Array 1 41510-43443 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBEV01000003.1 Ligilactobacillus salivarius strain AH43348 AH43348_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================ ================== 41510 36 100.0 30 .................................... TATTTGTGGAGGTTATGATATTTGGATCAT 41576 36 100.0 30 .................................... TATCTATCGTATTTATCCGCCTTAGGTTTA 41642 36 100.0 30 .................................... CTGCGATACTGTATATACCTTGAGCAACTT 41708 36 100.0 30 .................................... AGAAAGCCAAATGAATAGTGGTTGGAATAA 41774 36 100.0 30 .................................... TCTGATAGCCAGAGAAATGAATATTGTAAA 41840 36 100.0 30 .................................... ACGTTTGACTAACGTAAGCAAAGTTAAAGC 41906 36 100.0 30 .................................... AGTAATGAATAGTTAAGTATAAGCGTTTAT 41972 36 100.0 30 .................................... TAAGCCCGTTAATAGTGGTGATACACAGCA 42038 36 100.0 30 .................................... TTATCTCTATGAAGAAATTCAAGCTATTTA 42104 36 100.0 30 .................................... TGGGTCAATTAACTACAATGTTATGACTAA 42170 36 100.0 30 .................................... TTCACAAAAAGCTATCAAAGAGACTACTGA 42236 36 100.0 30 .................................... TAACCGCTAATGTTAGATATGACGAAAGAT 42302 36 100.0 30 .................................... TTAAAGCAGTTGGCAAGGTTGGAGATGCAA 42368 36 100.0 30 .................................... GAAGTTTTACATTATGAAGCCCAAGCAAGG 42434 36 100.0 30 .................................... AGCGTATGTTGACGCTTATGATGGTTGGTT 42500 36 100.0 30 .................................... AAAATTATATTATAAGGAGTGCGGTTTTGT 42566 36 100.0 30 .................................... AAGGCGGTGAGATTAGTTGCAATGGCTAAA 42632 36 100.0 30 .................................... ACGGTATTAGTGGATCTAGTTCCGCTGGTA 42698 36 100.0 30 .................................... AAAGGGCTTGAGAAACAAGTTTGGTCAGAT 42764 36 100.0 30 .................................... ACAGCAATTTATAAGTTATCTCGCGATTGG 42830 36 100.0 30 .................................... CAATTCACACCGCAGTTCAATCAGCTTACG 42896 36 100.0 30 .................................... TGCTTTACCTTTTAATGTGTCTTTAAGCGA 42962 36 100.0 30 .................................... AGAAATCACATACAAGCTGCTATATGTTGG 43028 36 100.0 30 .................................... TAACGTTGTAGCGTTTCTATACCGGCCAGA 43094 36 100.0 30 .................................... CAGATTCCATAATCTTTATCTACGTTCTCT 43160 36 100.0 30 .................................... AAATTGATATTTTAACACGCTACCACCATC 43226 36 94.4 30 ..................................AT GGTTCTGAGCCTAGTTAGAATGACATAGGT 43292 36 80.6 80 ..........A..A......T...T..A....T.T. TTGACTTTGTCTCCACAGTTATATATTCTAATTTCAGAATATATTAATTGACTGTTTTAGAGTGGTTAGTTTAGGTATTA 43408 36 83.3 0 ..........A.........T....G...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================ ================== 29 36 98.6 32 GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC # Left flank : AACAGACCGAATTAGCAAAAAATATATGAATGTGTTGATCAAGAAGATTATTGAAGACATCACAGATGATGAAAGACAAGCAATACTAAAATCAGTAAATGGTTTGTATGATCATATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTACATGTGGAATTAGATAGAAAAAGAATTATAGGTCTAACCAATGTCGCGCATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTGAATCTTGTTAAGGCGACTAACGCATCAATGTTTATAATTGAATTCACAGAAAAGATTGGTCAGAGATTCTTTGAAAACTGTGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATAGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAACGTAATATTATATGATATATAATATAGTTGAAGATAAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTACGGATACTCATTGACACAGGATATGCAAAAAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGCAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGTGACTATAAAGTTAGTTTGGATTCAATTTTCGAAAAAAATAGAGAGGGGGAATAATAATGAACTCA # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [75.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //