Array 1 54450-55017 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXH01000015.1 Simplicispira metamorpha strain DSM 1837 Ga0310511_115, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 54450 28 100.0 32 ............................ TGTGGAGAATTGAGCCGTCTAAGCTGCGGGTC 54510 28 100.0 32 ............................ GTGAAAAAAGACCCCCCGGTTTCGAGCGGCGC 54570 28 100.0 32 ............................ CTGCGCGGTCGCATGAAGCGCATTCCCGGGGT 54630 28 100.0 32 ............................ TTGCGCGCTGCGGCAATCATCTTCACGATTTC 54690 28 100.0 32 ............................ GTGAGAAGGCCACAGGGTTGGGGCTGGAGGGA 54750 28 100.0 32 ............................ ACCACCACCTCTTGCAAGCTGGGCGGCTCGGG 54810 28 100.0 32 ............................ TGCCGCCCGGCTCAGTGCGGCCTGGTATTTTT 54870 28 100.0 32 ............................ TTCCGCAGATTCATCTACTGAGCCATTAAGTC 54930 28 100.0 32 ............................ AAAGAAAAGCTGCCCTATTTCCTGCGCGTTGA 54990 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 10 28 100.0 32 GTTCACTGCCGAGTAGGCAGCTCAGAAA # Left flank : TTTGACAGGTTCCCGTGGAAACCCCCTTCCTGTAAATCTGCGGCTGGAAACTGAAGTTTTATGAAGTGGCTGTGGAAACTGAAGTTCCAGCAGTGCGTGGTGCAGTGTCAAGGCATCCTGAATGCCTGCATTTGCCAGCAAACGTCAACTTTTGCCAACAGGCGAGGGGCCGTTTTCGTACCGCTCTGGAACCCCCGTCACAAAGCAAAAACCCGGCGCAGTGGCCGGGCTGGTGGTGGGGTGTGCCTCGTGGCTCAAAACTGAGCCGTGCGCCTACTTTCCCGCACCAAAGGCCAGAACCACCCCGGCCAACAGCTTGGACAGCGCCAGCGTTTCCCGTGGCGTCAGGGTGGTCACGCTGGTGGCGCGGTTTGGTGCGATGTTTTCGGCAGAATTTGCACCCTTTTCGAATTCGTCGCTCTGGCGGAAAGAAAAAGGGTAAGCCGCGCAACCATGCGCTTTCTCGTTGCGCGACAATCAATTGCCCGTTTCTGGTTCTA # Right flank : AGGAGCGCCCCACCACGGGCGCTGCTCTGGTGGTGCCCCCTGCAACCCGGGGTTGCACTGTGGCGTGGCGGTGGAGCGCCAGGGCATGGCCTGGTTCAGCGTCGCCCACCCATAGGCACCTGCTCCACAGCCCCGGTTGCCTTGTTGAAGCGGATCACGCTACCCATGCTGGTGCTGCCATCAACGTTTTTGGTTGTGGGCGTGACCTGCACCCCCCATTCCGATGGCTGTGTCTGCCCCTGCATTTCCCGCAGCCGCTGCACGATGGCCTGCCGCTTGGCCGGGTCTTTCTCCTGCGCAATTTGTGTCTGCATCGCGCTGATGAGTGATGCGCCTTGGTTCTTGATCCCCTGCGTTTCTTGCTCCAAGCCGAACTTGTCGCGCGCCAGGCCCTGTGTCTGGCCAAAGCGGTTGTTCTGCCCCACCTCCTGCATCTGCGCCCGGGCCGTGGAGCCAGCCTGCTGCATACCCTCGCGCTGGATGGCCGCGTTCTCGCGCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGAGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5099-3568 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXH01000029.1 Simplicispira metamorpha strain DSM 1837 Ga0310511_129, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5098 28 100.0 32 ............................ ACTTCAAACCGTCGCTGCTCCTGCTGCGACCG 5038 28 100.0 33 ............................ ATATCTGGTGGCGCCGTGCGCTGCGCAAAAAAG 4977 28 100.0 32 ............................ TTGCGTGTGAACGGCACCCTGCGAACACCCGC 4917 28 100.0 32 ............................ TGCGCTGGATAGAAGGCCGGGGCCTGTTTGCC 4857 28 100.0 32 ............................ TGCGCAGGCAACACAGGCGGTTCAGGCCAGAT 4797 28 100.0 32 ............................ TTCCGCAGCGGCAGCTTGGATTTTTTCCTCAT 4737 28 100.0 32 ............................ TGACAGGCTTGGGAGCCAGACGAGAACCATTG 4677 28 96.4 32 A........................... ACTCGGCGATGGTTTCCATCAGCTTTTCCTCC 4617 28 100.0 32 ............................ AACGAACGTTGCGGACCACTTCGGCCTCAACG 4557 28 100.0 32 ............................ GCACCAGGAGCACCACCATGCACCTCACTGCC 4497 28 100.0 32 ............................ ACCGCAGCCGCACTGCGCGACAACGCTGCCAC 4437 28 100.0 32 ............................ ATCTACGCCCACGGCATCCCTGACCTCAAGAT 4377 28 100.0 33 ............................ CTGGCTGGTGAAGTTGGAACGGGGCGAGTGCAT 4316 28 100.0 32 ............................ TGCAGCAGGGCCACTTTTTTGGCGTTGTCGAT 4256 28 100.0 33 ............................ GATTGCAGCGATGCCACGCGGATCAACTGCTCC 4195 28 100.0 32 ............................ TGTCAGCGTGGCAGAGTCGGTGCCGTGGCCGG 4135 28 100.0 32 ............................ CTTTCCCACGCCTCTGCCCGTGCAGCCGCCCA 4075 28 100.0 32 ............................ TCGCTGGCATGCAAGATGGCATTGCGGTGCAT 4015 28 100.0 32 ............................ AGCATGCAGGCCATCTCGGCAGCCGCCACGGC 3955 28 100.0 32 ............................ GTTTCGCGCCCATTCCTTGCGATCCACGTCAA 3895 28 100.0 32 ............................ ATTGCGAGGGAGATTTGCCCCACGAGCTCGGC 3835 28 100.0 32 ............................ ACGAGGATGCGCCAATCCCGCCAGCCTGCCCA 3775 28 100.0 32 ............................ ATACTCGCAACAAGTGGGCCTTGACCTGCGTT 3715 28 100.0 32 ............................ AGTTCCGTGCCGTCTTCGGCTTCAACTTCGGT 3655 28 100.0 32 ............................ ATTTGCAAGCCTGTTTCTCTGTGTGAAAACTC 3595 28 92.9 0 ...........C.............C.. | ========== ====== ====== ====== ============================ ================================= ================== 26 28 99.6 32 GTTCACTGCCGAATAGGCAGCTCAGAAA # Left flank : GAAACCTGCGGCTGGAAACACCTGCGGAAAAGTGCGCTTTCGCTGTTAAGCAGGCTGTTAAGTGCTCTCCAGAAAAGTGCGGTTTCGTTGGTAACCGGCCTATTAACCATGCGCTGGTAACCATCCAGCAAATGCCTGATTCCTTGGATACCAGCGTGGATACCGCCACTGGAATGTAGAGTTTTGTCGGGGGAAATTCCCGCCACAAAGCAAAACCGACGCGGGGTCGGTCTGTGTTACGTCTTTTTGTGGTTTTGTTACGGACTCGGGAAACTACTTCCCCGCACCAAAGGCCAGAACCACCCCGGCCAGCAGCTTGGACAGCGCCAGCGTTTCCCGTTGCGTCAGGGTGGTCACGCTGGTGGCGCGGTTTGGTGCGATGTTTTCGACAGAATTTGCACCCTTTTCGAATTCGTCGCTCTGGCGGAAAGAAAAAGGGTAAGCCGCGCAACCATGCGCTTTCTCGTTGCGCGACAATCAATTGCCCGTTTCTGGTTCTA # Right flank : GGAGCGCCCCCCACGGGCGCTGCTCTGGTGGTGCCCCCTGCAACCGGGGGTTGCACTGTGGCGTGACGGTGGAGCACCAGGGCATGGCCTGGTTCAGCGTCGCCCACCCATAGGCACCTGCTCCACAGCCCCGGTTGCCTTGTTGAAGCGGATCACGCTACCCATGCTGGTGCTGCCATCGAAGTTCTTGGTTGTGGGCGTGACCTGCACCCCCCATTCCGATGGCTGTGTCTGCCCCTGCATTTCCCGCAGCCGCTGCACGATGGCCTGCCGCTTGGCCGGGTCTTTCTCCTGCGCAATTTGCGCCTGCATGGCGCTGATGAGTGATGCGCCTTGGTTCTTGATCCCCTGCGTTTCTTGCTCCAAGCCGAACTTGTCGCGCGCCAGGCCCTGTGTCTGGCCAAAGCGGTTGTTCTGCCCCACCTCCTGCATCTGCGCCCGGGCCGTGGAGCCAGCCTGCTGCATGCCCTCGCGCTGGGTGGCCGCGTTCTCGCGCATGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGAATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 58060-59171 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXH01000005.1 Simplicispira metamorpha strain DSM 1837 Ga0310511_105, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 58060 28 100.0 32 ............................ AAGCACCGTTCCCTTATCAGTTCGCGCTCAAA 58120 28 100.0 33 ............................ ATCTCGGCAGCGGCGCCTTGCGTGACGCCAAAC 58181 28 100.0 33 ............................ CGGATGGAAACGAGGCCAGAATGATCCCGCAAG 58242 28 100.0 32 ............................ ACCAACCAGCCTTACATCCAGCCCGGAATTAA 58302 28 100.0 32 ............................ AATAAGCACTGACCCGACGTGGTACGAGTGCA 58362 28 100.0 32 ............................ TTCACTTCATTGTCTGCGTCACGCTGCTGGCC 58422 28 100.0 32 ............................ ATCGACGCGCAGCATGCGATCTACGAGACCGT 58482 28 100.0 33 ............................ TTAGATGAAAAATAGACGTGGCGGCCACCCTTC 58543 28 96.4 32 .....................G...... CTGGATGGCAGCCAGCGCCGTGGCCTTGAATT 58603 28 100.0 32 ............................ GAAAAGCTGGAAGCCGAACTGCCAGATGGCCC 58663 28 100.0 32 ............................ TGCTTGGCAAGGCAAAGGCCGTGCATGATGCC 58723 28 100.0 32 ............................ TGACGTGTACCCAGTCGGCTTTACCGCTGCGA 58783 28 100.0 33 ............................ ATTCGCCCGTGGAATCCCCCACCAGCGCCACAG 58844 28 96.4 32 ..........A................. ACGCCAGAAAGCGCCCCGGCCAGCCCCAGCGC 58904 28 100.0 32 ............................ TGCGAGGCCATCGTGCAGGCCTTGGACACACA 58964 28 100.0 32 ............................ AGTTGACGACAGGCCCGCAGGGGATTGCCCGA 59024 28 100.0 32 ............................ AATACACATGGGTTGTTCGGTTTGAAACCGAG 59084 28 96.4 32 ........................A... ACAAAACGGGCATGGGCGCACTGGCATGAAAA 59144 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 19 28 99.4 32 GTTCACTGCCGCATAGGCAGCTCAGAAA # Left flank : AGGCCACGTTGCAGCCCTGGGCCACCGGCACGTGGTTGGGCAGTTTGCGCGACCATGTCCGCAGCACCGCTCCGCTGCCGGTGCCTGCCGATGCGGCACACCGCACGCTGCGCCGCATTCAGGTCAAAAGCAGCCCCGAACGCCTGCGCCGCCGCCTGATGAAGCGCCACCAGCTCACCGACGAACAAGCCCGCCAGCGCATCCCCGACAGCGTGGGCCGCATGACCGATTTGCCCTATGTGCAACTGGCCAGCACCAGCACGGCGCAGCAATTCAAGCTCTTCCTGGCCTTGGGGCCAGCCCAGTCGCAACCGCAGGCGGGGGACTTCAACAGCTACGGCCTGAGCGCCACCGCCACCGTGCCGTGGTTTTGACCCTTTTTGAAGGCGCCCGCCGAGGTGGTTATGAATCAACAACTTACGGCGGCCTGAAATAAAAGGGTTTGGACGATGGAAATGCCTGAAACCCTTGCTGCGCAAGGGCTCCGGGCAGAATGGGCC # Right flank : AGAACTGGTACGACGCATTGGCGTGGCCCGCCAGTTCACTGCACCACAGGTAGCCCCAACCACCCCGTCATCAGTCACTTTTTGATAGCTGCTTGCGCATACCCTGCGCGGCTTACAGGCCAATTTGGCTTCAAATTCTCATGGCATGTGCGCTGGTGCTGGCACGGTATAGCGCTGGTCGGGGTGGTTTTCCTGCTCTGGCAGGGTGTAGGCCAGTACGCCGCTGGCCACCATGGGGCTGAGGTAGTTGCGCACCAGTTTCTTGTGGTCTTGCTTGCCCAGGACGAGGGCAATCTCGCGCGAGCTCAGAGCGCGCCAGGCGCACAGGTCGCGCAGCAGGTCGTGCAGGGCTTCGCGGCGGGGTTTGGTGCCGGGCGCGGGGATACGCGCCAGGATGGACTCAGGAATAGACCCCAGCATCTGGTGCCCATTTTCAATAGGCTGGAGCCCATCAGGGCCAATGTGGTGCCCATATTCGCTTGACTGGTGCCCTTTTAAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1428-799 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXH01000010.1 Simplicispira metamorpha strain DSM 1837 Ga0310511_110, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1427 28 100.0 32 ............................ ATTCTCAAGAAGCGCCCGCAGGTCGCCGCCAT 1367 28 100.0 32 ............................ ATGCGGGTGTCGATTGGGCTGTGCGTCACTTC 1307 28 100.0 32 ............................ GTGAACCGCTATCCCCGCAAAAGGATAGACGG 1247 28 100.0 32 ............................ AACACCAAACTGTCGCGCTTGCCAAACAGGTA 1187 28 100.0 33 ............................ TTTGCCGGTTGGTGGAAGTCCAAGCTGTCGTGC 1126 28 100.0 32 ............................ AAAAAGCTAGGCTCAACGTCCAAGCAGGCGAT 1066 28 100.0 32 ............................ ATTGTGGCTCCTGTTTCTGGGATGCTTGCTAC 1006 28 100.0 32 ............................ AGACAGATAGCCTTGCGCTATCGCAGGCGTTC 946 28 100.0 32 ............................ TTGACGAGCGGTTTGCCTTGCAAGACGCCACG 886 28 100.0 32 ............................ ATGCGGGTGTCGATTGGCGAATGCGTCACTTC 826 28 96.4 0 ........................T... | ========== ====== ====== ====== ============================ ================================= ================== 11 28 99.7 32 GTTCACTGCCGAATAGGCAGCTCAGAAA # Left flank : CCCGTGCGCGTACTGCGTTGGATTCCTTGCCGTAACCTTGCCGTCCGTGCGCGTGACCGCCTCCGAAAATTCCAGGGCGCAAACCTTAGTGTTCACGCCCGCAGCATCACCCCAACATCACCCTCGCCCTTTCCTCGCCCCTGTCGCCAACGGCCTGCGGGAACTGGACTCCCGCCACTGACGGAAGTTAAGCCGCGCGCCGAAAGCAAAAACCCGGCGCAGGGGCCGGGCTGGTGGTGGGGTGTGCCTCGTGGCTCAAAACTGAGCCTGCGCCTACTTCCCCGCACCAAAGTCCAGAACCACCCCGGCCAACAGCTTGGACAGCGCCAGCGTTTCCCGTGGCGTCAGGGTGGTCACGCTGGTGGCGCGGTTTGGTGCGATGTTTTCGGCAGAATTTGCACCCTTCTCGAATTCGTCGCTCTGGCGCAAAGAAAAAGGGTAAGCCGCGCAACCATGCGCTTTCTCGTTGCGCGACAATCAATTGCCCGTTTCTGGTTCTA # Right flank : GGAGCGCCCCCACGGGCGCCGCTCTGTTGGTGGCCCCTGCAACCGGGGGTTGCAGTGCGGCGCAGGCGCTGGCCACGATCTCGGGCAGCCGGAAGAACGCGCGCATCTTGGCGTTGTCGCGCGTGATGCCTGCGCGGCTGCTGATGGCCTTGACCGTGCCCAAGGGGATGTTCAGGGCCTGGGCCACGGCGCGGGCCGATTGCGTGCGGCGCAGCGCCAGCACCTGGGCGCGCAGCGGCGGTGTGGTGGTGGTCATGCTGGGCACCTCACCAGTCCAGCGGTGCGCCGTCATCGAGGCCGCTTCGATCTCGCGGCGCCATCGCCCGCCACGCTTCATCCCTGGGCCTGCCATGCGCTGGCGCTGGCGCTGGCGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGGGCTGGTGCTGGGGCTGGTGCTGGTGCTGGGGCTGTCGCGTTTTGTCGCACGGTGTCGCGTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGAATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //