Array 1 11108-12906 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAND01000021.1 Acidomonas methanolica NBRC 104435 strain MB58, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11108 29 100.0 32 ............................. GCTCGTGCTGTCATACGTGACCGTCACGCTCG 11169 29 100.0 32 ............................. ATCTGGTGGCCGAATTTATACGCAGCTAATTT 11230 29 100.0 32 ............................. GTCTCGGCACATAACATCGGGGTGGGCGTTCC 11291 29 100.0 32 ............................. GTGACAGCTCCTGTCACAGGCGACGTCACGGG 11352 29 100.0 32 ............................. GAGTGGATGTTCAGCGCGCTCCCTACTGGCTA 11413 29 100.0 32 ............................. ACGGCAGCAGCAGCGGCAGCACAGACGATGGC 11474 29 100.0 32 ............................. CATTTGCACTATCTACCGCGACTGGAGTTATG 11535 29 100.0 32 ............................. CTAGTCACACAGATTTTTCGGATGTTCACACA 11596 29 100.0 32 ............................. GCGCCAGATGGCGGAAAACATAGGCGCACAAA 11657 29 100.0 32 ............................. CCGCATGGCTGTTGAAAAGGGTTTGACAAAAG 11718 29 100.0 32 ............................. GTCTGGCTATCCATCATCTTCACAAATGGGAT 11779 29 100.0 32 ............................. GCCTATCTTGACCTGTATATGCCGGTGATAAA 11840 29 100.0 32 ............................. AATACAACCACCGTATTCAATATACGGCCCAA 11901 29 100.0 32 ............................. GATGACGACGAAATCAGGCTCCTGACATGGGG 11962 29 100.0 32 ............................. GGCAGGGAGCCGACTAAGAACGCGGACAAGGT 12023 29 100.0 32 ............................. CCTTCAGTAAATGCTCCAAAAACAGCCATGGA 12084 29 96.6 32 ............................T GGTCTGTGGTAATGGGCATAATATCTCCATAA 12145 29 100.0 32 ............................. AGGGCGCTTTATACGGCGGCTCTAAAGGCGGG 12206 29 100.0 32 ............................. CGGCTCGGCCCGCGCCACTTTGCCCCGGCTTG 12267 29 100.0 32 ............................. CTCCGGCGCGCATGAGGATCGTGCTGCGTGGC 12328 29 100.0 32 ............................. GGCTCCCTCACGCCGGAAATTATCGGCGGTCC 12389 29 100.0 32 ............................. TGATGGAAGGCATCCTTGACTCTAAGTCGGTC 12450 29 100.0 32 ............................. ATCCGACACCCCAGATTATCCGCTGGATCGGC 12511 29 100.0 32 ............................. GAATGGTGGTGACCCGTCGCTTCGCCGTGCGC 12572 29 100.0 32 ............................. GACGATCCGGGTCTGAAAGCGGCAGCGGAGAT 12633 29 100.0 32 ............................. GCAGCGCGGGCGTCTTCGGTAACGGCTGCGTC 12694 29 100.0 32 ............................. GTGACGATGAAATCCTGCCAGTTGATCTTGTA 12755 29 100.0 32 ............................. GTCACCGCAGAGAGCCAATACACGCCGGACGG 12816 29 100.0 32 ............................. CTGTCCGCGAACAAGCCGCTGCTTACGCCGGG 12877 27 86.2 0 .....A...................A.-- | GTC [12899] Deletion [12904] ========== ====== ====== ====== ============================= ================================ ================== 30 29 99.4 32 GGCTCCCCCGCACACGCGGGGATCGGCCC # Left flank : GAGGCGACGAAGAAGCCCGATATGCCGATCGAGCGGATCACTCGGCGCCTGGCTGGCGGCATTTTGCAGCGAGAGGGCGTGATTCCCGCCATGATCGACCGGATCAAGGCCTTGTTTGAGCCGGAGGTATAGCGCGTCATGCCGATGACCCTGGTAGTGACGCGCGATGTGGAGGATCGCTACCGTGGCTTCCTCTCCTCGGTGATGCTGGAATTGGCGCCGGGGGTCTATACCGGCCCGCGCCTGAGCAGGGCGGTTCGCGAGCGGGTATGGCGGGTGCTGAGTGAGTGGCATGGAGAGCTTCGGCGCGGGTCGATCATCATGACCTGGCGGGATGTGAACGCGCCCGGCCATCAATCCATTCTCACTTTGGGCGAGCCGCGACGGACCCTGGCAGACCTTGATGGTGTCTTGCTGGTGCGGCGCGAGATCTAGAATTTGCCGCTTTGTCTTGCCCTGTTCTTTGACAAGTGAATAGAGTCATATATTTAAAGGCAAGA # Right flank : CGCACTCGTCCTGCGTACGCCGCTGGCCGGGCGGCTGACGAATTTCGATCTCCAGCCCGGCCAGTCCCTCAAGGCGGGCGACAAGATCGGGCAGATCGACAGCGAGGGGCGCTACCGGCTCGACGCGGATATAGACGAGTTCTATCTCGGCCGCGTCGCCGTCGGCGAGCGGGCCGAGGCAGATATCGGCGACGTGAAACTCCCCCTGACCGTCTCCCGCGTGCATCCGCAGGTGACGAACGGCCAGTTTCGCGCGGAGTTGACCTTCGACACGCCGCCCCCCGCCAGATTGCGGCGCGGCGAGAGCGTGGATATCCGCATCACGCTGGGCGAGACGCAGACGGCGCTCGTGCTGCCCAACGGCGCATGGCTGGAGGCCGGCGGCGGGTCGTCGGCCTTCGTCATGGCCCCGAACGGACGGAGCGCGGACCGGGTGAGCATCGCCTCCGGGCGGCGCAATCCCGAGCAGGTGGAACTCACCGGCGGCCTGCGCGCGGGCG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACACGCGGGGATCGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //