Array 1 1604113-1603629 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041612.2 Streptomyces sp. S1A1-8 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================= ================== 1604112 28 78.6 33 C..AC......CTG.............. GGAGGGACGCGATGAGCGGGCCTGCCACGCGCC 1604051 28 96.4 33 .......................A.... GTCTTCTGCTACACCGTCGGTTTCGTCCTCCTC 1603990 28 100.0 34 ............................ AGGCGGCAGCAAAGCCGCGCGAGTTGAAGCTTCG 1603928 28 96.4 33 ........T................... GCCGGACCTGATCCTTCACGTCCTGCGCGATGC 1603867 28 100.0 33 ............................ GCCGCTTCCCAGCATTCGACTCAGCCCGATTCC 1603806 28 100.0 33 ............................ GGCCATCACGTCGATGTCGGCGACGGCGGCGTT 1603745 28 96.4 61 .................T.......... GCCCGGAGAGCTCCTCGCTCCGAAGGGCTGACGCGCGGACGCCCAGGCCCGCTACGTTGTC 1603656 27 71.4 0 .C....A....A..C..TT...-....G | C [1603639] ========== ====== ====== ====== ============================ ============================================================= ================== 8 28 92.4 37 GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Left flank : GGAGTCCGGGGATCTCCTCGCCCGGGCCGTAGAAGTGCCGGAACCGCTGCCAGGGGACCTCGTCGTACCTGAACCCGTCCTTGACCTCCCGCGAGATCGCGCCCACGGCCGTCCGTACGTCGCAGTCCGTGCCGACCCACCGTTCCGGCCAGCCAGCCCAACGGTCATCGTCCATGGCTTGGCCTTCCAGTTCACCGACAGCATCCGAACCCCGGGAGTTTAACGACCGGTGATCAAGAGGCGGACCGCTTCTGCCGCACTCCGGTGGCACCGCACCACAGCGACGTCATTTCTCGTTCTCGTGAGCATCTGCAGCACTCAAGATCGCCATCTGCTGTCCAAACGCTGCTACTTCACGTGAACGAAGCCACCGGCCGGCTCACCCCCGCCTGCGCAGGGAGGACCGAAGAACGAAACGGCAAGAATTCCGGGACGACGGCTCACCCCCGCCTGCGCGGGGAGGACAGGGTCTTGGGAGGATCACTCTTTGTACCCGGCGG # Right flank : CAATGAAGGCCATCTGGGCACTCCTCACCCTGCTATTCGGCGTACTCACGCTCGGAGCCATTGCCAACGCCATCCAGTCGCTGACGGGCGCTGGAGCATCCGGCGCCCACAACAGCTACAGCATCAGCACCGGCATCATCGACGGCGCCCTGCAGCTCATCTTTATCGCGCTTCTCGCGCTTGCCACCAGAGCCTGCTATCGGCGAGCCTCACGCGGCAACCAGCCCCGCCCCGGCGCCGACAGGCGACCCTGGGAACGCTGACAACACAGCGCCCGCCCCAAGTTGGCTCGGGCGCTACGCGAGTTCCGGACCATCTCCCCAACGGTCCATGGTCACAACTGTGTCACCGCCCTCACCCCCCACTCACACTTTCTTCACACCACCCGTTACGGTCACTCCACCACGAACCATCCCTGGGGGGACCATGTCGTACAACCAGCCGCCGCCACCGCCCGGATACGGGCCGCCGGCCGCCCCTGCACAGCAGCCGCCCAGGCC # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCGCCCCGCGCAAGCGGGGGTGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 11417018-11416629 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041612.2 Streptomyces sp. S1A1-8 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================= ================== 11417017 29 82.8 32 ..T.A......TGG............... CTGTCGATCGAGGCCCAGGCCCAGGGCACGTC C [11417011] 11416955 29 96.6 32 .......A..................... GGCTTCAACTTTCCCTGCTGGAGGATCTCGGG 11416894 29 100.0 32 ............................. AACACCCGGGGCCGTGACCCCGTAGACAGGTG 11416833 29 93.1 33 .............G.........A..... GCAAGGAGTCGGTCACCGTCACCCTGTCGCAAT 11416771 27 82.8 87 ..T........A......-..C...-... TCCTTGATATCGAGCGTGAGTTCCCCGTCTGTGTTCTCCTTCCTCAGCGGCGGAGGTGCCATTGGCGAGCATCTGCCCGTCGACGTC 11416657 29 79.3 0 ...........CG........T....AGT | ========== ====== ====== ====== ============================= ======================================================================================= ================== 6 29 89.1 43 GTGCTCTCCGCGCCAGCGGAGGTGGGTCG # Left flank : TCGACGCCGAGGGCATCGATATGGGCCCGTCCCCGGTGGACGCCGCGCTCGCCGCCGACCTGGTCCTGCCGATCGAGGAGCTCGAGCTCACCGTTCGTTCGTACAACTGCCTCAAGCGTGAGGGCGTCCACTCCGTGGGTGAGCTCGTCGCCCGCTCCGAGGCCGACCTCCTGGACATCCGCAACTTCGGTGCGAAGTCCATCGACGAGGTCAAGGCGAAGCTGGCCGGCATGGGCCTGGGCCTCAAGGACAGCCCGCCCGGATTCGACCCGACCGCCGCCGCACTCGGTGCGGACGACGGCGCGGACGCGGGTTTCGTGGAGACCGAGCAATACTGAACGCTGCGCTGCGCCGGTCGTAGAGACGCTTCGCGCACCGGCTCACCTCCGCTCGCGCGGAGAGCACGCGTACCTGGACCGCGTCTTCTGGGACCCGGTCGGTTCGCCTCCGCTCACGCGGAGAGCACCGCTGGTTCTTCACCGGCGCCCGCTCGGTCGGCG # Right flank : CCGCTGCTCTGCTCAACGACGAGATTCGTCTCCCTCGCCGCACGCACCGAGCCGTGCCATCAAGCGACCGGGTGCGTCGGCAAGCATGTTGTTGAGCTGCTGGACGCCCGGGAGCTGGTCTGGATCTCGTGTCCGCGGCCAAGATCCGGGCCATTCCCGGAGCAAGTCGCCAACCGCTGCCGACAACGCTCCCGTCTCCGCAGGTCAGAGCAGGCGCCTCGCGTGTATCACCATGAGACGCGGTGGCCTCCGGGATGCACGGGGCAGGCACAGGGCGCAGAGACATCACCGCCCTCCTTGTCTCCCAGCGAGACGGAACCCAACCGGCACCAGACTGCCCGACCAAACAAGATCACCAAAGGCAGTCGCCGAATCCGCCAAGACCGCGTCGGAGTGGACCACGGCGGCACCATCCATGTGGACAAATACGATCAGGCCCTGAAAGCCGCGCATCAGGCCGGCTTCCCCCTGTTCTGCAAACCGGCCTCACTGCCTGGACC # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.45, 5:-1.5, 6:0.25, 7:-0.97, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCCAGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //