCTTATTTTAATAGAGGTAGCGATCGCTAACTAGACTAATTTTCTTGTCTTATGCGCGGATGGGTAGGTGTACAAAATCAGAAAGGGCAAAAAATGCCCGATGCTGCATCTATACAAGGTTTTCAGGGCACTAGTATTTTAAAACTATCCGCGCACCTTATGGGGACTAGCTTTCAGCGATTTGTATCTTGTGCTATGACTATTTGCTGTGTTATGATTCACTTATTCGCGCAACTGCACCTTGAAAACCAAATACAACAGGGCTTCCAGACCCCAGCG # Right flank : CGCTGTTGCGCCAAGGCGCTGTCACTCTTCTCGTTTCGTAGATTGCAATAGGGTAAAATGTGAAGAATCATTTCTATAACTGCTTATTTGACAATTGACAGAGATAATTTTTTTACTTTGATATTTGTGGATGCCTAAAGATTTGAATATGTTTGTTAATACTAAAGTAAATCTCTCATGTTTACCTGCTTTTACTAAGTCGAAGATATATAGAAATCTTGCGCCTGTAATATTCGGTTTGATATTACCAGCATTCATGCCTGGTGTTGCAGGGGCAGAGACAGTGATGCAAAAAGTAGCACGGACAGGAGTATTAACGGCTGGTACAAGTAGAGATGCTTTACCTTTTGCATACTCTGACAGTCAAGGAAAATTGATTGGTTATTCTGTGGATATGCTGACTTTGATCCAGAAGCAGTTAGAGAAAGAATTAGGCAAAAAAATTAAACTTGAATTAGTTGGAGTTACCCCAGCAGAAAGGATTCCTAAGATAATTAACC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 14540-15306 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLI01000085.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 213 scaffold85, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 14540 37 100.0 33 ..................................... TGGAAGCTCTAAAGTCAATGTAAAACTTCCTGA 14610 37 100.0 36 ..................................... GAGATCCGTACTAAGGGAGGATTGCAAGCCCACAAC 14683 37 100.0 37 ..................................... ACATTCATGCTACGCAGGCTGTCAGCGATATACTTCG 14757 37 100.0 35 ..................................... ATCTTGCAAGAGGCATCTCCAAATAAAATAGATAT 14829 37 100.0 34 ..................................... AAGCGCGACAATATCCCAGCGATTGCTAACTTCG 14900 37 100.0 35 ..................................... TTGCCCTGCTTATAACAGGGCTTCTTTTTTACTTG 14972 37 100.0 39 ..................................... CCGCTATTCCCAAGGCACAGAAAGGTTATGCGGACTCAA 15048 37 100.0 37 ..................................... TGGATCTGGATGCTTTGGGCGGACAGTGTAGCGGTTT 15122 37 100.0 37 ..................................... ATTAATACCCTTACCTTACAAAATTATCATGAATAGA 15196 37 100.0 37 ..................................... TGCACGGCGCTGGTTTTTTGAATGCCGGGAATTAGAG 15270 37 91.9 0 ...................T............A...G | ========== ====== ====== ====== ===================================== ======================================= ================== 11 37 99.3 36 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : CTTTCATTCCCCTTCTTTTTCGATCCCAATTTCGATGTAGAAGTGAAGCCGATTCAATTAGATAATATAGTGGCGAATAATGGCGATCGCTGGGATAAAGCTAACATTCATGATTTTCGCGGAACTTATGGCGATTATGTGTTGAATAAGGTGTCTAAGGTTTTTCCAGAATTGCGGCGAACAGTATTATAGAGTTTGAAGCCATTTTTTTTGCTGAGTCCCCTTTTGGTTAGGTTCCTGTATTTCCAATGCGCGGAAGGGTAGGTGTACAAATTTCACAAGCCCAAAAAAGTGCTTCTATCTCAACACCAGCAAGCATTTCACCCAATCATCGCCCAATTATCATCCGCGCAATCTCTGAAATGCTTACAAAAAGTGGGTTTCAGCCTTTAAACTTTCCTGGCACTCTTTCCAAACGAATTCTCTAATGCTATGATTGCTCAAGAATCGCGCAACTGCACCTTGAAAACTAAATACAGCCTGGCTTTGCGGCTTCCGCT # Right flank : GCCTTTACAGTCTATTGAACCTCTAGATGAAGTATCGGTAGAGTGAAGCGATCTAAAATTTAACCAGTGACCTATAAAAGGCAAATCCCTCTCTACAGGAGTGTAGAAAGGGATTTATGGGGTATTAATACCCTTTTTTTTTGACTCCTAGTTTAAATTATTTGCTTTATCAACTGCTTGCTTTAATTCTTCAAAAGTAATACTACCGTCTTTGTCTGAATCATAATTTACTAGTAATTCCTGGGGACTAGTGGTATTTGTTTCTGATGAGATGATTGCACTTAAGCCAGGACTTAAAAAAAGATCGTTAATGGAGACTTTGCCATCTCGATCGCTATCTAAGATATTAAAAAGAGATTGAAGCTCTTGCTCGGTTGTCATAAGTTTCTATCTGAATTACTTTTTCAATTTAAATTTAATATCTCAAAATCTTGACAAAGATGCAAGGATAGTGAAGACAGTCAAGTGTGCAAATGTAGTAAATTTAACGCTACCTAGTG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 1515-3681 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLI01000088.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 213 scaffold88, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================================================================================ ================== 1515 37 100.0 35 ..................................... AGAAGATTTTGAGTATTGTCCGATGCTGTAATCTA 1587 37 100.0 33 ..................................... TAGAAAGTTTCCAGGGTATTCAACGACTGACGA 1657 37 100.0 35 ..................................... TTTATTGTGGTAATTCCGGTAACTTGCCATATTTT 1729 37 100.0 34 ..................................... TCTTGTGCCGTGCAATCCCCCAAGGGTTGCTAAA 1800 37 100.0 36 ..................................... GTTTACTCTGATGGGAGTTAACAGTGCCAAGAGAGC 1873 37 100.0 36 ..................................... ATTAGCTCACGTTTTTTTCCCACTTTTCATGGATAA 1946 37 100.0 34 ..................................... AATTATGCCAGCAAATGCCCAACCTTGTAGGGTA 2017 37 100.0 34 ..................................... TTGGTGGTAGTCGAAGTAGTAACAAGCGAGTGCT 2088 37 100.0 31 ..................................... AGAGTAAGTTAGTGGGAAAACTATTTGGCAA 2156 37 100.0 34 ..................................... AGGTGTAATCTCCACATATCGTGTATGACCTAAC 2227 37 100.0 36 ..................................... TATCGATACAAGCTCTCCGAAAAGCTCTTGTATCGT 2300 37 100.0 37 ..................................... AGCAGCATTTGAAAGCAAGGTAGGCACTGCTCTTAAT 2374 37 100.0 36 ..................................... GTAGATAGCAACGACATTAGGGCTATTGGATTTAAA 2447 37 100.0 31 ..................................... CGGGCTGACCTCACTACTGCTAAAAAGACAG 2515 37 100.0 43 ..................................... GATAAGGCAGCGATCACAAGTCCAAATCTGGCGATAGCCACAA 2595 37 100.0 38 ..................................... AGATCGTGATGAGTAAGTGTTGAGTCTTTTGCGACGAT 2670 37 100.0 34 ..................................... ACGACATTGTGGTGCAATCGTGGAATACATTATC 2741 37 100.0 37 ..................................... CATAGATGACGGCATTACCTGGGATCGGCTAGCACAA 2815 37 100.0 36 ..................................... AATGCACCTTGGGATATTGCCTACATAAGCACTGGT 2888 37 100.0 37 ..................................... GCGAAAATAGCGGCGCGAGAAAGTGAATTAGCAAAAG 2962 37 100.0 36 ..................................... AATTTACCATTATTGTATTCAAAGGGGATGCGTACC 3035 37 100.0 35 ..................................... TTTTTTTTGGCAAGCTCCATTTATGCAATCATATT 3107 37 100.0 34 ..................................... CAGTTTTTATACCCGCAAAAACTGCTTCAGTAGA 3178 37 100.0 40 ..................................... ACTGCACTAGAAACGTAATCCACTTGTGCGATAAACCCTG 3255 37 100.0 33 ..................................... AGACTGAATTGCTTTCTCAATAAATACTGGTGG 3325 37 100.0 34 ..................................... TTGGTCTTGAATTTTGTCCATATATCATTACCAC 3396 37 100.0 35 ..................................... GTAATCACATTCTTATTATTAGTAAAAAAAGCAAA 3468 37 100.0 140 ..................................... ATTTCTTATGCATATATCCCCTTATAGCGTTTCTCGTTCACGTGAGGTACACCCGTAGGGGCACGGCACTGCTGTGCCCTTACACTTCGCGATTTAATCTTGTACCGCATGTGAATGGGAACCGCTATAAAGCCTTTTAT 3645 37 91.9 0 .........T.........................TA | ========== ====== ====== ====== ===================================== ============================================================================================================================================ ================== 29 37 99.7 39 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TGTCGCCAAGGTGGTTGTTGCGATAAATTTGCGGCGTGTTATTTCTTTCATCATCTCTACCTTAAATTGGCAAAAACTTTATTGTTGATTAGTCAGTACAGTAGTACGACAACTAGATATTACAATTTATGAACCAGTGTACCGTAATATTAGCTTCGTTTGCTGTCCAAGCTTTCTTTGCTCTGTGACTGTTGTCAGGCGAAAGCCGATGTATTGGAAAATATAGTTAGGTTTCTATCCGAATCAAATGCGCGAAAGGGTAGGTGTACAAATTTCACAGCCCCAAAAAAGTGCTTCTATCCCAATTACAGTAGGGCTTTCAACCCACTTGTCGCTTAATCCTCATCCGCGCAATCTCTGAAATGCTTATCAAAACACGATTTCAGCTTTTAAATTTTCCTGGCACTCTTTCCAAACGAATTCTCTAATGCTATGATTACTCAAGAATCGCGCAACTGCACCTTGAAAACTAAATACAGCCGGAGTTTCAGGCTCTTGCT # Right flank : ATAACAATTACCCATCATTAGATTGATATAGGAATCATATTTGATTTTTGAAGAAAATTAGGTATTGTAGGGTGCGTTAGAACGCAGTTCGTAACGCACCATTATCGAGGGTTTGGTGCGTTATGCTGTCGCTAACACAACACCAGTGACGCTACGCACAGTCGCTAACGCCCAAGTCGGTAAACCCACCCACACGACAGGCTCCCCTACATAATCTTTTCTCCAAATCAAACCGGATTCCTAGCAGATTAAGATACCTACTATTATTTAGGCGTTATGCTTGACTTCTTCGCCTGTATCACTTGCAAACTGCCGCCAGAATATAAAATTGGCTCACTCTCATCAAATCCAACCTCAGTTAATAATCTAGCCAAATCAGTTTTCAACAATTGCCAAGCTGTTTCCGTCTCAAACAACAACAAAAACAGTGATATCCCAGGCCAAAATATCGGATTTGTAGGAGCGTGAAAATCTATCAGCGTAAATACCCCTCCTGGCTT # Questionable array : NO Score: 8.91 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.33, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 65003-66059 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLI01000014.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 213 scaffold14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 65003 37 100.0 35 ..................................... AAGCCTAGCAAGGAAGTCACTCTTTAAAATTTCAG 65075 37 100.0 35 ..................................... GCCATTGTGATAACTGTAAGTAACGTGTGATGCTT 65147 37 100.0 34 ..................................... CAGCTTCGCCTACCTGTTTACTAAAAACCACATA 65218 37 100.0 34 ..................................... AAGAACGGGTACTAGCGATCGCTTGCTCTACCCC 65289 37 100.0 35 ..................................... ATTGTGTTGCATCCTATATATGGTGTATTTACCAG 65361 37 100.0 37 ..................................... ATAGCAATATGTTGCCAAGTATTTGCAACTATTGAGC 65435 37 100.0 34 ..................................... AGCTACATTTTTCAGCGATTGTATATCATTGCTT 65506 37 100.0 35 ..................................... ATTCTCGTGATTAGGAATTAAATATGGATAACCAC 65578 37 100.0 38 ..................................... ATTGCCGGAAACACCAAAGGACTATTTAACCCATTCGG 65653 37 100.0 37 ..................................... ATGGACAACTACGGCGATCGCGTGACAGCAGTTAAAA 65727 37 100.0 36 ..................................... ACAAAGTGCCAATAGTTACTGTACCAACGGTGCTTC 65800 37 100.0 34 ..................................... GGTAAGCAGTGCAAGGCATAACGCCGCACAACAC 65871 37 100.0 37 ..................................... CAAGCTTATACCCCAAGTATTCTGCGCTCGCTAATGA 65945 37 100.0 41 ..................................... ATAGAACAATCACACTTACCACCAACGTAAAAGCTACTTGG 66023 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 15 37 100.0 36 ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Left flank : TGTTCTCTCTGTTATTCATAGAATTAACAGATCTGATACGCAATTCTTCGCTGGAAAGGGGAACGAAAGAGGTTTTGATTAAAACAGCTTTTAGAGAGTTTGCTTGTGCAATAACAGACTTTGAAGACGTTGCCAAATAAAGTTGATCGTGGGGGTGCTGGTATTGGGTAGGCGTAGCCCAACCCAGGCATCGCCCTAGAGTCAGCTAAACTAATCGAGTAGGATATTTATATGAGTAATCAGCTTTTCAATGAGATTAGTTTTTTCGCTAAATGCGCGGCTGGGTAGGTGTTGGAAAAAGGGTAACTAGAAAAATGGCTGAATTGCCCTATATGCAACAACTTCAGAGCGATCGCATTTATAAACTATCCGCGCACCTTATGGGGACTAGCTTTCAGCCATTTGCCTCTAGCCAAATTCCGACTCCTCGTGTTATGATTTCTCTATTCGCGCAACCGAACCTTGAAAACCAAATAAGACAAGGCTTCCAGAAGCCAGCG # Right flank : CCAGTAGATTTTAATTGACTAAAACCTGTGTAATATATACTTTCCGTTGTCTTCACCGACTGAGAATCAGTGATGTCTACGACGGGCTACGCCTACGCACACTCGATTTAGCTTATAACCTGAGTTCAAGCCAGATTCAGTTCTCTTTAGATTTATATTTACGAATTAGCTTTTAAGTCGTCAATTGTATTGCGGGCGAATGCTTGACAATATTAGCTAACTCTTGCAATTGTTTTACTGCTTCAGCACCCTCCAACTTCATTAATTCGCGATCGTCCCACAATTCCATCCAAGTAATCCCGTAATCAGACACTACAAAACGAATCAGATGCTTTTCTCGCAGGCTAACCATGAATGAAGCACTCTTCATTTGGTCGCCGCACGTATAACACGAGGCAGAATATCCATGCTGCTCAAGTACAATTGTCAAGGCTTGCAGGTTCATTACCAAGTCTTGAACGAATTCTTGATGTTGTTGCGCTAATCTTAGAAACACTAGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 12377-11842 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLI01000152.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 213 scaffold152, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================= ================== 12376 35 100.0 35 ................................... TAAAAAATAACTGCTTGGACGTATCCAAAATATGG 12306 35 100.0 37 ................................... TATTAAGCTTCCTGTCGTTGTTCCTGAAAAATCGTCA 12234 35 100.0 38 ................................... TTTCCGCCACGCTCAGCTTCAATCCCTGCCGATAACGT 12161 35 100.0 39 ................................... ATGAAGAAACATATCAATAGCACGAGAAAAACTATATTT 12087 35 100.0 35 ................................... TATTTCTTGCTGGATACTTGGGCTTAGTTTTTCCC 12017 35 100.0 35 ................................... GGGATTAGTATTATCAACAGTAACATTCATTTTAC 11947 35 100.0 37 ................................... TTTAAGAGCATCAACATCTTTGATGTAACCAGACTGT 11875 34 80.0 0 ....TT-..............A........AT..T | ========== ====== ====== ====== =================================== ======================================= ================== 8 35 97.5 37 CTTTGGCTTCTATGAAGTCGATTAAAAATGGAAAC # Left flank : ATGGAAGAATTTCGCGCTCAAATTGTTGATTCGTTTGTGGCGTATTTGGTAAATAAAAAAATCTTAGATCCTGAAGATTTTACTCCTCCTGATGAACGTGGTGGTGTATACTTACAAGCAAGTGCGTTGAAGAAGTATCTCAAGCACTGGGAGGAGAAGTTACAAACCGAGACAACACATCCCCATACTGGTTACAAGGTAGCTTATCGTCGTTGTATTGAGTTGCAGGTGCGGGAGTATGTAGCTTGTTTGATGGGTGAGGTAGAAGTTTACCGCCCAATGGTTTGGAAACTGTAACCTACTATACTATTTGTGGGATAGACACAATGGCTGAAACCCTGATTCTTTCGTTCTATCCCACAATTTGCTCTCCTGGTAAGGGTTTGAGGTACTCCGGTGATGAGTTTATTGACACAATTTCTCATTTATTTGGGTGAAAATTTGCATCCCACAAAAAAGTGCTGTAGACTTAGCTCAGGGCAAGGCTTTCAAGCGGTAGC # Right flank : TGTAAGGCTCAGATCCCCGACTTCTTGAAGAAGTCGGGGATCTTGGTTTTCACGAATAATTTATAACGGCTATAAATTACAGATTATTAAGTACTCAGTCGGGGATAATATCTCCGACTTTTTTTATGCGCTACACACAAGTCATATAACTCATATACAAAGTCATATATAACAGCCGTATACACATATACGAACTCATATACCACTCTGAGAACATAGAGATAAGTAAAAAAGCAAAAGCAAAACAGCCTCTATCTTTTGACTTTTTACCTTTAACCTTTTACTTCATTTAACCTATGTCCACAATTTACATCACCGACAAGGATGCATTAATCAAAACTCAACACACTTACTTAAAAGTGTTTCATCAACAGCAACAACTAATCAGTATCCGTCTTAGCAACGTCAGTCAACTCATCATCTTTGACAACATAAATCTACCCACCAACATTATTAAAACACTGCAATTACATCACATTCCCGTACTCTACTTAACTCAA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTGGCTTCTATGAAGTCGATTAAAAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 31110-33170 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLI01000018.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 213 scaffold18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 31110 37 100.0 33 ..................................... GAAGGCTCTACAAGTGTTCAACCTGAGCCGTTA 31180 37 100.0 36 ..................................... AAGAGGCTCATTACCACATCTAACACACGCATTCTG 31253 37 100.0 36 ..................................... ATCGCCACCTGTGCTTTTAAGCCAACTGAGCAAGGA 31326 37 100.0 37 ..................................... GAAATGGTACGAGGGGAAGTCATCAGGTCTTCGTGAT 31400 37 100.0 35 ..................................... GATAAATCCATCTACCCTACCACCGACGATTAATC 31472 37 100.0 35 ..................................... GCAGTGCTTCCATTTCAGCCAGTAATTCGGCAAAA 31544 37 100.0 36 ..................................... CCAAAATCCTGGTTACGATCGGTGGCAAGCTGAAAA 31617 37 100.0 35 ..................................... GGGAATACTAGCTACTGCATAGGTGCCACCATTGG 31689 37 100.0 34 ..................................... TTTTACAGTGGCTTCAAATCTGGTGACAAATTCA 31760 37 100.0 35 ..................................... ATGGTTTTTGAGAAATCATCAACTGCTAAATCAAT 31832 37 100.0 33 ..................................... GGTTTTTGTCGACAACGACGGAGTAATATTTTG 31902 37 100.0 35 ..................................... TGCTGCCCCAATTGCTCAGGAGACATGCCAGCCAA 31974 37 100.0 34 ..................................... TCTACCTCATACCCCAAATACGTCGCCACCACGC 32045 37 100.0 36 ..................................... AACTCGTTCACGGGTGAAGAACTTCAAGCAGCTTAC 32118 37 100.0 34 ..................................... CCAGCACCCCTTCCACCGCCAGATGCTCCCCAAA 32189 37 100.0 36 ..................................... ATTCCCTTTGAGGATGTCGCTGGAACGGGTAAGCAT 32262 37 100.0 36 ..................................... GCAACTAGCGGCGTTGGTAGATTCATAGACTCAGGA 32335 37 100.0 33 ..................................... TTTTGAAAAAAACTTTGCAGATAACTTTTACTA 32405 37 100.0 41 ..................................... GGTTGAGCATTTCCTCAAGAAAAATGAACCAGGGAATTGCA 32483 37 100.0 35 ..................................... TAGGCACTGACTCACCACGCTGCAAGTATCCACGC 32555 37 100.0 35 ..................................... TTAGGCTATGTGTTCGTAAGGTATATGAACGCCAT 32627 37 100.0 36 ..................................... AAACGGAAAATGAGCTTTCCAACTATCAGGAATACT 32700 37 100.0 37 ..................................... ATTAATTCCGAAGTTGCTCCGGTTATCACATGGGCTA 32774 37 100.0 34 ..................................... GCTTCTAGAAAAGCTGCATATATGGAGGAAATGC 32845 37 100.0 33 ..................................... TTGAAAATCAAACAGGACAAATGAATATGAGAA 32915 37 100.0 38 ..................................... AAGCAAATCTCTGTTGTAAACTTCTACATCTTGTAAGG 32990 37 100.0 36 ..................................... GATACATCAAGTTATCGACCCCTTCGTGGTGCCAAG 33063 37 100.0 34 ..................................... ATCTGGCGGTCTTGTCCCCAGAAATTAATCAAAG 33134 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 29 37 100.0 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCCATTCTCAAGTCTTACGGACAATGGATGCAATTGAGTGTGTTTGAGTGCGACATCACTCCCACTCAGTATGCTAAACTGCGATCGCGTTTGGCCAAATTGATTAAACCCGACACCGATAGCGTGCGCTTTTATTTTCTCTGTGGCTGCTGTCAGGGAAAAATCGAACGTATTGGCGGAGAACAGCCACGAGACGAAACAATTTTCTTTGCTGAGTCTCCTTCTCGCTAGGTTCTTGCATCTCAAATGCGCGGAGGGGTAGGTGTACAAATTTCACAGCCGAAAAAAAGTGCTTCTATCCCAAGTACAGTAAGGCTTTCAGCCCATTATTTGCCTAATCCTCATCCGCGCAATCTCTGAAATGCTTATCAAAAAACGATTTCAGCCTTTAAATTTTCCTGACGCTCTTTCCAAACGAATTCTCTAATGCTATGATTGCCCTTGAACCGCGAAACTGCACCTTGAAAACTAAATACAGCTTGGGTTTCAGCCTCCTGCC # Right flank : CAAAAATTGGGAAAAGGGTGGGCTTAGTGCCCACCCTAGACCATTATTTAATTGATACTATACAGGTGCTTCAGTAGCAGTCTTACCAATCAGCATTGCAGCATTTTCCTCGCTTTCGAGGATACCGAATTCAATCAACAAATCTTCTAACTCTTCCATCTCAATAGGTGTGGGGACAGTCAGATTCTTGTTGTTGATGATCTTTGTACCTAATGTCCGATATTCATTAGCTTGGTTACTGTCAGGCGCATACTCGTTAACAGTCATGCGGCGCAATTCTGCGTGTTGCACAATGTTGTCACGAGGTACGTAGTGAATCATTTGGGTGTTCAAGCGTTTTGCCAGGGTTTCGATAAGATCGATTTCCCGGTCAACGTTACGGCTGTTACAAATCAAACCACCCAAGCGCACACCGCCAGTGTGAGCATATTTGAGAACACCACGAGCAATGTTGTTAGCAGCATACATCGCCATCATTTCACCAGAGGTAACGATGTAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 4036-5530 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLI01000176.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 213 scaffold176, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 4036 36 100.0 36 .................................... ACAAAGCAGAGAGAATGGATAAACGCATGATTTTAG 4108 36 100.0 34 .................................... CAATCATTGCTAACCAATTTCCTCAAAAAACTGC 4178 36 100.0 36 .................................... ATTGCAGTAACCATATCTTGCAAAATATACGGACAA 4250 36 100.0 40 .................................... GAAAGTACTCCAGCAGAAAAACCTATAGGAAGGTTTAATA 4326 36 100.0 38 .................................... TCTGGATTGTACCACTTTACAATTATGTTCGCTACATC 4400 36 100.0 35 .................................... CTAACATGTCATTTTCTTTTATTATTTCTGCTAAT 4471 36 100.0 38 .................................... ATTTACTCCTTGTTTAATTTTAGTTCTTAACCTTTGAA 4545 36 100.0 36 .................................... TTTCCTCTGCTTTCTCGGCAGTTACAGTTTTTCTGT 4617 36 100.0 34 .................................... TAAAAATTTGTACTTCCAATACCTATCTTCAATT 4687 36 100.0 36 .................................... AATCCACATGTCCAAGCCTCAAGTTTGATCACTCCA 4759 36 100.0 39 .................................... GAAGAGTCTGTGCGAATAATCTTATTACCCACAATTGAA 4834 36 100.0 42 .................................... ACGGGGGATTGCTGCACATACAAGTTTATAATGGCTTGCAGA 4912 36 100.0 35 .................................... GCATAGATGTCTGGGTAGCTTGAATTTTCAATTGG 4983 36 100.0 35 .................................... GGAAAGCCCTTTGGACGTAGGTGTCAGGTTGTGCG 5054 36 100.0 41 .................................... AAGTAATCTCCGAATACAATTGAGTTGATCGATTTGAGAAG 5131 36 100.0 37 .................................... TCATTCTCACCAATATGAGTGAAATGGTTTATTATGC 5204 36 100.0 39 .................................... GAAAAAGATACTTGTTGAACATTTTAGCTTACTCCGATT 5279 36 100.0 37 .................................... TATCTTTTGCATCTGCCATAAGTTAATAATTCAAAAA 5352 36 97.2 35 .......C............................ TTTATTTGCTCGTATCCATTGCTGTCTGAAATTAC 5423 36 97.2 36 .......C............................ CATCTTCCTAACTGCTTTTCAAGGTATTCTCTGTTG 5495 36 86.1 0 .......C......................ATC.T. | ========== ====== ====== ====== ==================================== ========================================== ================== 21 36 99.1 37 CTTTCCATAACCACTTCCCCTAACGGGGATGGAAAC # Left flank : AAGTGATTATCAAAGTGCGCGAAATTGATAACAAAGGTCGGATTAATCTCACCCGCTTGGGTATCCACCCAGATCAAGCAGCAGCAGCACGAGAAGCGGCGGCGGTGAATCGGTAACTCGATTTGGGATTTTAGATTTGATCTAAAATCCGCGATGCCTACTGTGAAGGCATCGCTGTTTGCTTCTCTAATTAGCTTCCAAACTGTTATAGATAAATTTACCCCGCTCACAATTGTTAATTTATTTATTAAATACTTGACAGGTTTAAGGTAATATATTTTACTGTTTATTCAGTGTGTTGAAGTTCATCGACACCACTCCTCAGAACCTTGAAAACCGCATAACTTCGTTGACTGGTGTCGATTACTTGTACAGTAAGGGTTTCCGGCTAAAAAATCCATCTCTTATTGACAATTTTATCGTATTTATTGACATTATTAAAAGTGGTGTCGAATAGGGGGTCTGAAACCCTCTCCTAGTAAGGCTTCCAGAAGTGAACT # Right flank : CTGAAACTCAGTTAAAACAAGTAATTCAACGCTAATTCATTATTGATATTATTCTGGCAACCCGTAGTTGAAGTATTTAAAAATACATTATTTGTCTAATTACAAATTGAGCAAATTACCCGATCGCAGCGACACAAAAAAAATGTAATTAAAAACACTTTTTCTTCTAATCAGTCATAATTTATGTAATTTGTGCAATTAATCTCCCGTCAAAAATATCATGGCTTTAGTTTCAACGATAAACAAACTGACATCAACACAAGTCCCTACACTCAATGATTGCAGTTCACAAAGCCTGCTCAACTACTTCCACAATTCTTGGGAACTTGAAGAAACACTCATGAAAAGTTTGATTGGGGAAGAAACTTTTTATCTGAACCCCGATCCTTTAAGAAACCCTCTAATCTTTTATCTTGGTCACTCAGCCGTTTTTTTCATCAACAAGTTAATTGGCGTTGGTTTAATCAAAGCTGGAATTAATTCCCAATACGAAACCCTAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCATAACCACTTCCCCTAACGGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //