Array 1 2737-125 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIHW01000050.1 [Ruminococcus] gnavus strain RJX1128 RJX1128_50, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 2736 32 100.0 36 ................................ TTGGCATAATAAAAGCACCCATCAACTGGATGCCAA 2668 32 100.0 35 ................................ CTCATACTCCGGACACTCCACACAATACTCATACC 2601 32 100.0 39 ................................ ATAGACACAAACAATATCAAGTCCTTTGAGATATCTATG 2530 32 100.0 34 ................................ AATCAAATTGAATTGTCAACACTGAATTTCAAAA 2464 32 100.0 34 ................................ AATCGTGTACTCAAACGCATCCAAGCTGTCAATG 2398 32 100.0 33 ................................ AATTTGCTCTTGACTTTACGCCTCTTAGGGCGT 2333 32 100.0 33 ................................ TTGTCGGTAAGTCCGGTGTACTGGCAGAGGGTG 2268 32 100.0 34 ................................ GACTTCGCACAAAATGATAGCCAGCCTGGATATT 2202 32 100.0 33 ................................ AAATATTTTTCTTTAATTTGCTTTCTTCCGGCT 2137 32 100.0 34 ................................ ACTATTCCGGGTTGGGAAGAGCACCAGAACGCGG 2071 32 100.0 33 ................................ GAACACAGCAAAAGTGAGTGATGTCTGGCAGTG 2006 32 100.0 34 ................................ ACGGCTCTTGCATAGATCGATACACCAAGAGGAG 1940 32 100.0 35 ................................ TATAGTCAGATTCCCGTTAATGAAATAGTGTCGTT 1873 32 100.0 34 ................................ GGACGTAAGCTCTTTGTAGTTTGTAAATACCGTC 1807 32 100.0 33 ................................ AGGTGTATCAACCAATAGATTTGGAATTGCATT 1742 32 100.0 35 ................................ CAAAAGGCAGCGATCAGCAACCCGAGTACAAAATC 1675 32 100.0 34 ................................ AAATGGTTAAAGCAGAGATTCTGCAAACACAAGT 1609 32 100.0 33 ................................ GATATCCAGAATCACATTTACTAGTCCGAAACG 1544 32 100.0 33 ................................ AATAAGCGATTGGGAAAACAACAAGAATAAACC 1479 32 100.0 34 ................................ TGGATTACTGCATTCTTGTCAACAATCAAGAAAT 1413 32 100.0 34 ................................ TCAGAAGCCCGGTATACCCTTGCCCCGGCCGGAG 1347 32 100.0 35 ................................ TGAATGCATCCGGCGCATGAACCCGGAGACTCCAA 1280 32 100.0 33 ................................ CATGATAATCACATCAGGAAGAATTGCTTTTGC 1215 32 100.0 34 ................................ TCACTACCTCCTGATATACGGCAGCCTGTATGTC 1149 32 100.0 34 ................................ ATGTACCCAATTCCCGGAGTAAAACCATTCCACC 1083 32 100.0 36 ................................ GAAATTTATAGAATGGTCTTTTGAAAAACCGCATTT 1015 32 100.0 35 ................................ TTGTGAATCTTTATTGTCATTTGTTTCCAACTCTC 948 32 100.0 34 ................................ TGAGGACATCGAAAAGATGGTAAAAACCACGCTG 882 32 100.0 35 ................................ TACCAGTCTGTCCCACTTTGTTATTGGGCGGTCGG 815 32 100.0 33 ................................ TCCCATCACTATAGCAATCATAAAAACTATCTA 750 32 100.0 34 ................................ AGGGCAAAAAAATCACAGACGTGGCTATCAAGGT 684 32 100.0 34 ................................ AACAGTGCTGTGAGTGACTTCATTTCCCGATTGC 618 32 100.0 34 ................................ TGTGATATACTATTTTTAACCGAAAGGGGTGATA 552 32 100.0 33 ................................ GATTAGAAAAGATAGATACACGCAGACAAGATG 487 32 100.0 34 ................................ TCGTTTAATATTTCGTATAAGTACAACTGATATT 421 32 100.0 34 ................................ TGTAATTTTCCCGGTAAGCTGTGATACTCCTGTC 355 32 100.0 33 ................................ GTATCTACTCCCCATTTTCTTAAGCAGTCTTCC 290 32 100.0 35 ................................ TGGACTTATAAGTTGTATACCCGTAATCTTCCCCT 223 32 100.0 35 ................................ TCTTAAATATGCTCGTCTTAATAAACATGATGCTC 156 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 40 32 100.0 34 GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT # Left flank : CCGGTATTTTTGTGGAAATGAGGCGAAAATAGGTATGTTAGTGCTGATTACATATGATGTAAATACAGAAACAGCAGCTGGAAAGAAAAGGTTACGCCAAGTGGCGAAACAATGTGTAAATTATGGTCGGCGAGTGCAAAATTCTGTTTTTGAATGTATTCTGGATAATGCACAGTGTGTGATGCTTAAGGCAAAGCTAACAGATATTATTGATGAAGAAGTAGATAGTTTGAGATTTTATTATTTGGGAAATCAATATAAAACAAAAGTAGAACATATTGGTGTAGACAGAGGAATTTCGGTGGATGGAATTCTTATTATGTAACTGGGGTGCGGATGATAAGCAAACATAAAAATGCTGGGAGATTCGCACCAGAAAAAATGCACAATAATTAGTTGAAGAGGTGAAAGTTAGAGAAATGAGATGAGGAAAAGAGAATGATATTGGTAGAATTGAGTAATATTAAAGAGTATAAAGCCTAAAATTAGGTAAAATTGCT # Right flank : TAATAGAACTTCGTATGTCTTCGGAAAATGGTTCTAGTATAACGAATATTAAATAATTGCTATATTAAATTGATACTGCTTCCTCTTCACTGATTTCATCCATTTTATACTTCCAGTGATAAACC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.80,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //