Array 1 1521956-1522710 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020771.1 Microcystis aeruginosa PCC 7806SL chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================= ================== 1521956 35 100.0 37 ................................... CCTAATATCTTCCGCAATGGCAAGCACTTCTGGGTTA 1522028 35 100.0 36 ................................... CCTCCTTGCCATGGAAAGGAACTAGTGGTGGGGGGA 1522099 35 100.0 37 ................................... GGCAAGCATCCATGCTACCATCATTAGCAAGCACCGC 1522171 35 97.1 39 .............................A..... AGTCTCTACCTCTGTAACAACAACGGGTACCTCGGCCTG 1522245 35 100.0 36 ................................... TCTTTTTCGGTAGAGGCCTCTGAGGAAACCCTCAAA 1522316 35 100.0 38 ................................... ACTCTATCCTTGGGGATAAGAGCACTTGTTTCCCCCAA 1522389 35 100.0 36 ................................... CCAAATTGTTCTCCTGTGGGAGACAAAATCCACCAA 1522460 35 100.0 37 ................................... GTTTCATCCGTCATCCACCATACAATCGGATCGATGC 1522532 35 100.0 35 ................................... TTTTTCAACATTGTTTTAAGGGACCTAGGGTTAAC 1522602 35 97.1 39 ..................................A GATGTGTAGGGTTAATTCATGAATTGACCCTACAATTTT 1522676 35 77.1 0 T..AA........A..T...T.CC........... | ========== ====== ====== ====== =================================== ======================================= ================== 11 35 97.4 37 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : ACGAGGTTTATATTGGTAGCGCCGATTGGATGACGCGGAACCTGAGTCGTCGCGTGGAAGCAGTGACACCCATCGATGAACCAGCGATCGCCAAGGAACTGGAAGAAATTCTCGGCATCATGTTGTCAGATAACCGACAAGCATGGGAATTACAATCCGATGGCAGTTATATTCAGCGTCGTGCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCAAAGCTAGT # Right flank : CAGAATGCCAGGGATCAATCCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCGAGATTATGCGTCAGTGGGGACAACAATTTCAGAGGAACTTTAACCAGACTGAACTCGGCAGAATAATTTATGCGGGAGGAGATGATTTTTTAGGCATCGTTTATAATAGCCAATTTCCTGATCCACAACTCGACTCGATCGATCTCGATCGAGTTCTCCACTGGCTACAAACTCCTCATAAGTAGAGTTTGCTGAATAAATGTGAAATGTAGGCAAGGTCAGGGTTTTGTGGCTTTTCTCGTGAAACAGGTGCAAGATTTTGAGAGAATCGTGCTTCAAAACCTTGCGTCTTCATCGGCCCGCGTCCTGTAGGGGCGAAGCATTCGGGCAGTAACCTATCGGTGAAACCGTAGATTTTCTATCCGAATGCTTCGCCCGTACTTTTTCAGCAAACCCTAAGCAGCGATCGCACTTTCAAAAGACCAAATAATCACATTTAAAGG # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 1524835-1525521 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020771.1 Microcystis aeruginosa PCC 7806SL chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 1524835 35 100.0 37 ................................... GCGACCACTAGTCCGCTCACGATACCGAACGAATAAA 1524907 35 100.0 40 ................................... TTGACTTTATTCTGTTTAGGAAGGGTCAATTTTCCTTGCT 1524982 35 100.0 39 ................................... CCCAATAAGAGAACAAACCCCATTATAAAAATTGGGGTT 1525056 35 100.0 37 ................................... GAGAAGTTAGATACTTTTGCACTACCCCACACATGAA 1525128 35 100.0 36 ................................... GGTTTTAAACTCCTTCTCCAGAAGAATTGCGGAGAA 1525199 35 100.0 38 ................................... GTGGTATCCTGGCTAGCCACCGTAGTGATTTTCGCCAG 1525272 35 100.0 35 ................................... ATAAAGCTACATCGTCGCTGTTAGCCGCAACATAC 1525342 35 100.0 36 ................................... AAATACCTCCTAGCTGGAATGCGACTAGCGCACCCA 1525413 35 100.0 39 ................................... GATGTGTAGGGTTAATTCATGAATTAACCCTACAATTTT 1525487 35 77.1 0 T..AA........AA.T......C.....A..... | ========== ====== ====== ====== =================================== ======================================== ================== 10 35 97.7 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : ATTACGATTCATCAAGTTGGTCATCGTCGAGATATTTATTCTGATTAGTTTTAGTTTAATTACTTCCATTCCAAAAAATTGCTCCTTCTAAAAGCGATCGCACTCCTCCTCATCAAAATCTCCAAAAAAGTTGCTTCTTCCAAAAGTGATCGCTATTCCTCATCATCAAAAAGCGATGTCGTCCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATCAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGCTTTGCAAAGCTAGT # Right flank : CGATGCTTAATTAAGAAAAATCAATGAAAACAAAGATTGTTTAAAAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTCTTCAACAATCGAGTTTTCTATAGCTTTATGTCCAAATATATAGCCATCACCCTGACTGACGGACACAAGTGGGTCAAAACCTGACAAGACAAGGGTTGCCAAAAAGAAAAATATCTGGGTAGATAGGGAAAAAGCAAGAATCCCTACAAGATGAAAACCGAGAACAGAATCTTCTCCCAAGTTTATTCCTATCTAGAACAAGGAAGCCGATTTGTGGATAAAAGACATTTAACCGTCCTCAGTTGGATGGTGACAGCCCTACTCAGTAGTCAAAGTCTCAATCAAGCCAGATGGGAACCCTTTGTACAAAGC # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 1732180-1731195 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020771.1 Microcystis aeruginosa PCC 7806SL chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 1732179 36 100.0 36 .................................... CCGTGATATTCAATGGGGGGCGTCTGGGATTTTTAA 1732107 36 100.0 36 .................................... TCACTACTAATGTGGCATTGTTTTTATGGCCTTTTG 1732035 36 100.0 34 .................................... CCAGCCGTGAACACGCAGCCATGGAGCAGCGTCA 1731965 36 100.0 40 .................................... TCGGTGAGCAGTCTGTGGATTTCTTGTTTGAGGCTTGGCA 1731889 36 100.0 36 .................................... TTTTGTAATACTGATAAATCTATCAGAGAATCAAGA 1731817 36 100.0 38 .................................... TCAGCACAAGAGTTCGAGTTAAAGTGGTACGAAACAAA 1731743 36 100.0 36 .................................... CTAGGGCATGGACACTTTGGCAATTGGCTAAAAGCC 1731671 36 100.0 41 .................................... TAAAATTGCCTCAGCTAGGACGGTTTAACTGGTATGTTTTC 1731594 36 100.0 36 .................................... CCTTACAGCGTAAAATCGATAAACAGAGCAAAACTC 1731522 36 100.0 39 .................................... TAGATTTAATTCAAGAATTAGCCGATAAAATACTGGCAT 1731447 36 100.0 35 .................................... CGAAGCCATAAAGTTCAAGACTCGTAAGAGCGAGC 1731376 36 100.0 36 .................................... GCTTTTGGTACTCAGCAATCATTCTTTCTGGATTAG 1731304 36 100.0 38 .................................... AGGAATTTTTGGTTGTCACTCGTTTCAATCCCTAATAA 1731230 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 14 36 100.0 37 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : CTTCAGCAAACGAACCTGAGTGATCGCACTAATTCCTAGAAGGCTTAACGCGACAATTTATAGCATTTTTATCGATTTTTGTCAAGATATATTTGACACAATTTATTAGAAAAAGGGTTTCTAATTAAAGAGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGGGCGAATGCAATTCGCCCCTACAATAATATTATTATTATTGTGCCAATGGTAGGGGCGCATCGCGTGCGCCCAGAATGTCCTAAGTAGGTAGGCACAATTATTTGTAGGATGGGTTAGCGGTAGCGTAACATAATCGGGCGTTGGGTTTCATGCTTCAACCCAACCTACGTTCATTTTATATTTAATTCCACCCACCTACTTATAGATATTTCGACAAAATTGAAAGGCAGAAAAAGGGTTTCTAAAAGAAACCCTTTTTCTA # Right flank : AGTACCCCTTGGAAAGTCTCATCGAGAGGGGAAGACAGACCCCCAAATCGACGCATCTCCAAAAAGGTGGTCCTGGGGGGGATAAAAGTCCCGATACCAAAGGGTAGAACCCTGACTGGGAGAGCAATCGACACATCTAACCAGAGAATCGGGGTTTTAGGTCGGGGAGGGGGTGCATCGATTTTCAGTCAAGAGTTAGGGGACAAGCTAGATGATGTAGAGATTTGGGGGTGGTTGAGGAGGAGAACCTCCCATCACCAATAATCTAGAGACAGCTTCTTCGGAAATCCCATAGAAGCGCACATCATCCTCTTGAGGATTGACCCTTTCTACTACTTTAGCGTACAGTTTCCGCCTCTCGATGTGTAATTAATTTTGCTTAAGTAATTATCTGTAATTAAGTAGCTGGTTATAATTAAATTAAAAATGGATTTTAGGTTCGATCCCCCCTGCCCCCCTTGATCTATCCATTAGTCACATCTTTCTTAACATAAAATTTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 4 3565203-3559316 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020771.1 Microcystis aeruginosa PCC 7806SL chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================== ================== 3565202 36 100.0 41 .................................... GCGAGCTTCTAGTAAAGAACGGAAGTTAATTCTTTTATACT 3565125 36 100.0 37 .................................... AATTCAGCAACTTGGCTTTCAAGTTGGTTTACTTCTG 3565052 36 100.0 36 .................................... CATAAAATCGGGAGTGTTTTCCATGTTTTTAGAAAT 3564980 36 100.0 37 .................................... TGGCAAGTTACCCGGAGAGTGGTAATCTGTCCCTGAA 3564907 36 100.0 38 .................................... CAGAAAAAGAAAAACACATTGATCAGCTTAATGATAAT 3564833 36 100.0 42 .................................... CCATGATATTAAAGCAATCGCACCTCAAGGGGATAAATTAAC 3564755 36 100.0 45 .................................... AGTAAAGTCGCCAGACATAACGGGGACTTTGACAGAACTCTCTAC 3564674 36 100.0 35 .................................... ATTTAGCTTGACACGGTTTGAGTTTTGTGTTACCA 3564603 36 100.0 37 .................................... ACTAAGGCTCTTTTATGGATTTTTAGAGCGTCATATA 3564530 36 100.0 36 .................................... AAAATCATTAATGTTCTTTATCAATCTGGAATTTAT 3564458 36 100.0 38 .................................... AAATTCAGACTCTTCTTTTTGAGGCTCAAATCTGTTAT 3564384 36 100.0 41 .................................... GTCTATATAATTATGTCTTGTGGGAAACTTGGCAGTAAAAC 3564307 36 100.0 36 .................................... TTGAGGATCATAATCAATGTGTATCATTTGACCTTT 3564235 36 100.0 41 .................................... TACACAAAAATCGGAGCAAATAATAAAAGAATTAAATACAA 3564158 36 100.0 36 .................................... ACGAAGGCTATGTTACTACGTATTTCGACACTAACA 3564086 36 100.0 38 .................................... AAAATCGGGAGTGCTATTTTCCATGTTTTTAGAGTAAT 3564012 36 100.0 35 .................................... AGAGCGCATGCTAGAGGATGTGGCCCTGTATTTCC 3563941 36 100.0 41 .................................... TTTGGATTTTGATTTTGGTTTTGGTTCATGATTCTCCTTAT 3563864 36 100.0 42 .................................... ACGCCTTGCGTCATCTCACCAATCCAACGAATAGCGCTCCAA 3563786 36 100.0 36 .................................... TCCAGAAATTTGACCTCGACCCGTGAAGGTAGTTGG 3563714 36 100.0 41 .................................... TAAAAAACATCGATAGGTTCATGATTGATGCCAATTACCCC 3563637 36 100.0 37 .................................... GGATTTGAATGATTCGTACACCTTGATAAAATTTTGA 3563564 36 100.0 37 .................................... AACTCTTCATAACGCCCGTCTTGTTTTCGCCAATCAT 3563491 36 100.0 40 .................................... ATTAATGGCATCAGAGCAAGGAATTATTATAGACGAAAAA 3563415 36 100.0 42 .................................... AGTCTATCTACCGTTAAACGATGGAAAGAAAGTGTAAAAAAT 3563337 36 100.0 37 .................................... ACAGTCCATTCTTTTATCTCCGCTAAATTGATATCTT 3563264 36 100.0 36 .................................... TGGTCAAATCGCTGATCTCGTTGTCTATCATCAAGC 3563192 36 100.0 37 .................................... AATGGAAGCATAAGGTAACTCCAAATTAAATACTCTA 3563119 36 100.0 38 .................................... AAACCCGTCAGGTATATCAATTTTAGCCTGTTCATCGA 3563045 36 100.0 39 .................................... GTGAGTGCATGGAAAAAAGAAATCAAAATCCCTGTTTCC 3562970 36 100.0 41 .................................... TTTTGCCTTTTGCCGCAATATATCAAGGTTGCCTATAAATT 3562893 36 100.0 36 .................................... GGGTAAAGCCACCCATGCGTGTGTTGACCAATGTAA 3562821 36 100.0 36 .................................... ATCTTCCTGTTTGGTTTCGCCTGTGAGTAGTTCGCA 3562749 36 100.0 37 .................................... TAACTGCGGGCGCTCACAATCAAACAGAGAATCGATC 3562676 36 100.0 36 .................................... TCTTGGTAATAGGTAATAGGAACGAGGAGAAGCCGA 3562604 36 100.0 38 .................................... TCATTTGATTTTTCCTCGTGTGTTTTTTGCTGATAACT 3562530 36 100.0 36 .................................... GCGCGAGTGCCATTTTCTTGAATCTCTTTTACAGAA 3562458 36 100.0 38 .................................... TCGCCAATTAGTATAAGGCGATTAGCTGGTATATCTAG 3562384 36 100.0 41 .................................... ATGGATATTTAATAATTGATACAGTAGAGGCTTTTTTGTCA 3562307 36 100.0 39 .................................... AATTCTTCTACCCGCAATAATAGCGCTTCGATTTCTAAA 3562232 36 100.0 39 .................................... TCAGCAAAGTCATTGACATCCATAAACCACTCTTCCCAT 3562157 36 100.0 36 .................................... TTGAAAAGTTGTCGTCAATCCTGAAAAAGGAGCATT 3562085 36 100.0 36 .................................... TAGTTGTAGCGTAGCGGGCAACGTTCGAGTAGTTGA 3562013 36 100.0 36 .................................... TTGTTTTTCTGAAATAGTTTTGCCTAATTTTCTTTA 3561941 36 100.0 40 .................................... TTCTCCTGCATTCTCGTTAGACATAGAAACACGGGGGAGA 3561865 36 100.0 38 .................................... GTATCTAACTAATCTCTATTCCGTTACTGTCAGCAAAA 3561791 36 100.0 39 .................................... CAGCAAAGTTTTCTGGTAACTTAAATTTAGGTTTTTTAG 3561716 36 100.0 35 .................................... AAAACTTGCCTAATTCGTTCTTTACCTATTCTTAA 3561645 36 100.0 40 .................................... GATCGCGAAAATGAAAGCCGCCTAAGCCTCTACGATCAAG 3561569 36 100.0 37 .................................... GTGGTGGGACAAATGGCTATATGTGGGGGAGATTTTT 3561496 36 100.0 35 .................................... ATAACAAAATGATATAATTAATGTGACAGATTAAT 3561425 36 100.0 36 .................................... TGATGGCCCTCACCCACGCCGCCCTATCCGTGGCGG 3561353 36 100.0 39 .................................... TTTTTATTGATGGCAAAAGAGTATTTATTTTTATCGATC 3561278 36 100.0 35 .................................... TGATCCGCTTCCCATTGGTGGCCGCAATTATCGCA 3561207 36 100.0 38 .................................... CTAATTAATAAATATACAGAAAATAGCAAACTAGGCTT 3561133 36 100.0 35 .................................... GTCCCGTGATTTTGGCGATTTCCGAGTAGGTTCGG 3561062 36 100.0 38 .................................... CCAAGTGCGATTAGTAACAATTTCTTCTTCGGTTTTGG 3560988 36 100.0 36 .................................... TGGAAAATTTGTGACAAAATGGGATACATAATAGTC 3560916 36 100.0 37 .................................... AAAAGCGACAAAATACCCTAGGTCTTTGACATAAATC 3560843 36 100.0 35 .................................... CATTTGCCACCTGCCAAAAATTGATTAGTTTCTAA 3560772 36 100.0 40 .................................... AGTATAGACCCGCATCATAAGAATCCCGGCTATATCCGAT 3560696 36 100.0 38 .................................... TTTTGTCCTTTGGCAACCATAGTAAAATTGCCAGACAT 3560622 36 100.0 47 .................................... CTAAAAGCGAGATTTGCTTTTGAATTAATCCTTGCTTGGCTTTGTCA 3560539 36 100.0 36 .................................... ATTCTTCGGGTTTTTAGCCCGCAATCAAACCAGTAG 3560467 36 100.0 38 .................................... CACACACACAGTACAATGTTCACTCCGGAGTATATGCA 3560393 36 100.0 38 .................................... ACCTTCCCATTTTCCCACAAATTCACCATTAGGAGTTA 3560319 36 100.0 36 .................................... GGGAAGGGGTTAAATATACCTATGGTCAAAGATTGC 3560247 36 100.0 42 .................................... TTTGTTGGTGTGAGTGTGGCTATTAGTCACGGCCGCATCAAT 3560169 36 100.0 40 .................................... TGATCAGTTAATAATCAATTAAACAATCTTAACGCAATCG 3560093 36 100.0 36 .................................... TAATCAGGATTAAAATCCTCCTCCTGAAGGATTTTG 3560021 36 100.0 42 .................................... TCTCGAAAATAGAAAGCAAGTTTTTCTCTGTTAAGATAGTTA 3559943 36 100.0 37 .................................... TTAAAACCTCGTTGTTCTAAAACTTTATTGTACTCTT 3559870 36 100.0 42 .................................... TGTTCTGTATTGAGCCACAAAGGGTCAAGGGTTACGGATACC 3559792 36 100.0 36 .................................... TGTAAGATTAAATAACTCTACTACTATGATAACCAA 3559720 36 100.0 37 .................................... TAGGTTCCTTTCCGCGCCTCATGGAATGCAATAAATT 3559647 36 100.0 38 .................................... AATCAATATCTAAAAATAGATGTTGTTTGTCAAATAAA 3559573 36 100.0 37 .................................... TGAAGAGGGGGAAAATTTAGGAGTAATCGGCGATTTA 3559500 36 100.0 40 .................................... ACTACTTAAAACTCTTGCCATGTCATCGGGTCGGTTGATG 3559424 36 100.0 36 .................................... TTTTCGGCTAATTTTTTACTGCACTTGTAGCGATAA 3559352 35 77.8 0 .............T-...C....GC.....CTC... | GA [3559343] ========== ====== ====== ====== ==================================== =============================================== ================== 80 36 99.7 38 CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Left flank : AGTTTTCAATACCTACCTACTTAATCATGTTATTTTATGTCATCGCCTATGATATTCCCTGCAATAAAAGACGTAAAAAAGTGGCTGATTTGCTGGAAGGATACGGCCAACGGGTTCAGTATTCAGTTTTCGAGTGTGTTTTAAGCAAATCTCTATACAATCAGTTAAGAGAACGCCTGCAAAAGCAAATCAAAGAAAACGAGGATAGTATTCGATTTTACCCCATCTCTGGCCATACTTTAGCACAAATAGAGACTTTAGGCGGTGTCCCGCTAACTAAAGCGCCAAGTTCTACGATCATCTGATTCGGTATCATCGACTAGCGACCGACAGGGGTGGGAGCAGATAACCTCGGTTTCCGGTAAAATCCCTCGATCTACCACAGGATAAGGGTTTTGTGGTTTATGGGGTTGACTGCGCGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCCGAACCCCAATCCTGTTCGGACGTTTGCCCACCGGC # Right flank : AGACGATTTAAATGCGCGGGCAGCTTATCCTATATGGTAATGTTTAATTATATTCCCACAAAAGTTGCTTATGTCCTTACCTGAACTCCCTCTTCATCTTCAATTAACCCAAATGGTTTCGGGTTACTGGCTATCTCAGGCCATCTATGCTGCGGCTAAATTAAGTCTAGCCGAGCATTTAAGCAAAGGAGCGAAATCCTGTCAAGATTTGGCCTCCCTAACTGAGACTAATCCTGCTGCTTTATACCGACTGATGCGAGCATTAGCTAGTGTAGGAATTTTTCAAGAAACTGAATCTCAACAGTTTATACTAACTCCCTTAGCCGAACATTTATCTAGTGACCATCCCCGGTCAGTAAAAGCGACAGCGATTATGTTAGGAGAAGCCCCCCATTATCAAGCCTGGGGAAATGTGTTACATAGTATTAAAACGGGACAACCATCCTTTGATGATGTCTTTGGGATGGGAGTCTTTGAATATTTTCAAACCCATCCCCTAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 5 3920831-3915922 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020771.1 Microcystis aeruginosa PCC 7806SL chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 3920830 37 100.0 36 ..................................... AAAGAGGAAAAAGAAGAAATATTAACCCCTAGCAAT 3920757 37 100.0 38 ..................................... ATATTCTTTTAAGACTTTCCGCGCTTTCGGTGAATCGA 3920682 37 100.0 35 ..................................... ACCATCAACGGAACCGCAAGATCGATCGCTACCCC 3920610 37 100.0 40 ..................................... CGCCGGAAGCTATGGGTGCTGATACCCTTAAATCCCAATC 3920533 37 100.0 36 ..................................... TATCAAGGGGATTGAGGATAAATTAAATAAGGTAAG 3920460 37 100.0 36 ..................................... GTTGTAATAATATAGTAAAGAAGGAATAACAACAGT 3920387 37 100.0 37 ..................................... ATCAAACGCGGTCGATGCTCGATCAATGTCTTCTAAA 3920313 37 100.0 36 ..................................... AATCGCACAATCAAAACCATAGCCGATCCTAATATT 3920240 37 100.0 34 ..................................... TTTTAGGTGATTTTTTAGGTTGAGATTTAGGATT 3920169 37 100.0 35 ..................................... CAAGATGCCGTTTATGGAAAAGGATTTTATCTGAC 3920097 37 100.0 33 ..................................... ATAACACTCCTGAGCGCATCCGCCAAGCTGATG 3920027 37 100.0 33 ..................................... CCACTAGGAAACTCAACAGAATCGCCTACTTTA 3919957 37 100.0 34 ..................................... CAGAATCTCTCTCAGATAAGGAACCCGACTCGTT 3919886 37 100.0 34 ..................................... TGGTAAATTATTTGCTAAACTTGTAGCTGATCTT 3919815 37 100.0 35 ..................................... TCCCCGCCAGTGACATCCCGACAAGTGCAAGTAAA 3919743 37 100.0 39 ..................................... TATTTCTGGAACCGACCAGAAATAGAATTCATCAGCCGC 3919667 37 100.0 35 ..................................... ATCGATGGAATTGGGGATGCGATCGAAGACCCGGA 3919595 37 100.0 36 ..................................... CTAAGTATTGGACTGCGGCCTTAGCACTCATCCCCA 3919522 37 100.0 34 ..................................... TCGCTCCGAAATCTTTGGAGCCACAATTATCGGA 3919451 37 100.0 36 ..................................... TTCACTAACCCATCGATATAGGCAATAAAATCAAGC 3919378 37 100.0 34 ..................................... TTCCCGTATCCCGGTTCCCCCCAAAAAAGCCCTA 3919307 37 100.0 36 ..................................... TCCGACGCACCGCCACCTCAGCCAAAGGAAGATCGG 3919234 37 100.0 35 ..................................... GTATTTAAAGCCTTAGATTCTATAGATTCTATGGA 3919162 37 100.0 35 ..................................... ATGCCCTTTGCATCGAAACAAACAAAACTCACTTA 3919090 37 100.0 36 ..................................... CTCGACTGTTTTCACTACCTGAGCTTGGGCATTGCC 3919017 37 100.0 34 ..................................... TTTTACAACTCTTTGCATGGCTTAAAACCTAAGC 3918946 37 100.0 39 ..................................... ATCGGAGGTTTATCTGCTAAAAGATTTATAATCTTTATT 3918870 37 100.0 34 ..................................... CTTTTTTTATCAGCATACGGGATGGGATATAGCC 3918799 37 100.0 34 ..................................... CTCCTTTTGTGAAGGGATCAATTGATTCAAAGTG 3918728 37 100.0 34 ..................................... ATCAATTTACTCCTTTTAAATATTAGCTTCTGCC 3918657 37 100.0 35 ..................................... CTGTTCCTTTTCAATTGCCTATTCCTTCTCGTAAG 3918585 37 100.0 40 ..................................... AGACAATAGCCCATGTCAATGTCATGTGTTATTACCGAAA 3918508 37 100.0 35 ..................................... AAATCGTCAAACTAAGCGAAGAGAAGCAAATACTA 3918436 37 100.0 34 ..................................... ATTGAATACGATCCCATTATTTAGTCCCTCAAAT 3918365 37 100.0 34 ..................................... CTAATAAAAAAGGTATTCCAATGAGGCTACCGGC 3918294 37 100.0 36 ..................................... CACCTCCGGTAACGGGTGAGTATATTGGAGCTTCTG 3918221 37 100.0 35 ..................................... TTGATTGCTATCATCAAGGCATGAATGACAACCTT 3918149 37 100.0 37 ..................................... AGTAATCAGTGAGTATTAAGGAGTGAGCAGTAAACAG 3918075 37 100.0 37 ..................................... GGCCGGTGGGGGGGCGAGCGAGCCGCAGACTGCCCGC 3918001 37 100.0 35 ..................................... AACTATTTCTAATTCTTTCCCCAATGTTAAACTGG 3917929 37 100.0 34 ..................................... AAGTATGTGGGAGAATCATCTTTGAACGTTTGTA 3917858 37 100.0 36 ..................................... ATGTAGGCATCTATTTGGGAGACGGTGAGTATATTC 3917785 37 100.0 36 ..................................... AGTTGCTCAAAGTATTCTTCTTCAACATTCTGGGGA 3917712 37 100.0 35 ..................................... GAATCAAAATCAAAGATGCCAAAACTTTCCCAAAA 3917640 37 100.0 35 ..................................... GTGATTGAGGTGTAGGCAGTTCCCGCCCATCTAAC 3917568 37 100.0 34 ..................................... AATCTTTGCCGCTCAACCCCCTAATAAGCTCCCT 3917497 37 100.0 45 ..................................... ATGGCTTCGGCTCAAACCGGAAAGACAGAAGCGGCGCTGAATACG 3917415 37 100.0 35 ..................................... AGGAGCAATATAGGCAATATTACCCCTGATATCAT 3917343 37 100.0 36 ..................................... AGAGCATATTCGCTATTTTCGCTAGGGAATGTTAGG 3917270 37 100.0 34 ..................................... TTGATTTGATAAATGGCGATTTCAATTTTCTCGA 3917199 37 100.0 35 ..................................... TCGCCGGTAAAGCCTTCCTCTACTTTTTCAATAAA 3917127 37 100.0 34 ..................................... GCGTCCCGGTTTCCCTTCTTTCCCGTCGCGTCCC 3917056 37 100.0 34 ..................................... TCTCCTTGTTCCGCCAATTCCTGGCAGATTTCTT 3916985 37 100.0 35 ..................................... GAAGAATTCAATAGGAAAATAAGGAAAATACGACA 3916913 37 100.0 36 ..................................... CAAAATCGAGCTAGGCCGCCTCAGTGAGGCGCAAAT 3916840 37 100.0 37 ..................................... AGCGGACAAATAAAGAGCGATCGCCTCATCGAGAATA 3916766 37 100.0 37 ..................................... ATGTAAACTCCGAGCAACTGATTAACAAATCAAGCAC 3916692 37 100.0 35 ..................................... TAGTTAAGTGGATTGTTACGGGAGGTAACATAATT 3916620 37 100.0 39 ..................................... CCTTCCGGCCCGGAGACAAATCTGGAACCTATTTCGGAA 3916544 37 100.0 38 ..................................... TAGCGGGGAAACTGGGATTACAATAAATTAAAGACATA 3916469 37 100.0 33 ..................................... AACGGCTTTGTAGCTGGCTAGACAAGATTGATT 3916399 37 100.0 35 ..................................... CACTTAATAGCCAATCAACAAGTTCAATCTGTCTT 3916327 37 100.0 39 ..................................... AACGCTTGATTAGGGTTCCAGCCAGCGAAATTATTCACC 3916251 37 100.0 36 ..................................... TAGAACAAGCGCAGTGTTGTCTTATCGAATTATATG 3916178 37 100.0 34 ..................................... CTTTTTCTTCTAATTTCTGGAATACAGGATAAAA 3916107 37 100.0 40 ..................................... ATAGCTAACCTGTTCTACTGGATTTTGAGGTTTATTTATG 3916030 37 100.0 35 ..................................... GTCTGTTTACCATTCTTAAGATTTGGGAAGTTATC 3915958 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 68 37 100.0 36 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TTTGTTGTCAGTTACGATATTTCCGACGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCGATACCCAGTACGCTAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTCTGCGCCTGTTGTCGGGGTAAAGTGGAACGTATCGGTGGTGAGTTACCCCGGGATAATACGATTTTTTTTGTTTAGCTCGGTTGCGCCTCGGAATAGCTGTAAAAATCCTTAACTATTATCTGGTGGCTGGAAAGCTTATGCAATATAGATTCGAGATGATTTTCCTTTCTAACGCGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGGTCTTGAAGAACTGGGTCACTTGCTGTACAATAGATTTATTGCGGGTGCGGCGCATACGAACCTTGAAAACCCCATAGCGTATAGCTTTTACCACTGGGCG # Right flank : TGGAACTTGAAACCTTCTAGTCTATTAATTTCAAAATGAGAATTGCTGTCAGTGAGTTTATCGAACTGCTTGCGTCCAAAATATCCTATAAATTAGAGGAAGTATAAGCTAATTTGTATTGATAGTAAATCTGTTTTTAATAGTATGAGCAACTCTCAATCGCACGCTAAAAACCTTCTCCCTTGTTCCTTCTCCCCACTTCTCCATACCTATTACCTAGCATTATTAGTATTCTATAATACCAATGCTTAGGAAACTATAAAGAAAATCCCAAGATTAGGCGATTCCCTTGGCGAAAAAGGCTATAGTAGCATAAAATCCGTAATTTGATCCACAAAATTGTTATGACAGTTACCAATAGACAAGAGCTAGAAGAACTGATTCAACAGGTGAAAAAAGCTCAACAACAATTTGCCAACTATAGCCAAGAACAAGTAGATCTTATCTTCAAAAAAGCGGCATTAGCAGCCAACAACGCTCGCATTCCCCTGGCTAAAATG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA //