Array 1 323543-319731 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGDL010000001.1 Pseudoalteromonas sp. K222D K222D_scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 323542 29 100.0 32 ............................. ATACAGGCATGACTCAGTACGAATGGCTTAAA 323481 29 100.0 32 ............................. TTTGCATGACCCAAACTACCTGTAAAACGGTA 323420 29 100.0 33 ............................. CATCTGACCTCTGTCGGTGCGCATTGGCTCGAC 323358 29 100.0 32 ............................. TTATGGGGTGTAAAATGAAAGACAGAAAATAC 323297 29 100.0 32 ............................. GCTGATTATTACCCTTATTGCCTTGACTGTCA 323236 29 100.0 32 ............................. TATTATAAAGCTGCTGAGCAATAACCCCATGT 323175 29 96.6 32 ............................A TTAGCGCAGCTAGTAATGGGCGCAGGGCAAAC 323114 29 100.0 32 ............................. GAAGAAGTGAACCGTATACTTCAATGCAATGT 323053 29 100.0 32 ............................. TTGAGATGCGTGTCCTGACTAACTACTATAGA 322992 29 100.0 32 ............................. TTAGATTTACTTATTGGGCCGCAATATTATTT 322931 29 100.0 32 ............................. ATAGCATTAACATTTCAGTGCCACATTATGAC 322870 29 100.0 32 ............................. GTAAGAGCGAATGTTTGAACGTTTGAAAAGTC 322809 29 100.0 32 ............................. TTCTTTACCTGAACCTTCCACCAGCCCAATTT 322748 29 100.0 32 ............................. TGCTACCTCCATGTCGCTTACGAGTCTATTTG 322687 29 100.0 32 ............................. GGATCACATGTTATGAAAAATATGTTCGATAA 322626 29 100.0 32 ............................. CCCCTCAACCGAGCCAGAATACTTATTAATAA 322565 29 100.0 32 ............................. CATGTGGTACTTGCATAAACGGAAACCTACCA 322504 29 100.0 32 ............................. TGATTATTTGTTTAATTAAACTGTCTTCACTA 322443 29 100.0 32 ............................. CATCAACCGCCGCCCTGCACGCATTAATGATG 322382 29 100.0 32 ............................. TGTGGGAATTAATAGCCCGCCGGTACGAGTTA 322321 29 100.0 32 ............................. TCAATTATTACTGCATCGTATTGCGGGGCAGC 322260 29 100.0 32 ............................. TCAAACCCAATCGGCCCAGCCGGTTACAGTGA 322199 29 100.0 32 ............................. CCGCTGTTAATGCCTTTTTTACGTAGGTATTT 322138 29 100.0 32 ............................. CGCGTTGCAGTAATTTATTAAATGAGGAATAT 322077 29 100.0 32 ............................. CCGTGGAGGCAGCGAGTGGTGGTAAAAACACG 322016 29 100.0 32 ............................. ATGGAATTGCCCGTCGGGTGCAGTGGAGTTAA 321955 29 100.0 32 ............................. ATCTGGCGCATTTGTTTGATGCTGGCTGTTTT 321894 29 100.0 32 ............................. AGTGGCCATGTGCCAAACTTGTGCCATTTATC 321833 29 100.0 32 ............................. CTTGGTGTTTACGGCTCACCTTTTGATGCTGA 321772 29 100.0 32 ............................. GCGAGGTTCCCATGCTCTCATTTAACAAGGCG 321711 29 100.0 32 ............................. GATAGCTAAAAATGCTTAACCAACCTCAACAG 321650 29 100.0 32 ............................. ATGGCAATAAACTTAATTTTTCCCCTGATAAC 321589 29 100.0 32 ............................. AGTGGTGAATAAACGTTTTGTCGAATAGTGGT 321528 29 100.0 32 ............................. GAGACACTTACGTCGCCTTCGCTCGCTTGTGT 321467 29 100.0 32 ............................. ACGGTATTAGCAATAGCCGCAGCATGCATACT 321406 29 100.0 32 ............................. CATTTACGTATGAGTCCCAAGCCATCAATAGT 321345 29 100.0 32 ............................. AGTGTATAGGTTGTGCGAAGTTTACTTTGTTG 321284 29 100.0 32 ............................. CTGTTTACGATGAATATCATCATTGGGCGAAT 321223 29 100.0 32 ............................. CGAATATGAAACGTTAGAGCCTAAAGTTGAGT 321162 29 100.0 32 ............................. CATTTACGTATGAGTCCCAAGCCATCAATAGT 321101 29 100.0 32 ............................. AGTGTATAGGTTGTGCGAAGTTTACTTTGTTG 321040 29 100.0 32 ............................. CTGTTTACGATGAATATCATCATTGGGCGAAT 320979 29 100.0 32 ............................. CGAATATGAAACGTTAGAGCCTAAAGTTGAGT 320918 29 100.0 32 ............................. GTTTGACCGACTCGATGAAAGTTGACCTATCA 320857 29 100.0 32 ............................. CGGCCAAGTAACACTTATTAGCAATAAGTGGG 320796 29 100.0 32 ............................. CGAGGTTATAGTGCCCGAATAGCCGCTAGCGC 320735 29 100.0 32 ............................. CCCCGATGCGCAAACGCTAATCGACGACATGA 320674 29 100.0 32 ............................. CCCTATAATTTGGTTGATACTAGTGCTGACGA 320613 29 100.0 32 ............................. TTAATTCATCACCTTTCTTAATAAAGTGACTA 320552 29 100.0 32 ............................. CCGAGCTACAGCAAGGTTACTTTGGTATTAAC 320491 29 100.0 32 ............................. ATATATGGGGTGTTGGTGAAAGAACAAAAGCA 320430 29 100.0 32 ............................. CCCGATGCAGAGCCAGCATTTAGCACGTACAG 320369 29 100.0 32 ............................. GTTTTACCTGAGCCTGGCAGGGCACACACGTA 320308 29 100.0 32 ............................. CTAATTATGGGGTTAGCTTTGTACATTCAACA 320247 29 100.0 32 ............................. CTTTGCTTATTGTTACTGGCACGTTTAGCCAG 320186 29 100.0 32 ............................. TCCTGTATTGACATTTCAATCAATTCATCTGA 320125 29 100.0 32 ............................. GAGACACTTACGTCGCCTTCGCTCGCTTGTGT 320064 29 100.0 32 ............................. CGTTAACAATGGCAGTATGGCTGGCGTACTCT 320003 29 100.0 32 ............................. CGGCCGATCCGTTTGCTGCTAAAGTAGCGTTA 319942 29 100.0 32 ............................. CCAATGCGGTTAGTGTGATCAATACCGCCTTG 319881 29 100.0 32 ............................. CTTGGGTTGCGGCTAATTTCTTTCATTTATTT 319820 29 100.0 32 ............................. CCAGATGATAATGGTGTGGTCATAGTTGAATG 319759 29 96.6 0 ..............G.............. | ========== ====== ====== ====== ============================= ================================= ================== 63 29 99.9 32 GTGTTCCCCGTACCCACGGGGCTGAACCG # Left flank : ACTAAATGCAGGAGAGATCACTCCACCTAAGCCTTATGATGATGCGCAGCCGCCGGCATTACCAGAGCCAGAATCTATTGGTGATTCAGGTCACCGTTCAAGTTAGGAATAGATTATGAGCATGTGTGTTGTAGTAACCGAAGCCGTACCGCCAAGATTAAGAGGGCGGTTAGCTGTTTGGCTATTAGAAATTCGAGCTGGTGTTTATGTCGGCGATGTTGGCAGAAAAATACGAGAGATGATTTGGCATCAAGTCCAAGAGTTAGCAGAGCAAGGAAATGTTGTAATGGCGTGGAGTACAAATACGGAATCGGGTTTTGACTTTATTACTTATGGTAAAAATGCACGAATGCCAATTGATTTAGAAGGTTTAAGATTAGTTAAGTTCACTCCAATTACGCAAGAAATACCGACTGATAAATAACTGTTTTGCTCTTTAAAAATCTGGTAGATTTTACTTAGCTATTTTTATTTAATTAAAACAAGCATATACTCTTAGA # Right flank : CCTGTATTCCGATAAAGTATCAATTTAAAAACTCAGCAGTTAGTTATAAGCCGAAAAGTTTTTTCTGGCAATTAAAAAGCCAGCGGGTTAATCCAACTGGCTTTAAAGTCTTATTATTTAACCGTAGTTAATACTATTAACGGCGTACGTCTTTTGGTGCGCCACCTTCAGGCCAATCGTTTGCTTTAGCGGCAAATGCTGGGCGTGCTAGGTGGCTAAAGTAAAAGGCTATATCAACGGCTTCCTGGTCAGTTAAAATACCTTCTTGGCCAAGTGGCATGTTGCCTTTTATAAATGCAGCGGCTGTATAAGTACGTGCCATACCTGCGCCGTCGTTAAATGAGTTGTCGCCTGCTACTGCTGGGAACATATAAGTGCCACTAGGGTATAAACCTTTGGCGTCCATTTGATGGCAGCTTGCACAGTGCAGTGCATACAGTGTTTTACCATTTTCTGCGTTTGGCTCTAGGTCTTTGTTAATTGCTACAAAACCATTATTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACCCACGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //