Array 1 95003-94830 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNA010000025.1 Streptomyces sp. GMY02 strain GMY01 contig01601, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================== ================== 95002 35 100.0 34 ................................... ACAGCGCACCCGCACCCGAAAGCCCGACGGAGCG 94933 35 94.3 34 ......................T......T..... CCCACGAACCCACACCCGACAACCCACCGAAGCG 94864 35 97.1 0 ................................A.. | ========== ====== ====== ====== =================================== ================================== ================== 3 35 97.1 34 CCCCGCAAGGGGCGCGGGGAACGGCGCGCCCAGCC # Left flank : TGCGCGACGGGCGTCCACTACCGTGCGCTGTGCCCGCCCTTCCTGATGGAGAACCTGCTCGGCCAAATCCCGTCGATCCGCGACCGGGGCGAGTTCGCTCTGGCCATGGGCCGGGACCGCGTCCTGCGCACCTGCGCGACCCGTGACATCGCGGCCACGGCGGCCCGGCTGCTGCTCGACGGCTCCTGGAGCGGTCAGCGGGACGTCCCCACGGTCGGCCCCGACGCGCTGACCACCGAGGAGATGGCAGGTGTCGTCTCCGAGGTGCTGGGACGCCCCGTCCGGGTACGGCGGACCGCCCCGGCGGAGTACCGCGAGACGCTGCTGCGCCTCGGGGCCTCCGAGGCCTGGGCCCAGGGCCTGGCCGACATGGCCCAGGCCCTCGACGACCAGGACTTCTACGGCGTCGGAACCCCCAGCACCCCGGACACGGCCGCGACGAGCTTCCACCAGTGGTGCGAAGAGACCCTGAAGCCGGCCACCCGAACAACCTGACCCAC # Right flank : CCCACACACCCGCACCCGAAAACACCGAGCAACCACCCAAAAGCCGCTCAAACCCCCGGAGGACACTTCACCGCTCCAACAGCATCCGCTGCAACTCCCGAGCCGCCCGAGGCGGAGCCACATCACTGCGGTGCGCCAGCGCGATGGTCCGGTGCAGACCGGGCCGGACCAACGCCGTCACCCGCAACCCCCGCCCCGACCGAGTGGCGACCATCCGCGGCACCACCGCCACCCCCAGCCCCGCCCGCACGAACCCCAGCACCGCGTCCATCTCCCCGCCCTCCACCGCGAACTCCGGCTCGAACCCCTCCGCCCGGCACGCCGCGACCGTCAGCTCCCGCAGGTCGTACCCGTGCCGGAACATCACCAGCCGTTCCCCCTCCAGATCGGCGATCCGCACCGTCCGCCGCCCCTCCCCGCCGGGCGCCGCCGCCTCCGGCGAGGACACCACCACCAGGTCCTCCCGCAGCAGCTCCACCGTGGTCAGCGCGGGCGACGGC # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCGCAAGGGGCGCGGGGAACGGCGCGCCCAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.90,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 25680-24553 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNA010000067.1 Streptomyces sp. GMY02 strain GMY01 contig00202, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 25679 29 100.0 32 ............................. TACGGGCAGCTATCGCTCGGGGCGACCTACGC 25618 29 100.0 32 ............................. TCTCAGTGGTTGTTGTCGGCGGTGACGTAAGC 25557 29 100.0 32 ............................. GTGCGGTCGTTCCTGTCCCAGAGAGCCACCCG 25496 29 100.0 32 ............................. TGGCTTCAGGAGGTGCCGGGGATCGGGGCGGT 25435 29 100.0 32 ............................. TGTTCCTCGCCTCCCACACAGCGCAGGAACTG 25374 29 100.0 32 ............................. TCGTTGCCGCTCACCTCGAAGGCGAGCGCGAG 25313 29 100.0 32 ............................. GACCGACCGGTGCCGTCCGCCTGCACACCCGG 25252 29 100.0 32 ............................. GTCTCCTGATTGCGGGAGTCACGCATGTCCCA 25191 29 100.0 32 ............................. TCGAAGCGGCCGGCGCCACCGACATCGAGGAG 25130 29 100.0 32 ............................. CAGTTTCCTGGCTGCTTCGAGGTATGCGCGGC 25069 29 100.0 32 ............................. TGATCAACGGGGGCGCCGCGTAGGGCGCTGGG 25008 29 100.0 32 ............................. TGAACGACGCGCCCGGTCCACGGGTCCCAGAG 24947 29 100.0 32 ............................. GCGGGCAAGCGGCACGCCCAGGCCGCCGCCGT 24886 29 96.6 32 ......................C...... ATGACCGCGCCCTGGTGCGCTGCCTCCATCGG 24825 29 100.0 32 ............................. ACGACGGCCGCCTCCCGGATCGTCGTCTCGTG 24764 29 100.0 32 ............................. ATCGCGCACCGCGTGATCATCGGTGCCGACCC 24703 29 100.0 32 ............................. GGGACTCCTCGTGGGTGGTGATCTGCAGAGCG 24642 29 100.0 32 ............................. TGCTCGCTGGCGTAGAGCGGGTCGCGGATCTG 24581 29 82.8 0 ...A.................C..C..TT | ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.9 32 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : GGGCCGCACCGGCCGCCGGCGATCTTCTGCTCCACCGACGACCAGGCGATCGGCCTGCTGCGGGCCGCGCGCGAGCTGCGCATCGACGTGCCGGGCGAGCTGGCGGTGGCCGGGTTCGACGACATCAAGGAGGCGGCACTGGCGGACCCACCGCTGACGACGGTCGCCTCCGACCGCTCCGCGATGGCCCGCTCGGCGGTGGACCTGGTCCTGGACGACGGCCTACGCGTCGCCGGCTCGCGGCGCGAGCGACTGAAGGTGTTTCCGTCGCGGTTGGTGGTGCGGAGGTCTTGCGGGTGCGCTTGATGCCGCTGGGGCGGGGGGTGTGTGGGGGTGCGTGTAGGGGTTGTTTCGGGCACGGTTAGTTCTTCTGGGATGGGCGGAACGGTTTCGGGTGGTGGGTGCGCCGAGGTAACGGAAGGCGGTGCGGATATGGGCGGCGCTTTGGTAAAGCGGGTAAAACCGACCTCTTCGCACAACATAACCGCAGGTCAGCTCCT # Right flank : CGGGCCGTCCCGTAGGGGGCGCTGGGGGGCTTTATATCGGGCATACGCGGTTCTGTCGGGCTTCTCAGGGGGGCCTCAGGAAGCTCTCATGATCCCGGGTCACTCTCAATGACATGACCGAGAGCATCCGCCGCAGCGGCGAGTACGAGTACCCCCAGGGTGACGGGCAGGATCCGTTCGCGTACCGGCAGCAGCACGCCTCCACCCCCGTGGACCCGGAGTGGCCGCCCCCGCCGGCGTACCCTCCGGCGCAGCCCCCGGCCACCGCGCCGACGGCCGCGTACGGCCACGGTGGTCACGGCGGCGGCGGTTACGACGGTGGCGGTCACGGCGGCGGCGGTTTCGATGGCGGCACCGCTGTTCTGCCGGGCGCACCGGTCGGCGGCACCGCTCCCGCTGCGCGGAAGCGTGCCAAGGGGCCGCTCGCGCTGCTCGCCGCCGTGGCGATCGCGGCGGCGGCCGTCGGCGGCGGCACCGCGTTCGCCATCCAGGAGCTGACC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 21643-20812 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBNA010000014.1 Streptomyces sp. GMY02 strain GMY01 contig02302, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================================================================================== ================== 21642 30 100.0 31 .............................. CCTCGTTAGTTAGCCGCATGGCCTGCTGGAG 21581 30 100.0 31 .............................. GGGACCAGGTGATCCCCGCCGGGCGATCCTG 21520 30 96.7 31 .............................C GGCTCAAAAGAACGACACGACCGACCTTGAC 21459 30 100.0 31 .............................. ACCCAGACGGCACCTCCCGGGCCTCCGCTGT 21398 30 96.7 31 .............................C GACACCAACCTCGCCGACGCCCTGGCGGCCG 21337 30 96.7 31 ........A..................... GCGTCTCAGACCGGCCGCGTGCCGAACCCCG 21276 30 100.0 31 .............................. TGCCCGGAGCCGGGCCAGATCCGCATCGACA 21215 30 83.3 158 ................T..AC..C.....C GCCCCTTGCCGGCCTGAGCGGAAGCAGCACCCCCGGATGGTGCACGTCCCAGCGTGAGCGGCTTCTTCGGGTGAACTTTCCCGTTTCCCCCGCCTGTACGGACAGGGCCGTGTTCAATGAGCGACGCCGGTGTTCCTAAGGACTTCCGGACGTAGCAT GT,A [21186,21192] 21024 29 80.0 32 CC.......T.............A.-...C TCGTCGGCCGCTTCCAAGCGGAGCGGTCGCCG 20963 30 86.7 31 .C.......A.A.........A........ TGGCCGTGACCATGCGCGACCGTCGTGCCCA 20902 30 93.3 31 ........................A....C GAGATCATCAGCCACGAGGTGCACCGTACCC 20841 30 90.0 0 A..C....................A..... | ========== ====== ====== ====== ============================== ============================================================================================================================================================== ================== 12 30 93.6 43 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CGGCCCGGCGGTCGCCGGCGCCCAGGGAAACGCAAGGGCCCCCCACGCACCCGCCAGAGCCGACCTACCCTTGCTGCCTTCCGGCCCTGGGGGAGTTCAGTCAGATAGCGCCGCGTGAGGGGCTGCGAGAAGCCTACCTGATGCGGACGGTGCGGAACGAGTTCGCGAGCACTCCTCTCGGTCATGTAATGTTTCCGGCGGAGGATTCGCCTAGAGGCCTAGGGCGCACGCTTGGAAAGCGTGTTGGGGGCAACCCCTCACGAGTTCGAATCTCGTATCCTCCGCAGCCCGCTGCACAGCGGACAAGAGGGCTCCGAACCGGAAACGGCTCGGAGCCCTCTTCGCATGCCGTCCACCCGAAGCTCCCACCCTCACGGCTACCGCGAGCCGGAGGCCTACGAGTCTGGAAGCGAGAGATGCCAGAGAAGAGGCATATGCCGGACTCGGGGAAAGCAGGTAAAATCGCTCCCCAGCCCAAATAAACCCCCAGCTCACCTCCT # Right flank : AAGCACCGGACGCAAGTGAGGAACCGAGAACATCATACCGTGGTGTAACCCGAGCAAAAAAAGCAAGTCCCGTTCACTTTTGGACTTTTGCTGCGCCTGGGCTGCTCCAGCACAAGGCTTGGACGCGCAACACCTCGAACCTCAAAAAGGGCCACGGGCCCCGCGTCGGCAGCTCCCTAGGAAAGAGGCCGGGATCGCGATAGGCCCGTGGCCGTCACTCAGCGCGAAGCATGAGGACGAAGGAGAGCTTACCCGTGCACCCCTTGATCCCACCCGACAACAACCCCACCTGGTCCCTCATCGTGGCCATGATCGCCGCCTCGCCGCGCTGGCCCTGGGTCTGGGCCGGACTCGTGCTCCTCGGCGTGGCCCTCACGCGTCGGCAGCAGGTCTGAGGCACGGGTGGGCGCCCGGCGGACGGGCGCCCACCCTTCCCGCCTGCCGGCTCGCCAATCCGTTTCGGCACATCGGGCGCCCACAGCTCAACCCACTCGCCGTGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //