Array 1 156119-157796 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVMT01000001.1 Emticicia sp. C21 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 156119 30 100.0 35 .............................. TTTCCATGCGTTTTTTACAATAGCAGAAAAATTAA 156184 30 100.0 36 .............................. AAGCTGACAACCTTTTGTGTAACACTATGCGTTTGG 156250 30 100.0 36 .............................. CAGGTTCAACCACGGGCTCAACCACAAGTTCAACAG 156316 30 100.0 36 .............................. GGTTAAGCCCCCTTTGCGTATCGCTCCTGTCAGCAC 156382 30 100.0 36 .............................. TAGCAGAAGCATTAGGAATAACAGTAAAGGAGTTAA 156448 30 100.0 35 .............................. TTCTCGGCCACTGCTTCTGCTACATTCATTATAAA 156513 30 100.0 37 .............................. TCATAAATTTCTTTTCCATGTTTATCTAAAAGTCCAG 156580 30 100.0 36 .............................. CCTGGAAATCAAACATCTTTTTCATCAACACATCAC 156646 30 100.0 36 .............................. TGCCGTTAAATTGTAAAGATGGCTAAACGGTACAGC 156712 30 100.0 35 .............................. AAAAGCAAAAGGAAAAAAGAGTAGTAAACGGTCGA 156777 30 100.0 36 .............................. CCTGTACCCGTACCACCTGATTGAGCATTGTAGGCA 156843 30 100.0 36 .............................. GCACAAACCAATACCAAAGGCTTTAAAAAAGGCGAC 156909 30 100.0 36 .............................. TAGAATGACCGGAGTACCTGGCTTTACATTTCTTGC 156975 30 100.0 36 .............................. ATTATTAAAAACTACTCCTTCAAGGCTTCCAATTTC 157041 30 100.0 37 .............................. ATACAGGACGCAACCCCACAATAAAAAAAACACCCCC 157108 30 100.0 36 .............................. TCAGAGCCGATACTAAAAGGCAGATATTGGAGGTAA 157174 30 100.0 36 .............................. TTTGCAGTATTAGCGTATAGGTATTATAGAAAGCAT 157240 30 100.0 36 .............................. ACGGAGAATAATGGTAAAGGCTATAGTTATCAGATG 157306 30 100.0 36 .............................. ATAAAGATTTTATTGCCTCATCTATTTTGTTTAGAA 157372 30 100.0 36 .............................. CTAGAACTGGGCAATTACAAATAGCTCTAGCTAATA 157438 30 100.0 35 .............................. TTTTATAACAAAATACATTTCATTTAATACAGCTG 157503 30 96.7 36 ......................G....... TAATTGCTACCAGTTGAATCTATTACAAGGGTTTGA 157569 30 100.0 36 .............................. ACTGAAAAACCCATTTGTGATGCTACTGAACCTGAA 157635 30 100.0 36 .............................. ATGGTTTCGGTATTAATACACCAGAATTAGATGAAA 157701 30 100.0 36 .............................. TCTACTCAGGATCCTTTTCCTCTGTTAGCGTTTCCG 157767 30 96.7 0 ........................A..... | ========== ====== ====== ====== ============================== ===================================== ================== 26 30 99.7 36 CTTTTAATCGCACCATTGAGGAATTGAAAT # Left flank : TGTAAGTTTTGTACTTGCCTACAAGCAAAAACCTGGGCATGAGGTAATACAGGTTAAAATAAGCGGCTAAGGCCTGAAAAATGATATAACCATAGAATTTAACAGGAAAGGCCCCTAGAAAAAGATAAGCATAGGCATCGCTCAGATTACCGATGTTAATCCACATCCATAATAAATGATAGCCTATCCAGAAAACAATATGGTGAAGTTTATATCGAAAAAACCAGTTTTGCATCAAATAAAGAAATAGCGACCAGGTTATCTAATACCGAAATATACCGCTAATCTCAATGGTTATCAAACCCTGCTTGACGTAAGGTAAGAAATAATTGATGAAATGCAGGGGAAAGTCTCTATATTTACATTGATTATTGAATCTATATATAAAATTGTCGTCGATGTCCCGGCAAAATCTTGCTTTTATACATCGACGATTTTTTTATTTGTATTTTCCCATAAAAAGCCTTAATATAGCCACTGCAAAGCATATTTTTAAACGG # Right flank : TATTGGCAACTAAACACTACGCCAATGCCTCTAATCTCTCAAAAACAGGAATCATGATTTTGCCTTTTTCAGTCAGATAGTATTCAGTATACAGGGATTTTAGTTTAATCGTTATTTTCCAGCAGAACAGCCTTTGCCCAGGTTATACCCCTTATGACTTTCTCCACATGGTCTAACTGTCTGATTTTACCAAAGTCTTCTCCAAAAACTTTGAAAACACAAACCTAAGTAGGAAATTTAAGGAACGCCTGTTTTTTGGATAAACATTCACAATTAGGCGTGCGTAACTAGTTGTCCACACAAATTAATATCATGGAAAAAGAGAAAAACAAAATCAATCTAGGGGGTAGAGGCATCACTGACTACCTACCTGACTTTGAAGAGCAAGCCTACAATTATTGCCTTTTGGGGGCAACCAACGAGTCACTCGCCGAGTTTTTCGGGGTGTCTACTACTACCCTGAAAAAATGGATGAAGAAGTATCCGGGTTTTAAGGAATC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGCACCATTGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 601578-594707 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVMT01000002.1 Emticicia sp. C21 contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================================================================================== ================== 601577 29 100.0 36 ............................. TCAATAATTGTAACTATTTCACCATCTTGAAATTTG 601512 29 100.0 36 ............................. ATGAATCCATACGTTGAATGCCTGGTTTTTCTTCAG 601447 29 100.0 37 ............................. TTATTTATAAATACCAGTCTTATCCCGGCATTGTCTG 601381 29 100.0 36 ............................. ATTATGGTTGGTGGTTACAAATTGGCAAGCTACATG 601316 29 100.0 35 ............................. GTTTCAGGCCGCCACAGCAATAGTGCCACGTCTGC 601252 29 100.0 37 ............................. ACAATAACACTGGCTACATTCCTGCTATTATCACCCG 601186 29 100.0 38 ............................. AAATTTAAAAAAAGGTGTTGCGTATGGTTTAAATCCTG 601119 29 100.0 36 ............................. CTTTTCTTTGATTCTTCCATCCTTTCTTCATTGATA 601054 29 100.0 36 ............................. CAAGGTAGTGGCATGTTTCAATTGCACATTTTGCCT 600989 29 100.0 36 ............................. AGAAATAGAAATATTGCTATCTCCAACAGCCGAACA 600924 29 100.0 36 ............................. CCAACAAATTCAAGTGTGCCATTAGATCTTAATTTG 600859 29 100.0 36 ............................. TCAAAGAAATCTTTCTTTCAATAGCGGCATTGGCTT 600794 29 100.0 36 ............................. GGGTAAAAATTTTCCACCTGAAGTAAAAGCGTTTAA 600729 29 100.0 36 ............................. TTTTTGTACAAGGTTTGAGAAATGAAAATTAATTTA 600664 29 100.0 36 ............................. TTTTTGTACAAGGTTTGAGAAATGAAAATTAATTTA 600599 29 100.0 37 ............................. ACCCATTCGGACTTGCAGCCGCTGCACTGGCTTCATT 600533 29 100.0 36 ............................. AGTTTAAAAGCTTTCTGCTGAACAGCCCCAACACTT 600468 29 100.0 36 ............................. TCCTTAGTCACATGCTCATTAGCTGCATCATCGAAG 600403 29 100.0 36 ............................. TTCCCCCACACTTCCGGCACTTCCAGAACGTAGCCC 600338 29 100.0 36 ............................. AATTTTCCTGACTTTCATTTGCATCAAGCTTCACAC 600273 29 100.0 36 ............................. TTATCTCAACAACTACCAAACAGTTCGAATCTGGCC 600208 29 100.0 36 ............................. ACAAAAACAACAGCAATAAACATTAGGTAGAGTAGT 600143 29 100.0 36 ............................. TTATTTCGCCTCACCTTTCCCTGCCGCAATCGGTTC 600078 29 100.0 37 ............................. AACTCCGCCGACGGCTCACGCTCTTCCCTATACTCAC 600012 29 100.0 36 ............................. ATTACGGTCAATTCTAATGCAATCAGAATCACTTGG 599947 29 100.0 36 ............................. TACGCATTGCAAAATCTAATTGGACTTCCTGGCCCA 599882 29 100.0 37 ............................. TCAGTTTCGCGGTTAGCTGTCTGATAGGCAAATACAA 599816 29 100.0 36 ............................. ATGGATTTAAGCCAGCATTTAAAGTACATGAGAAGA 599751 29 100.0 37 ............................. TTGCTGTGTGTCGGGTGATTTCTCATATTGTGAAATA 599685 29 100.0 36 ............................. ATTATAACAATTTACGGGGTGCCGCTACTGATGCCA 599620 29 100.0 36 ............................. ATTTCAGTTAATAGTCTTTTATCAGCTATATCAATA 599555 29 100.0 35 ............................. TTTTATTGCTTCATTCGTGCTGCATTCGCATCCTT 599491 29 100.0 36 ............................. TTGGAAGCACGTATAAAAGATGTGCCAGGATACACA 599426 29 100.0 37 ............................. CGAACAAATCGAAAATTATCAAAGTTCATGGTTTCTG 599360 29 100.0 37 ............................. TTTTACGAGTGCTGAAAGCATTGCAAAAAAGGTCGCC 599294 29 100.0 36 ............................. ATTTGTACGGAGATATGCGAACCGAATCCGCAAAGA 599229 29 100.0 36 ............................. TTTAGTCAGGCGGTTCAGGCATCACTAACCAAAGCG 599164 29 100.0 35 ............................. AATGATGACATTAATAATTGCACCGCTCCAGATGG 599100 29 100.0 36 ............................. GCGACGTAGCGAAATTTATGGAAGGACTGGTAACAG 599035 29 100.0 36 ............................. AGTCTACTTGCGATTTGCTTGACTTTTTGCTCAAAA 598970 29 100.0 37 ............................. ATGCGAGTATTAAAAGCACCAAAAAAGCCAAAATTAA 598904 29 100.0 36 ............................. AATAAACCGTTTTTGCTTTCGGTAGAAGATAAAAGC 598839 29 100.0 36 ............................. TTGCAAAAAAGTTAAAGTACTCTTAAAAACTCATTC 598774 29 100.0 36 ............................. CTTTTCTCGCAACATACTGTGCGATGGTATCGGCTA 598709 29 100.0 35 ............................. TTGTTTCGGAATTAAGTTTCCAACTGCATTCCTAA 598645 29 100.0 36 ............................. TTCACCTTTATGCTTTTTAATTGGCTCATAGCCTTT 598580 29 100.0 100 ............................. TCTGGACGGGGGCGAAATCGAATTGTAGGGTACATGCCAGGTTTGTACTGTGTTTGCAGATACCAAAAGTAAAGGGCGAAATCGAATTGTAGGGTACATG 598451 29 100.0 35 ............................. AAAATCTATTGTTTTCGGTCGGTGGTATCCGCAAT 598387 29 100.0 36 ............................. TTTTCAAAGGTCAAGCAAGTACACAGTATTTTACTA 598322 29 100.0 36 ............................. ATAGTAAAAACCTATGGTGCACGTGGCTTAAATTCT 598257 29 100.0 36 ............................. ATTGCTCCACCCCGCGGGTGCTGTCCCTGACTCAGG 598192 29 100.0 35 ............................. AACCAGTTCCGTACAACCTGCCTTATCTCCCACAA 598128 29 100.0 36 ............................. TTGTTATACTAAGTTGGTTATACGTTGATTAACCGA 598063 29 100.0 36 ............................. GAAATAAGAGGGGCTTATCACTTAGTAACAGCTGGA 597998 29 100.0 37 ............................. GGCGTTTGAGAACAGGCAATTAACACGCCGAATAAAT 597932 29 100.0 37 ............................. TCGGTAGGTGACCCTTTTCTATCAATCGCACTTCACT 597866 29 100.0 36 ............................. CATATTTAGCGGCTCGTTTGTCGGTAAGTTTGGCCC 597801 29 100.0 36 ............................. CCGCTCGTATCGTGTAAGAAGTTCCCGCAACCCTGG 597736 29 100.0 37 ............................. AATAGGAGGCTATCGTAGCGGCTCTCATGGGTACGGT 597670 29 100.0 35 ............................. AAAACTTAGCTAAATGCTTCATAGCTAAATTCCTT 597606 29 100.0 37 ............................. GCGGTATACATGGGCGGCCGTTCAATTCATGATGCAT 597540 29 100.0 36 ............................. TTGAATACCGGACTTGTGCCCAATGTGATAGTAACG 597475 29 100.0 36 ............................. GCGCAAACGCCACCCGTTTCCCCGTATCATCAATAT 597410 29 100.0 36 ............................. CAATTAGGCTGCTTCATAATCGGGATAATATTGATA 597345 29 100.0 37 ............................. TTAGAAATTACCATTAATTATTACCATTACAAATTAA 597279 29 100.0 37 ............................. GGATTACTCTTATAGTATTCCTTAACTACCTCCTGCT 597213 29 100.0 36 ............................. GGTATTTTTAGCTGAACATTCTGGCCTACCTGATAA 597148 29 100.0 36 ............................. TGCACTACGGCCCCCCAGAGCATTGCCGAACCGGTT 597083 29 100.0 36 ............................. TTTGAACTCCCAGAGCCTTGGCTTCATCGCTTCTGG 597018 29 100.0 36 ............................. CAAGATACCTTAAGTGCTTATACTTTATTTCATTGA 596953 29 100.0 36 ............................. TTAGTTGCCAATCCATTTTCTTGAACCCGATCCCTT 596888 29 100.0 35 ............................. TAAAGCGGCGGCTGCCAATCCTGCGGGCGAAGCAA 596824 29 100.0 35 ............................. TACATAAACTCGTCATAAGGCATCAAAGGATTTGG 596760 29 100.0 36 ............................. ACGGCGTTCTAATTCTTTGATAAAATCAATGTCATT 596695 29 100.0 37 ............................. TTGGGTGTTTCTTTATTCGCACAATCGGTATTTTAAG 596629 29 100.0 37 ............................. ACATTGCATTCGGGTTCAACTGGTAGTGGTGTTTTTC 596563 29 100.0 36 ............................. ATGAAAATACGCCGTCTTGTTGGGTTGAGCCAAAAA 596498 29 100.0 36 ............................. TAAACTTTGCTACGTCGCTGGTAGCTGAAATACGAA 596433 29 100.0 36 ............................. CTTTTATAAGTAGTCTTAATGAGGATATTCCAGTTG 596368 29 100.0 37 ............................. AAAGTCTGTTGTGCCTAATTCTGCACCGCTATTTTTG 596302 29 100.0 37 ............................. CCTGTTAAAACCTTTGGTGCAAGGGGTATCGCTCCGA 596236 29 100.0 37 ............................. AAAATCAACTTGGACACGCTACGAAAAAAAGCTGAAA 596170 29 100.0 37 ............................. GCCGTAACTTTGGCACTACACGTGATTTTGATTAATC 596104 29 100.0 36 ............................. GATGAGAATATTTTTAATAATAGCCGTATTGTCGGC 596039 29 100.0 36 ............................. CCATTACCAGCCATTTCAACAGGCACAGGCGGTGTG 595974 29 100.0 36 ............................. TTTGCGGCTAAGAGTTGCGCCAGTGCGTTCTGGTCG 595909 29 100.0 36 ............................. AAGCTAAGTGCTTCAAAGCAGACTTGGAAAAACTAC 595844 29 96.6 36 T............................ TCTAAATGTATCTCGTGATAATGTTTTAGATTATTA 595779 29 100.0 36 ............................. TTTGGTGGGAAATTTAAAATGCCACGTACTGAGGCA 595714 29 100.0 37 ............................. ATAAATTGCCCGCGCCATACTGAGAATTTTCTAACGA 595648 29 100.0 36 ............................. TCAGGAACAGGGCTTTTTTTTAAGGTACTCAAACTA 595583 29 100.0 36 ............................. TTTTGTGTTTTTATCTCGTACTTCATATAGACAAAA 595518 29 100.0 37 ............................. GCATTTACCTTCAGGCGCTCTATATCTACAAAATAAG 595452 29 100.0 36 ............................. GAGGTTAAAGAAGAGGTTCAACCTAATGAAAAAGTG 595387 29 100.0 36 ............................. GATTACACCACCAGTCAAAAGCGCAATAGCAGCTAT 595322 29 100.0 36 ............................. CTGATAAAATCAGTACTACCTTAAATAGTATGCTCA 595257 29 100.0 37 ............................. AACCTACAGAAGATTTTGTTAGGCCGCTAATATCAGT 595191 29 100.0 36 ............................. GGCCTGAATAGGATTATATGTCCAGGCATTAGTAGC 595126 29 100.0 37 ............................. AAGAAGGCAAAGATGATGTCTAACATAATTAATGCAG 595060 29 100.0 37 ............................. GTTAGTTATTCTACTTCCTGTTACACCAAAAGCGGCA 594994 29 100.0 35 ............................. AGTGGTATTTATATGGTATTATACCGTAGTGAATA 594930 29 100.0 35 ............................. TCCTTTAATTTAAAATCAGTTTTAAGCTTCTTATC 594866 29 100.0 36 ............................. TTGGTAGTAAGGATTGATAAAAACTTATCTCCATAC 594801 29 100.0 37 ............................. TGTTTTAGGGGCTATTTGCTTTATCAGGCTTTACCAG 594735 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ==================================================================================================== ================== 105 29 99.9 37 CCTCTAATCGTACCTTATGGAATTGAAAC # Left flank : ATAATTTTAGTTTTGTTGACAAATTTTAAAGTAAATGTATGTAATTTTGGTTTATGACATCGGCGAAAAGCGTGTCGGCAAGATGCTCAAGCATTGCCGCAAATATCTGAACTGGATACAGAATTCGGTATTTGAGGGAGAAATCACAGAGGTAAAATTAAAAGAATTGCTGGCAGGCGCCAGAAAAATAATGGATGAAGCGCGGGATAGTGTGATTATTTTTAAAAGTAGAGATGCGAAGTGGCTGGTTAGAGAAATTGTGGGTGTAGAACGCATGACGACAGATAATTTTTTATGAGGGGATGTCGTCGGTAGGAAGAAAACGAATCAGATTTTGTTCTTTGACATTTTGAAAAACAAAATAAAAACAGCTAAGTCACTGATAATCAATAGTCGTCGGACTCCCGGTAAAATCCTATTACCGGAGTCCGACGATTTTTGTCTTTGTTTTTATGTCAAAAATCGCTTTATTTACCTCTGCAAGGCCGTTTTTCAATCGG # Right flank : CTTTCAGAATCCTTGTAAAACTTCTAGATATTAATCTTTTAATCGTGTTTCAAAATATCTTAAGCAACATTATTAGGCTTAATTGAGTTACTTAGAAACCAGATTTTGGAAATAAACTTTATTTAGAAACATGAAAATTAGACTATCTCACCTAATCATGACATTTTGTTGCCTTTCGTTTATTGGCAAGCAGAATGTAAATACCTCTTCATTAGTAAAGTATAATGGTTTTAAGCCTACAGAAGAAAGGATATTTAATCCGGAAAGAGGTTTTTACCAGCATTTCGATACAAACTCAAAGTACTACTCAAGGCTTAAAGAGAATATATTAGATACATTAAAACGAGCTAATATCTCCATAATCTATCGAGGATTCTATCTTGACGATTTTATAAATGCCCCAATTTCAAAAGCTTATCTGGACAACGTGCAGGCTGATTTTGATATGCTCCGAAAGGTTGGTCTTAAAGCTGTCATTAGATTCTCATACACAAAGAACT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCTAATCGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA //