Array 1 16717-19785 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNOS010000025.1 Clostridium sp. NSJ-145 ZM-GN-D10-39_ctg025, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 16717 30 100.0 35 .............................. CTGTTCTGTGGAAGAAATTCCCCAAATGAAATTTT 16782 30 100.0 36 .............................. GTTATAGAAGAGTGGAATAATTTGAATCTTTCTAAG 16848 30 100.0 36 .............................. ATTTAACTACGATAAAGATTATAAAGATAAATTATT 16914 30 100.0 36 .............................. ACGCATAATTCGCAAGTAGATTCGCTAAAAAACCAA 16980 30 100.0 37 .............................. AATGACTACTAGAGAAATAGTTAGAAATTATATATAT 17047 30 100.0 37 .............................. GTGGGGTGTATTATTTAGGAATACTAATGGACAAACT 17114 30 100.0 36 .............................. AATTAAATGAAATATTGTATAAATTAGAAAATGGTT 17180 30 100.0 36 .............................. ACCTTCTATTATCATTAATTCAATTTTAACTGTTCC 17246 30 100.0 37 .............................. TTTGACCAATTGTGTTATTTGTGTTCTGTTCTAAAAG 17313 30 100.0 37 .............................. AGAGCATTAAGAGGTCGCAAAACAGAGTTCAAGTAAA 17380 30 100.0 35 .............................. TCCACACCTTATTAACATAATGTTAATAACTCTTT 17445 30 100.0 36 .............................. AAATATTAAAGCTATGAGAGATAAAGCTTTACAAAC 17511 30 100.0 35 .............................. TGATATTATATATATTAGTAGCTTTAATAAGTTCC 17576 30 100.0 37 .............................. ATATATTGAACGCTTCTAGCAAACGCCATATGTCTAG 17643 30 100.0 35 .............................. GTAGTTAACCATATTGACGGAGATAGAACAAATAA 17708 30 100.0 36 .............................. GAAGAGCAACAAGCAATATTAGAGCAATATCCAGAA 17774 30 100.0 36 .............................. TTATCTAATGATGGTGTAGTTTCTACTACTTTTATA 17840 30 100.0 35 .............................. GATAAAGAAGACCTTATAGCTGGTCAAGATAGCAC 17905 30 100.0 36 .............................. GCGTCTATAACATCTGGTGTAGCTATAAATCAACTT 17971 30 100.0 37 .............................. TCTAATAGTAGAATGTTGTTCAACATTAGTCTAGCAA 18038 30 100.0 36 .............................. ATTGGAAGTCAGGTAAAGCAAACTGGTGGAGATGAT 18104 30 100.0 36 .............................. TAAAAATTAACTTCTTATGTATTCACCCTTGAAGTA 18170 30 100.0 36 .............................. TCTGTATTTTGGGCAACAGTAGAAAATAATAGAAAT 18236 30 100.0 36 .............................. TTTTTTACCTCCATATAATAAAAGCCGCATATCCTA 18302 30 100.0 35 .............................. GTATATATTCCCATCATGAATAATAGGTAATTTCT 18367 30 100.0 36 .............................. TAAAATTAAGAGATTTATATTCATTTTTATCATTCG 18433 30 100.0 37 .............................. TTCTCTAATCTCCTTCTTCCATATATCTAAAAACTAA 18500 30 100.0 36 .............................. TGAAGTAACTCTCTTTTAATTTCTATCATCAATCTC 18566 30 100.0 36 .............................. TTCATTATGTTCAAATGCTATGACTTAGAAGATAGC 18632 30 100.0 36 .............................. GAAATAGCACAAAGATTAATGAACGAAGAGAGTGTA 18698 30 100.0 34 .............................. ACAACATTGCAATATAATCAGGTTTTAATAACAA 18762 30 100.0 36 .............................. GAATAACAAGTATTCTCTTAATTCTCATCTTATTTA 18828 30 100.0 35 .............................. AGTGAAACTGAACCAAGCTTAAAATTTAGGGGAGA 18893 30 100.0 36 .............................. TTAAGAGTATTAAAAAAAAGGGGGGTAACTCCCCCC 18959 30 100.0 36 .............................. TATGGGTTGGCAAAAAAAGCAGAAATTAGTATAACT 19025 30 100.0 36 .............................. TTGTAAATTAAAAATAATTCTTTTAACATTCTCAAC 19091 30 100.0 36 .............................. GGTGATTTGCTGCTTGTATGCTCAATTAACTTAAAA 19157 30 100.0 37 .............................. CAATATAAAAAGTATATTTATATAACTAAATTTAACC 19224 30 100.0 37 .............................. GGAATTAATTAATAATACTATATTCTTATATTTATGT 19291 30 100.0 37 .............................. CTTGTCAACAATTATCCTGCTATAAAATGTCAAGAGA 19358 30 100.0 37 .............................. GTTAGTACAGATTCATCTTTATTGTAATAATCAAGTA 19425 30 100.0 36 .............................. TTCTTAGCTTGTATTTTAGCATCCTGTAACAGTTCC 19491 30 96.7 37 ...................A.......... TAAAGGAATAATGACTATCTTAGAACACGAAGGTATA 19558 30 100.0 36 .............................. CAAGCTTCATCTAATAAGTCTATTATTTTTAATTCA 19624 30 100.0 36 .............................. AAGTTTATGGGAGTAAGACGTGATGCACAGGTTGCT 19690 30 100.0 36 .............................. GCTGGTTATGTAGGAGTTCAATATTCTGTAAATGGT 19756 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 47 30 99.9 36 ATAGCAGTAGCTCCATATTGGAATGTAAAT # Left flank : AGAATATGAGCCGTTTAAAATATGGTGGTAAGGTTGGTACAGTATGTATGTAATATTAGTTTATGATATAAAAACTGATTATCAAGGGCAAAGAATTTTAAATAAAACATTCAAGATATGCAAAAAATATTTATCGCATATTCAAAACTCAGTTTTTGAAGGTGAATTGGCAGAGTCGCAAATAGTTAAGCTAAAATATGAATTAGATGGTATAATAAGAAAAGATGTTGATTCAATAATTTTATTTAAAAGTAGAAATGAAAAGTGGCTTAATAAAGAGATGTTGGGTAAACAAGAAGACAAAACTAGTAATTTTATTTAATTGTCGACCTGACATAATGTTGAAATATATGCATAAAGACAATGCTAGGTATAATCAATGTTTATAAGCAAAACAACATAATAAATAATATAATAACTTTAGTGTATTTACTATATATTTAAAGATAGACAGGAATAGTATGTGAATACTAGTGATATCAATAGTTATATAGTAACGG # Right flank : TCAAACTATAAATCGTATAATTGACGTGTATAAATAATAAAAAATAAGTAAATTCATGTGCGCGTACACGCATACACACGCGTATAGGAAAAAAGGGGGATTATTCCATATTATAAGCTGTAATATGGTTCTTAAAGTAGAGTTTTAGCTTATGATAGAATGAATCGTAGCATAAGCAAGTGAGGTTTATAGTTTTAGGCATTGAAATAACTTGCCTAAGGTTATTTTTACAGTTAAAAATACCGTGTCATAAGTAAAATTTAATTTACAAAATATGTTATAATAAGTTAAGAAATGTATTTAAAGTGAAATATAAATTAGCTACCTATGGAGGTAAAATGAATAAGGTATATTTAGATGTAACAAAAAGAGAGAATTGTCCAGATATATGTGTATTTATAAAAGATACGGAAGTCATTAAGTCAGGTAGCTCTGTTTATCATATGAGTTTAAATGAAAAAAATGAAACTTATCAACAATATGCTGATGAGTATGATATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAGCAGTAGCTCCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.40,-2.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //