Array 1 6506-5937 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGIBV010000006.1 Wohlfahrtiimonas chitiniclastica strain DSM 105708 NODE_6_length_169871_cov_266.957395, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6505 28 100.0 32 ............................ ATCCGCGCACGAACTCAACCGCGTCGCCTTTT 6445 28 100.0 32 ............................ GTAAGAAGTTTGCCAATAACTATGGCATGTTC 6385 28 100.0 32 ............................ ATGAACATGATTCGCCGCATCAATGGTAAAGA 6325 28 100.0 32 ............................ TTGTGAAAATATCGCAGATGCTTTGGTATACC 6265 28 100.0 32 ............................ ATGGTTACTCCTTGAGTTTTTCAATTTCTGAA 6205 28 100.0 33 ............................ AATATAGATCGCTTCATAACCACCGCATGAGCC 6144 28 100.0 32 ............................ TTTAAGAAAAACACCTGTTACTCTCGATGGAT 6084 28 100.0 32 ............................ GTTGGTCGGGATATAGACTAGATTGCGCATAA 6024 28 100.0 32 ............................ AACATCGTGACCGCGATTATCGACGAACCAAC 5964 28 78.6 0 .............C...A..T..T.GT. | ========== ====== ====== ====== ============================ ================================= ================== 10 28 97.9 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TTGAATGCAGGTTCGTGGCTGTCACGCTTGACGGATTATGTGCACATTTCTTCCATTAAGCCGGTGCCTAATCGTGTGACGCATTATGCGATTTATCAGCGTAAACAGGTCAAAAGCAGTGTTGAGCGTTTAGCGCGCCGCTATGCTAAGCGTAAGCATGTGACATTTGAGGATGCCATGGCACATTTGAATGGCAAAACGCCAGAATATTGTGATTTGCCTTATGTTCAGATGAAAAGTGAAAGCACGGATCAACGTTTTCATTTATTGATCCATAAAGTAAAAGTGACAGCACCCACGGAGGCGGCAAACTTTACAACGTATGGTTTGAGTCATCATGAACAATTGTCTGCTGTCCCTGAATTTTAACCAATGTTTTTTGCTCTTTAAAAATTTGGATAAAAATCAGTAGCTTATAAGATAAGGAAAAATCATTGGTCTTTTCAGGTAAACTACCTTCGATCAGTGATTTTTCCTATCTTTTGTGCCGAAATTTTACA # Right flank : TTGAATTAAGCTGTTGATTTTTATCTAAAAAATAAGGGTATATTTTTAATATACCCTTATATGTACCTTTATTTCTGAGAATCAACCCATTTTTTTATATCAGACAATCTCCAACGTGAAGATGTACCAAATTTTATTGGGGCAGGGAATCGCCCCTTTTGAATGGCTTCATAGATCCATTTCTTATTAAACCCTATGATATTTGATACATCTGAGATTCTTAAAAATCGGTCTGTCTCCAAAGGCTCATCTTCAGAATTTAATTGATAGATGATATTTTGTACCATTGCTTCAATGTTTTCAATTCTCTTTGATGAATGAGGATCGAGTTGTACTTGAATCGTTGTCATATACTCTCCAATCAATAATTTTTAGGCAAACAGCTCAATTTGTGATTGTTTGAGCAATTTTGCTTGTTGTTCTTTAGCAGATATTTCTGCTAATCGTTTTGCTTGGTTACCACTTACAACATCAACAAGGTGAGCAAAGTTTACAGAGGT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 131748-131158 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGIBV010000006.1 Wohlfahrtiimonas chitiniclastica strain DSM 105708 NODE_6_length_169871_cov_266.957395, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================================================================================== ================== 131747 27 75.0 174 .......ATG...A.C...-....T... GGTTGCGCGGTTGCAGGTGCGATTGAGCATGCGGACACTTAAGACCTTTATGGTTTGATCTTTAAAAATTTGGATAAATATCAGTAAATTACATGTCATTGGAATAGGATTGGTTTTATGGCTATAAACTGCCGAAATCATGATGTTTCCAATGGCATTGTGATAGTTTTTACC T [131744] 131545 28 100.0 32 ............................ AAAGCAGGAAATAAAGGCACGTTGTCAGAAAC 131485 28 100.0 32 ............................ TCCTGAACCTGCCAGATTAGAAGAACCTTGCC 131425 28 100.0 32 ............................ TATCTCTATCCTTACCAAGCAAATAATTCATT 131365 28 100.0 32 ............................ TCACGCGACATATTCAACGCTTCACTTACAGC 131305 28 100.0 32 ............................ GCGATTATCGACAAACCAGCTTCTTACAAATT 131245 28 100.0 32 ............................ TTGATACTGGGAAGAAGGAGCCAAGGCAGGCA 131185 28 96.4 0 ....................T....... | ========== ====== ====== ====== ============================ ============================================================================================================================================================================== ================== 8 28 96.4 52 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ACAAAAAATTTCTGTGCGTATCGTCAATGAAGTTAAACACGTGAACCGCATTGTGTATGACATCACAAGTAAGCCACCTGCAACGGTGGAGTGGGAATAATTTAGTTTCCACGCATTGACATGAACATAAAAAATGGCCTAAATAAATATTAGGCCATTTTTTTTAATGATTTTTAGGAGAGTTGAATGAAAAAATTATGGATGATTACAAGCATTATGGCAGTTTTAACAGGTTGTGCTTCTGTTGAGCAAGATACCGTGGTGCATGATTTTACTGCATATGGCAAGCTCAATGAGCCATGGCGCATCGTGGTCAAGCATGATGATCAGTTAGAGATTGAAGGGGTAATGGTTCGAGAGGGCGCATTGAAAGTGACGCGATCGGCATATGCAAAAGGTGTTGAATTCTCAGGGGATTATGATGGGCAGCCATTGACATTAAACATCCGCTCATTGAAGTGTAAAGACAGCAATGGCGATGAAACAGACTTCACTGCCAC # Right flank : GACCGGAGCTGTGCCATCGTAACGGGATTATGAACAGACAGTAAAATTAATGCTTTAAGTTACTCGCCATAATACGCCCAAAGCAGGACAGGTTTTTTCTTGGTTTGTAAAAGCTTGTCCACTTTGCGCATTGTGTCATCATCCACAACCGGGCAGCCTTGACTGAAACCTAAAGGCAAATAGTTTGGGAAAGTTTCTTCATTCGGAATCATCTTAAAAGAGTGGAGCACAATGTAACGCTTAAACGCATTGCTGTTACTCGCCTCTAGTCCATGGAGTTTGTAGTGAATGCCAATTCCCCATTTGCTCGGTGCGCGGATGCCCACACGGTATTTACCGAGAGAAGATGCATAGCTATTCGGTTGATTGCTAAAGACAATGTTTTGATTATCACTCTCAAAGCCCACATTGCCATAACCATGGGCAACGATGCTTTTGATCTGCGGTGATTGTGTTTTAAAATTCCACACAAAAAAGCGATCTTTACCAGAATGGCGCGC # Questionable array : NO Score: 3.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:-2.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //