Array 1 55511-55722 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHK010000027.1 Enterocloster sp. 210928-DFI.2.20 MHDDEDPC_27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================ ================== 55511 32 100.0 26 ................................ GGTCTAAGTAATACCACTGTCCGCCC 55569 32 96.9 28 ...............................C CGTCCAGATAATACCATCTGCCATTAAT CT [55574] 55631 32 84.4 28 G....................CT.A......C CGTTCATATAATACCATTTGCCGTTGAT 55691 32 81.2 0 ................AT....ATA...T... | ========== ====== ====== ====== ================================ ============================ ================== 4 32 90.6 28 AGCCTGCCAGCCGGTCTGCATGGCGCCGCTGG # Left flank : CGGACAAGCGCTTTCCCAAGGCCAGACGCGTCCCGCGCACCTTGATGATAACGCTTCCGCTGCCTTTCTTATTCAATATATTCACAGGCGTCCCCTCATTGACCCCCAGGGCCTCAAGACGTCTGGTAATGCTCTCATCCACCTGCACGCCCGATACAACATACCGGCCGCCGATCTCACACTCATTCAGCTTTTTCTGCATTGATGCCTGTCTCCTTTTGTAGTTACATTTAAACCATATTCATTGTATGCTTAATGCGAAAAAATGTCAATAAAAAGAGTTTGTTATGACAAACTCAATTCAAAAAAAGATACAGCGAATCTCTCCGCTGCATCTTTTCCTGCTTTTTCTCTATATTTCTTTATGTTTCCGTTCTGTATATTCGTATTATGATTTACTGCACCCAGGCTCCTGAACCATCCACATATTTTCCGTCCGGCGTCCATGTATTATAATACATGGCTCCATTGGTGCCCAGATAGTAATACTTGCCATTAAT # Right flank : GAAGGGTTCAGATAGTACCAGGTCCCATCCAGCTTCTGCCAGCCGGTAACAATATACCCCTTGTTATTGAAATAATACCATGCGCCGTTAATCTGTTTCCAACAGGAGGCCGGATATCCGCCGGTATCATACGCATACCATACACCAGTACCATCCTGCTCCCAATGTCCGCTTCCGCCATAGCGGCCAAGCTCATCCTCATCAATATACAGGGAGTTGGAATCCTCGGACCATTCACCTGTCTTATTATTGTAACGGGAAATAGCCCTTACACGGAAGGTATAGTCTCCCTCCCGGTTAAAATAACCTGCAAAATTATATGAGGTTCCTGTAGTGCTGACCGTAGTGACTGTCTTGTCGTCGCGGAGCAGCTTTACATCATAGCTCTTAGCGCCTTCAATCTCCTCCCACTCAGCCGTGGTATCATTCCATTCCAGCTCCGACGCACCCTGAAGCTTGCCGCCGATACGTTTTAACTCAGCATACACTTCAATGTACTG # Questionable array : NO Score: 3.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.53, 5:-1.5, 6:0.25, 7:-0.09, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCCTGCCAGCCGGTCTGCATGGCGCCGCTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTGCCAGCCGGTGAGCATGGCGCCGGAGG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.50,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 290504-291539 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHK010000002.1 Enterocloster sp. 210928-DFI.2.20 MHDDEDPC_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 290504 33 100.0 34 ................................. ATGATACTATTGCCCGGTATGTCCCGGATGATAA 290571 33 100.0 36 ................................. ACGAATGGAGCCGACACGGTCTCAAGCTCCCACGAG 290640 33 100.0 33 ................................. GCAAGTTGACCTTGAGACATGCCACTTTTTGCC 290706 33 100.0 34 ................................. TCTTCCGCACTGCAAAAATACTGGGCCTAAAACC 290773 33 100.0 34 ................................. CACCTCTGGGATGGTTAAAACCACCCCAGCAGGG 290840 33 100.0 33 ................................. CCCGTCATCCACATCTATCATGCCCCTTGACTG 290906 33 100.0 33 ................................. ATTATCTGTTACATTTGTGTCACTGGTTGAATC 290972 33 100.0 35 ................................. TTGACTTAATAGGGGCAAGTGAAGGTGGACGAGAA 291040 33 100.0 33 ................................. CTATGTATTTACGCATTACTGTATCAATCCTTG 291106 33 100.0 33 ................................. AGTAGTTGTCTAACTATGGCCTTAAACTTTTTC 291172 33 97.0 34 ..............A.................. ATTTGCACAGGCTGGGCAGGGTCCTCCCCTGTCC 291239 33 100.0 34 ................................. ATCAAATATCGGCGGTTAAAGTTTAAGTCTCCCA 291306 33 100.0 34 ................................. TGCATCTTACAAATAAAGAATTACCGGTTAAGCG 291373 33 100.0 34 ................................. AAGCTTTCATCAAAAATCACATTTATCGTTCCGG 291440 33 100.0 34 ................................. AATGAAATGATGTCGCTTGTATCAACGTCATATA 291507 33 78.8 0 .......T..............CA..CCA...G | ========== ====== ====== ====== ================================= ==================================== ================== 16 33 98.5 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : AAGTTCTGGAACTACCTGAAAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAGGCGGGAAAGCTGGCTGCTGTAATGGAACGTCAGGGCAGAGTACTGCGTATTTGCGATGCCGAAGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCCATATATCCGGAACAAAAGAGGCTTGTATTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCTTTGCAGCATGCAGGATATATGCGGGAAATGAAGGATTATGTAATATATAAGTAGAGTTGGTTTCTGTGAGTTGGGAGCCCTTCAAACCAGGTACGAATGCCAAGCTGACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGAGGAAAAGGCCGTGAAAGCGGGCTGGGTGAATGGACTGAATTGGTTGAACTGGGGAGAGAAGAGCATAATGCATAAAATGTTAGGGGGGATGTGGCGCAGGTTTGGATAATTTTGCT # Right flank : GATACCTGTAAGCCCCTAAATTAATGCAAAAGGAAAATTGCGCCCCGCGTACCTAATGCATTGAAAGCAGCCATAATTATATATTGAGAATTCGCAAAACATCAGTTAAAAGAACATATTAACAGTATCCCGGTCAACAGGGAATCCGTTAAGCACATCCCCCCCTCTGCAAATAACATCCGCCCCCAAAAACACCAACATAAACAAAGGAGTAACACATATATGATTGAAATAATCTATAGAGACAAACGCTTTCTTGTTAAGGGCAGCTTTTCCATAGGAATAGCAGGAAACTATGTAAATGAGGATTTTGGGGATGAGAATATCATGATTAACGATACGTTAGAGGAAATCATGAAAGAATTGCAGGATGAGGACTCCTTTTGGTACAAGCCGCTGTTTCCCTATCTTAAATCTGAGACAGCAGACAGTGGCGGAATAGCCAGAGGTCTTACCGCGTACTACAATCAAAAGGAAAAGGAAATCAGGGAGAATGAAAA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 21483-21825 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHK010000045.1 Enterocloster sp. 210928-DFI.2.20 MHDDEDPC_45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 21483 33 100.0 34 ................................. ATCTTTTCCACCACTTCTGTAGCTCTGCTTCTGA 21550 33 100.0 36 ................................. GCCCGTACCTCCCGGAGCTTCTCGCTTAGAGTTTCT 21619 33 100.0 33 ................................. ACCTGTTCTATCGGCATACCCCTGTTCAGCAAA 21685 33 100.0 33 ................................. CGAATGAGTAAACTCCTGGTTGTCAAGTACACG 21751 33 84.8 9 .........................C..TTCC. TTCTGGTCA Deletion [21793] 21793 32 75.8 0 ............A.-A...A..CAA.C...... | G [21823] ========== ====== ====== ====== ================================= ==================================== ================== 6 33 93.4 29 GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Left flank : TGCTGATACTGATTACATATGATGTGAATACGGAAACCGCTGCAGGCAGGACCAGGCTGAGAAAGATTGCAAAGCAATGCGTTAATTACGGCACCCGCGTCCAGAATTCTGTATTTGAATGTATTTTGGATAATACCCAGCTGATAAAGCTAAAAGCCATACTGACAGATATCATTGATGAGCAGACTGACAGCCTTAGATTTTACAACCTGGGAAATAAACACACTACAAAGGTGGACCATGTTGGGGTGAGTAAAGGGATTAAAGTGGAAGAGCCGCTGATATTCTGACCTGGCTGCGGGCGGTAAGGAGGTTTCAAATAGTTTGGTGCGAACCAGAAGCAAACATGAATTTACGGGGGGATTCGCACCGGAAAAACTGCACAGTGAAAACGGCTTTGGATGTGTGCAGGGTAGGTTGGCGGTGATTTGAGGGAGTATGATGTGATTTGATTGTGGAAATGTGATGAAGAATTGTTGGTTTTTTTGTGTAGTATTGCT # Right flank : TCCGCCAAATTCAGGATTACGTTTAGTCAAAACATCATTCCCCTTTTTCTAAGAAAACAGTATAGTTTGAATCATAAACATTAGCTATAACTAACAACACGCAACAAGAAAGGTGGGCGAACACCCACCTTTGCCATAAAACTGTTATAGGGTATAAAGAACGCGGGCCTCCCTCACCCTTTCCATGCCAGAATCTCTCTAAGCCCCGGCACCAGCACTTTGGCGCTGGTTTCCAGAATAATCCGTCCTTTTTCAGCCGTGGCGCCTGACGGGTCTCCGCCGATTCCTATGGGTTTGCCGTCTGCTGTTTTCCAGTCCTCGGACACCCAGCCAATGGATACGTTTCCATAAGGCCTCAGTGCCTGATTGTCTTTAAATGCAGTTGGAATTCCTGCCTCTGAGGTATCTAACTTTACCAGGGACGGGTCCACGGCCATGACCATGGAGGTTTCCATCTCGCCTCCATGGAAGTCCCAGATATTTCCCTCTGAAATGGTGGC # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.67, 5:0, 6:0.25, 7:-0.47, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.90,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //