Array 1 50998-50088 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BCXL01000005.1 Bifidobacterium breve strain BR-06, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
     50997	    33	 100.0	    34	.................................	TGCACGACCGGGACATGAACGCCGCCCTGAACAT  	
     50930	    33	 100.0	    33	.................................	GCCAACGTGGGACGCATCCCCAACTTCGACAAG   	
     50864	    33	 100.0	    35	.................................	AAACCGGGACGCAACCTCACCGCATGGCAGGCCGT 	
     50796	    33	 100.0	    33	.................................	TACGCGTCAATGTACGGCAAAGGCGACGTGTAT   	
     50730	    33	  97.0	    34	...................A.............	TCGTCAAGCAGGGTCTTCAAAATCACACCCGGAT  	
     50663	    33	 100.0	    33	.................................	CTTTCATCTGATTGGAACGACGCTTCCGATTCT   	
     50597	    33	 100.0	    35	.................................	AGGTACAGCCAGTTGAACACGGCTCCCATCCCGTT 	
     50529	    33	  97.0	    35	..................G..............	TTCGAGTCGCAGGCCAACGGTGCGGAAATCTACTA 	
     50461	    33	 100.0	    34	.................................	AGTGCTTTCCTGTCCTTGTCAGCAGGCATCGGAC  	
     50394	    33	 100.0	    36	.................................	GTAAATCTCAGGTTGCGCGAAAACACATGTTTCGAC	
     50325	    33	  97.0	    35	....A............................	TGGCTCGCCCACAACTGGTACTAAGGAGCGGGACA 	
     50257	    33	  97.0	    35	............T....................	CTGTACGGCAAGGCTCAGACCGGCAGCGAGGGCTG 	
     50189	    33	 100.0	    36	.................................	CAAGCCCCCATACCCCGCGCAGCCCTCAAATCCAGC	
     50120	    33	  84.8	     0	.............T...........G..CCT..	|                                   	
==========	======	======	======	=================================	====================================	==================
        14	    33	  98.1	    35	GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT	                                    	       

# Left flank :   CCGGACCTTTCCCGAATGGAACTAGAAGCACCATCAGGCTAAGGCCCACGGGTGGTCGGCATGCCTTTCCGCCTAAACCCGAAAAACCTTCGTGACTAAAACCTCAACTTCCTATTGAACAAAAACACGTTCAACGCG
# Right flank :  GCCGGATTAATACGTTGGTTGATGTCGGTATCGTCCCATCTATCCTTGATATAAGGATTTGTGATGGGGGTAACGATATCAGCTTGGTTCCACTGGTCAACGTATGAGTATCGGATACGGTTCGGTGCGTATGTTTCGATCATTCGCTGATAGTAATCGCGTTCATTAAGAAGCAGGTCCACCAGATATCCGGGTTCGTTTGGGAAATTCTTTAGTGCGCGAGTATAAAGATTGTGGTGTTCGTCCAATACCAGAGCTGGAACGGAATCTAAGCGCAAGAGTTCTTTAAACATGACGAGTCGCCCAACTCGACCGTTACCGTCGGAGAATGGGTGCGTGGATTCGAACATCCAATGTGCTTTTGCGATTGCAAAAGGATCATCTTCCAATTGTGAGTACAAGCTGAATACCTGTTTCATGGCAAGAGGCACATCTGCGGGGAGTACCGTATGAATTCCCTCAAGTTGGCTGATGACGTTGGGCACTATTTTGTATCCGCC

# Questionable array : NO	 Score: 9.16
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [7,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-8.40,-8.50] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [7-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.41   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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