Array 1 6236-7393 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FFCI01000023.1 Neisseria meningitidis strain 2842STDY5881447, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      6236	    36	  94.4	    30	........G...A.......................	GCGGAACGGGTTGACAGACTGAATTTGAGT	
      6302	    36	  97.2	    30	............A.......................	ATCACTTTTAAAGGCGGCATCGGCTGGTTT	
      6368	    36	 100.0	    30	....................................	AGGGGTCGTGAATGGAGTTCTTGCAGTTCG	
      6434	    36	 100.0	    30	....................................	TGCTACCAGCGACAACAGGCATTACGCCCA	
      6500	    36	 100.0	    30	....................................	TGAGAAAGATTTAAGAACTAAGTTCCCATC	
      6566	    36	 100.0	    30	....................................	TCAGCCTCAAATACATCCGCCAAATCGTTG	
      6632	    36	 100.0	    30	....................................	ACACAATCTCCGCCGTTCCAATCAAATGTG	
      6698	    36	 100.0	    30	....................................	CTGATGAAGATACAACCGCACTAACTTTAC	
      6764	    36	 100.0	    30	....................................	CTCTTCATTGAAGAAGTTATAAGCCTTTGT	
      6830	    36	 100.0	    30	....................................	TTTGGTAAAGGTTTCTGTTGCGACCCGAAT	
      6896	    36	 100.0	    30	....................................	GCCTGCGTACTTGGTACGCTGGTCGCCTCC	
      6962	    36	 100.0	    30	....................................	TTCATAGATCGATGCATGAGGTTTTCATGG	
      7028	    36	 100.0	    30	....................................	AGGTCAAAGTGTCAGGCAAATTTAAAGGTG	
      7094	    36	 100.0	    30	....................................	AAATCCATTTATCGCCCACCCTTTCCGGCC	
      7160	    36	 100.0	    30	....................................	TGCTGAAATTATGGCAAGTATGGGGCAAAG	
      7226	    36	 100.0	    30	....................................	TAGCAAACAAGGAATATTCAAAGTCCTTTA	
      7292	    36	 100.0	    30	....................................	CTTGGAAGCCGAACAGGCAGAAATCAACGC	
      7358	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        18	    36	  99.5	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   GGAAGCGGTCGATGTGTTTGGCAATCATGGCTTGTGCGGTTTGCTGGAAGAAGGTACTCATGAGAAATCCCCTAAATGTCTTAGTAGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG
# Right flank :  TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.40,-0.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.68   Confidence: HIGH] 

# Array family : NA
//