Array 1 168686-162379 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGLK01000005.1 Bifidobacterium asteroides strain ESL0199 Ga0133552_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 168685 32 100.0 34 ................................ AGGGACAAGCCGAGCTTTGTGGCGAATGATGCCA 168619 32 100.0 34 ................................ CCTTCCCCGGGATTAAAAAAGCAGCCTTGCACAC 168553 32 100.0 34 ................................ CGTTGATATGATAGCCAAGAACTTCGATACAAAG 168487 32 100.0 34 ................................ ACCCCATAGGCCTTGTACACCAGGTCAAGCCACT 168421 32 100.0 34 ................................ CTTGTGGCGTTTGCCGAATCCTGACAGATATATC 168355 32 100.0 33 ................................ TATCAGACGCAAGGGGCAAGCTCCTGCTCTCTC 168290 32 100.0 34 ................................ TGAGGACAGATACACCAAAAAGGAAATCGAAGAC 168224 32 100.0 32 ................................ CGGAACATGAGAGAAAGGATCGATGTCATGGG 168160 32 100.0 34 ................................ GACAGAAACGCCCCCGGGGTGTATCTGACCGATG 168094 32 100.0 35 ................................ CAGCGCAGGACCGGGTTGCCGCCATGCTGGAAGAG 168027 32 100.0 34 ................................ CCCGCGACCTTTTTGATGCTGTTCAGAGCGTTGT 167961 32 100.0 35 ................................ CAATGCTGGTGCAACGCCAGCCGACGCGGCCAAAG 167894 32 100.0 34 ................................ ATCTGCGACGAGTTGCACGTGTACAAGACCCCGG 167828 32 100.0 33 ................................ TTGAGGGCCTCCGTGTAGGTCTGCGCCTGCGGT 167763 32 100.0 33 ................................ GCAAGAGCGTGGGTGTGGACCTATACACTACAG 167698 32 100.0 34 ................................ ATCTAGGGCTTTTGGCACGTATCGTGCTGAGCAT 167632 32 100.0 34 ................................ TACTAAAATTCAGCGCATAGAACTGGTTTATGTT 167566 32 100.0 34 ................................ GGATCGTCAAGCCTGCCGTACAGGTCGTCCAGAC 167500 32 100.0 34 ................................ CAGAGGCAATAGCCTACTGTTCTAAAGCGGATAC 167434 32 100.0 34 ................................ ATGCCGGAAGGGCTGTCGCCGTTGTACACCAATG 167368 32 100.0 34 ................................ CTGAGCCTGATTTGGAGTGCACTTGGTATCACGA 167302 32 100.0 34 ................................ TGCGCGTTGAACTGCTCAACCTTGTCGGCCATGC 167236 32 100.0 35 ................................ GCGCATCCGGCGGCTGGACACTGTCTTGGTGACCC 167169 32 100.0 35 ................................ GAGACTGTCCCGAGCGTACTTCATAAGGTCTGCTA 167102 32 100.0 34 ................................ CAATTGTATGTCAGAATGGCACTGTCCGGCGCAA 167036 32 100.0 35 ................................ TTCACAGGCGTGTGGGATGGGATCACTCAGGGTGT 166969 32 100.0 34 ................................ AAACGCTGGACCTACTCTATCGGCTACCCATGTC 166903 32 100.0 34 ................................ CTGCACGATCCGGCCACTGGCAAGGATTACTGCG 166837 32 100.0 34 ................................ TGGCCGACGACTCCTACCAGTACGTCAAACAACA 166771 32 100.0 33 ................................ CGGCGTGCTGCTGGCATGGTCAAGGCAGCCGGT 166706 32 100.0 34 ................................ GTATCTACTTGCTTTTTGCTGCTCATTGCTTATC 166640 32 100.0 34 ................................ TTTATGTGCTACTTACTGTAGCACGCTCAGTCTG 166574 32 100.0 34 ................................ GGCCTGTTCCTTGCTGATGGTCGGATCGGGAATC 166508 32 100.0 34 ................................ CTGACTGGTGCATTGGTCAGATCCATCCGGCCGG 166442 32 100.0 34 ................................ TTCAGCTGCTTGATCGCTATCCGGTTCAGCTTGA 166376 32 100.0 34 ................................ TGCTTCCGGATGGCAGATGCGTCTTCTACCAGCT 166310 32 100.0 33 ................................ GCATACAAGGGAGACGTTGTGCTCCAGAAGAAC 166245 32 100.0 34 ................................ CGGTCCAAACTGGAAACCAGCTATGAGCATATGA 166179 32 100.0 33 ................................ TATAAGAGCAATGGCCTTATCCTTGTCAGCCAA 166114 32 100.0 33 ................................ CACGGTGCGTGGGATAATGTCGTCGGCTGGCTT 166049 32 100.0 34 ................................ TCAAAGGCGGCAGTCGATAGGATCGTCGGACTGG 165983 32 100.0 34 ................................ TAGTAATTAAGGTACGCAATACGACGATCATCAG 165917 32 100.0 35 ................................ GCCCAATAGGTGCTGTCGGGGAGCGAGAGACAAAG 165850 32 100.0 34 ................................ GCGTCTCATCATAGGTGCGATCCCTTAGGATCGT 165784 32 100.0 34 ................................ CAGGGAGGCGACCCCTCATGGCTGGTGACCGGTC 165718 32 100.0 34 ................................ TTTTTACTTATTACTGTAATAATGAGGCTGCCAG 165652 32 100.0 34 ................................ CGCGCGGTACGGTGACCATTACGCCGGCAACCAG 165586 32 96.9 34 ............G................... CAAACGCCAGAGAAGAAACTCGATACAGCCGTCC 165520 32 100.0 34 ................................ ATGTAGATAATGGGCTTGGTGCCCCACCCGGCCT 165454 32 100.0 34 ................................ CGTCCTCATTGGCGGTCGAGAGGGTTACAGAAAC 165388 32 100.0 35 ................................ TCTGGGGTCACTGGGAGCCCATGGACGGGCTGCTC 165321 32 100.0 33 ................................ TTCTAGGACGGTCTGCCTTACCAGGTCGCGCAG 165256 32 100.0 34 ................................ TTGAGACTTTTGGCGGCACAAGCAAACTGGATAT 165190 32 100.0 36 ................................ CACCAGCGTTTATGATCACCGGTCCGTGCGTTCTGT 165122 32 100.0 34 ................................ CCGGTCGTGCGGGCTCGATTAGGTCCAAGCTTGC 165056 32 100.0 35 ................................ TCAAGGAACGACGGTTAAGGTCCATGCAAAGCCTG 164989 32 100.0 34 ................................ AACCAGCAAAACACCAACCTAGCCAACCGACAGG 164923 32 100.0 35 ................................ ATCGCCCGGAATGCCGCCAGGATCCCCATGAAGGT 164856 32 100.0 34 ................................ ACCGACACCTTGGCCCAGTGGCAGGCCAAAGGGG 164790 32 100.0 34 ................................ AGGTCGAATTCGACGTATTCGCGTGGATTATCAG 164724 32 100.0 33 ................................ CAGCGTTGGGTGACGCATGATGTGCTGCCTTCT 164659 32 100.0 34 ................................ TCGATGAATTCGATACGAACGGGGCATAGATGTC 164593 32 100.0 34 ................................ CACGTATTCACGTGGATTATCAGCCACCAGGGGC 164527 32 100.0 34 ................................ GCCGCCAAGCTTCTGCCGTCAGCCACATCACGCA 164461 32 100.0 34 ................................ CCGCCGGCATCGAACACCGTGATATGGGAGGCGG 164395 32 100.0 34 ................................ TGTCCATCGTTTTTAGCCGCATTAAAGATATACG 164329 32 100.0 33 ................................ AGTCTGCAAGCCCCATAGGGGGCCAAGAATGCC 164264 32 100.0 33 ................................ ATCACATGGCCGGACACAGCTGCGGCGACCCGC 164199 32 100.0 33 ................................ ATTACCATATCACCGGCATCTACAAGCTCGCAC 164134 32 96.9 34 ...........T.................... TTGCTCACGGTGGCCCTGACCGCGATCCCCGTGT 164068 32 100.0 33 ................................ GATACCGACCGAGGTGTTCTTCGCGAACGCCGA 164003 32 100.0 33 ................................ TGACAGTCTGCCGGGGCTATTGGCTGCTGCCCG 163938 32 100.0 34 ................................ TCCATCTCGATTTGAAATAAATTCGTCATCGCTA 163872 32 100.0 36 ................................ GTCAAAAATAATGAAACGAACGTCGGGAAATGCAAC GCGAGGT [163845] 163797 32 100.0 34 ................................ TTGTCCTGCATGAGGTTCAGGGCCTCGTTGTCGG 163731 32 100.0 34 ................................ TTGAGCCAGTGGTACTCCCAGTCAGGTCCGAGAG 163665 32 100.0 35 ................................ GACACGGACATCGCGCACACCGTCTCCCATGCCAT 163598 32 100.0 33 ................................ TTATGCTGTGTGCGAGGGTCGCACTACGCTGTT 163533 32 100.0 35 ................................ GGCTGTGAGCTCACCGTCCGGATCGTCGTTGGCGT 163466 32 100.0 34 ................................ AAAACTTTTCAGTGTGGATGACGGATACATTCGG 163400 32 100.0 33 ................................ AGAAACCTGGGGTCGCAGATTTGGGGCGCCATC 163335 32 100.0 35 ................................ CCAACCGTAGGGAATTTCAACAACGCCACGAACAC 163268 32 96.9 34 ...............................C GGCGAGGCCAACGCGTACACGGAGGCACTCAGGG 163202 32 100.0 33 ................................ CACCGGTAGACGTTGTCCGCGCCTACGGCGCGC 163137 32 96.9 34 ..T............................. TTAGCGTCCACATCCGTGACGTTGCCCGCATAGT 163071 32 100.0 35 ................................ ATTTTGGCATAGGCAAAGACCTCGTAGGAACATGG 163004 32 100.0 33 ................................ ATCAGGGACTGGTAGAGGTCGGCCTCGCTGGTG 162939 32 96.9 33 ...........................A.... TGCTGAGACCAACTCGCTGATTGATACGACCAC 162874 32 100.0 33 ................................ CGCAACGAGGCAGAAAAGACCGCGACCAGACGC 162809 32 100.0 35 ................................ GTAGTACGTTGCATGCGTTGTCTAAATGTCTGTAT 162742 32 100.0 35 ................................ AGTTAGAGGACACCATCTCTGATGATTGGTCCCAG 162675 32 100.0 33 ................................ CCGAACCGCGAGTGTGCCACCTTGGATGAAAAG 162610 32 100.0 35 ................................ AAGACACTCCCGCAATCGGCCATGGCGAACATTGG 162543 32 100.0 34 ................................ AGACGCGGGAAGCTACAACAGACAAGAGCGTAAG 162477 32 96.9 34 ..............................G. GCCCAGTCTTGGGTCCACTAAGGCAATGAGGATG 162411 32 75.0 0 .A.....T.C..GT...G.T........G... | G [162382] ========== ====== ====== ====== ================================ ==================================== ================== 96 32 99.5 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : TTACTATGGGGTTAGGCGCCATATCCCTGTTGACAAAGTGATGATGTTATAGAGCGTTAAGTGACTTTGATTTTACTGTTTTGTTTGGGTCGCAGAAATTAGACGATAGCTAAGTGGTTGGTGTAATTCTGTAAACAGTGCAGTATGTTGACTGCTGTTGTGGATCATCGTTGGTGCGAAACGCTAGCAATCATGTATTTGGCTGATCCTTCGCGTCGCAAATCTCTACTTCAGGACGATATACGGTCTTAATTTCGCATGTTTTCGTGAGCTGAGTTCTTTTCGCATTTCAAATCAGACGGGTATGTATACGAAAAAAGCTAGAATTTTAGTGAATCGGATGAACAGTTGTTTGATAACTGAATAGTGATGTTATCGACTTGAAGCATCATCTCAATTGCTCGACTAGAAATAGAATCTGGGTACCTAGTTTGGGCTGTTGGGAGTCGCCAGCCATTAAAAGCTGATCATATATTGGTCATCGGATGTATCATTGTGCT # Right flank : ACTGCAACGAATGGCTCTCTGCTTGCGGCAAATGCACTGCCTGCTGCGTGGAAACCTAAAACGAAAAACTGATTGCGCTGCTTTGAATTAACCATACAGCGCTGCTTCTTAGCTGGAATATGTATTAAATCAGTTCTTTCCTTAGAACTTTATTATAAATTCTGCTTCTTCAAAACATGAGCATGAGTTGCTGCTTCGGTATAGTACTAATCATTTTCATGCCATTCTCTCGTTCCTAGGCGCGAGTGTGCCGTCCGGTATAAGCTTGTAGGCGGTGTGTCCACGAGTAGCGGACTTGGAGGTGTGGTCGCCGATGGAGCAATTCGACGATGCGGATGGCGCGGGATCCGGCATAAGCGATGCAGCGAGTTCCACAACCGCGCAACTGCATCCGGATGAAGCGACTGCGGTGAACAAGGTTTCGGCCCACCCTGAAGCGACTATTCCGGATTCGGAATACTCGCTGGCTGAGATCGAGCAGCGACGTGCCCGCCCGGTCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //