Array 1 178106-177806 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGKH010000004.1 Enterococcus durans strain 4928STDY7071647, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 178105 36 100.0 30 .................................... AACCTACTTCATACCAATTTAAACCAAAAA 178039 36 100.0 30 .................................... AGCAAAGTGAAAGCTTTTTTCATCGCAAGG 177973 36 100.0 30 .................................... TAGTTTTCTATGATTGTACGTGTATAATGT 177907 36 97.2 30 .........T.......................... AAAAATCCAACAATAAAAACTATCGAAGGT 177841 36 91.7 0 ..........................T......GT. | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 97.8 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : AGAAGTAAAGCGAAAGATCATGGTAAAGGAAACCAAATCGAAGGACGTATTTTTGAAGGGCAAAAAATGGTCGTGATCGAAGATCTGATTTCAACTGGCGGAAGTGTACTAGAAGCAGCAGAAGCTGCTAAACGTGAAGGGGCGAATGTCTTAGGTGTGGCTGCTATCTTCACGTATGAATTACCAAAAGGAAAAGCAAACTTTACTAATGCGGAAATGCCATTATTGACCCTTACGAATTATTCCGTGCTGATCGAAGCAGCACTAGAAGAAAAATACATTGATGGAACAGAATTAAACCTATTGAAGGAATGGAAACAAGATCCTGAAAACTGGAAGAAAAACTGATTGCTTAATATCTGTAAAAAATATTTTAGCCTCAGAAATAAAATGGTATACTAGTGTTAAATAAACAACAAATAAAGAAGTATTCAAGACGAAAGTTTTGCTATGGACGAGTAGCTCAGTGATAAATCACGTAGAAAAATTTTTTCTACGAG # Right flank : AGCAACTGTTTTTGGGTAGTGTTATTTGAAAATACGATATACGATTGGTAGAGACTAGAGTGCTTTCTTCTGGTTTCTATTTTTTTATATAAATCGGGAATGATTTTGTTAAAATTATAAAAAAATCAATGAAAATAAAACGTGTTATTTGCAAATTTTAGTTATTTAATGGTAGGATTATCGGAAAAAGTATTCCATTAAGGGAGGTCTATTTATGGGATTGAATGAATTTATTTTAGGATTGAACAACTTAGAAAAAATCACGCGGGCTCCTGGTTTCTTTAAATTCACCGAGCATACGGTAGCGGCACACTCGTATCGAGTGGCTTCGATTGCTCAAGTTTTAGGGGATATCGAAGAAGTAAATGGTCAAAAGATCGACTGGAAACTGCTCTATGAAAAGGCACTGAACCATGATTATACCGAGCGCTTCATTGGTGACATCAAAACTCCAGTAAAATATGCAAGTAAAGAGTTGCGGGGGATGTTGCAAACGGTAG # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 80052-79884 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGKH010000013.1 Enterococcus durans strain 4928STDY7071647, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 80051 36 100.0 30 .................................... AATACTTCTTACAAACAGACGTTAAAGTAA 79985 36 100.0 30 .................................... TGAGTAAAGAAGTTTCATTCGAAAATGAAT 79919 36 80.6 0 ..........................TC.AG.TG.T | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 93.5 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : GTTGAAGTAAAATCCATGATCGACAAATTGACCACTACGATCAGCGAATTGATCGACTACGAGTTATTAGATCATGAATTGGACTTGGAAAGTGATGAAATCACGATATTGGAACTGTTTAAAGCGCTAGGTGTAAAAATTGAAACGCATAGTGATACCATCTTTGAGAAAATGTTGGAGATATTGCAAGTATACAAATATCTCTCTAAAAAGAAATTACTAGTTTTCGTCAATACATGCGCTTATTTTACTTTAAAGGAGCTATTGGAGATACAAAATTACATCTCTTTGTACAACATGGATGTTTTATTTCTTGAACCACGTAAAATTGAGGGAGTCCCTCAAAGAGTTTTAGATAAAGACTATTTTTTGACATAAAAACTATGCTAAAATGAACTTAAGAACGAATGACTTGAAGCAGTCATTCAGCATTCAAGACGAAAGTTTTGCTATGGACGAGTAGTTCGGTGATAAATCACGTAGAAAAAATTTTCTGCGAG # Right flank : GAAGAATAGATGACCGAGGGGTTGTTTATTCTTTTTTTCATATAATTGGACGGCGATGCTTTCTGTTAGTAACATAAAGGAGAAGGGTGGTTGGGGATATGTTTGATTCAACGTTGATGGTTTGCTTGGATTGGCTGATGACGATTTTAAATCTTGCTTCGATCATTATTTTAGTGGTCGGTGTTTTTTTAGTATTAAAAACGTTGTTTGATTGGCGGACTTTGAAGAAAGATTATGGACAGCGAAATAGTCGCAATGCAGAGATTCGCAAATTGTTGGCTAGTTATATTTTATTAAGTTTAGAAGTTTTAGTGGTGGCAGATATCATTGAATCTGTCATCAAACCAACTTGGACAGATATTTTAAAACTTGCTTTGATTATTTTGATCCGTACGATTATTTCATATTTCTTGAATTTAGAGATTGAAGAACAACAACGAGCGAAGGCGGGGATGACAGATGAAAGCTGAGATGATCGATGGATTGGCTCCTTATTTGGA # Questionable array : NO Score: 5.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.23%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //