Array 1 3096-2404 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AGFU01000007.1 Sphingomonas elodea ATCC 31461 contig000007, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
      3095	    32	 100.0	    34	................................	CAGCTAGTGCCGTCCAGCACCGCCGAGAAATAGA 	
      3029	    32	 100.0	    35	................................	ACCGCGATCTACAAGCGGATTTACCGTGCGCTCAA	
      2962	    32	 100.0	    34	................................	TGATTGGTGCCGACGCGTTCAGCCAGCTCGCCCT 	
      2896	    32	 100.0	    34	................................	CTCTGCAACAGGCGCAGGCGTTTCCTCCGGTGCG 	
      2830	    32	 100.0	    33	................................	CTTGATTGCCACCTCTGCGGTAGCGCCGCGCTG  	
      2765	    32	 100.0	    33	................................	ACTCCAGACATGCGAGGCTTTATGGAACGCCTG  	
      2700	    32	 100.0	    34	................................	CCGACCGATCAGGTCGCCACCCTTCCCCCGCCGC 	
      2634	    32	 100.0	    35	................................	AACAATGCGGCGGGCGGCGGGAAGACTACGCACAA	
      2567	    32	 100.0	    34	................................	ACGGATGCGGACCAGCGGCGGCGATATCCAACAG 	
      2501	    32	  96.9	    34	.................A..............	CAGTAGAACAGGCTTTGCCCGCTGCGGATCGCCA 	
      2435	    32	 100.0	     0	................................	|                                  	
==========	======	======	======	================================	===================================	==================
        11	    32	  99.7	    34	GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC	                                   	       

# Left flank :   TATCCGCCTTTCCTGTGGAAATGACGCGATGCTGATGCTGGTCACCTATGATGTTAACACGCAGGACACGGCGGGCCGGCGGCGGCTAAGGCGCGTGGCAAAGGCGTGTCTCGACCTCGGGCAGCGCGTGCAGAATTCGGTGTTCGAGTGCGAGGTTGATCCGGCGCAATGGGCCTTGCTGCGCGCGGCGCTGATCAAGGAAATTGATGCGGAGAAGGATTCGCTGCGCTTTTACCGGCTCGGTGCCGATGGCAAGCGGCGGGTGGAGCATATCGGTGCCAAGCCCGTGCTGGATCTGGCGGGGCCGCTGCTTTTTTAGCCTTGCGCGAACCCAAATCTGTCCGATCCTGCACGGCAGGTTCGCGCGTTAATTGTTCTTTGCGACTCAAAGGGGTGGGGCGGACAGCGTCTGAACAGGTACCCATACGCGAGCAAACTGCGGGCAGTTCGCGCTACAGTACCGATTTACCGCTCTTTCTCATTGTATTAGCGCTATCGCG
# Right flank :  AGGTGGTCGGTTGCAATGACCGGCCGCGCGCTGGGGCCGACGCTATAGCAGTGTCGGTTACCGGGCGAACGATAGGCACCATCCGCTCAAGTGGATCGTGGCGTTTCAAAGGGTCGCGGCGAATTCCTCCATCGGAATGCCATCGGCATAGCGTGCGCCATCGGGGACGTGGAGCGAACCGACCAGTTTGATGCCCCACGCACGTTTGGCCGCCTCACGCCACAGCTTGTTGGCGCGCGCCATGCCGCGCGCCAACCGGCCACGCGGGGGGAGCGGCGAGGCTATCAAGCTGGCGCGCGGACCGATCGACCAGCGGTGCGTGTCGGTAAGCAGCTCGATCGGTGCCTCGTCGGAGGCTGCATAGAGCCGCACCTGCGGGTGCCAGTCGACCCAATGCGTCGCGCGCGTTGCGAGGGAAACGCCGATCGGCCCGCTGGCGATCGGCGTGTCGAATTCCACGTAGACGACGTCACGGCCGGTGTCTCCGACGACGTCCGCGA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.50,-11.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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