Array 1 890342-889764 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIEQ010000001.1 Actibacterium naphthalenivorans strain DSM 105040 Ga0373277_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 890341 29 100.0 32 ............................. AAATTCCGACCCATGAGGTATTCGCCCTGATC 890280 29 100.0 32 ............................. AAGGGTTACCTGATCGGCTCGAACAGTCAGAT 890219 29 100.0 32 ............................. CTGCAAGAGAGCGACACCACGACAAGCGGTGA 890158 29 100.0 32 ............................. TCGATATAGCCCGTCACGCCCGTTGCGGCATT 890097 29 100.0 32 ............................. CAGCTGGCTATACTGCGCGAGACGGATCCGGT 890036 29 100.0 32 ............................. CGCTCGCTGCGGCAGACAAGTTCGCAAAGCGG 889975 29 100.0 32 ............................. GTGACGTAGTTGCGGGTGTTTTTGCGGCGCTG 889914 29 100.0 32 ............................. CAAATCGAAGCCAAGGGTGCCGCCGACCCGGT 889853 29 100.0 32 ............................. GATTTCAACCCGCTGGATGACTGGTACGGCTT 889792 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 100.0 32 CCGTTCCCCGCCCACGCGGGGATCAACCG # Left flank : CGCGATGCGTTTCGCCGTTCGGGGCTTTTGTCGAAAATCATACCGCAGATCGAGATCGTTCTGGCGGCCGGTGACTTGCCCAAGCCCGTGCCCGCCCCCGACATGCTGGGTCCGGCGTTTGAGGACGAGGAGGACGGCGGCGATGATGGTCATCGTGGTTAGCCGCGCACCGCCGCGCCTGCGCGGGCGTCTTGCGGCCTGGCTGCTAGAGATCCGGGCAGGCGTGTTTGTTGGCGATTATTCGGCTCGGACGCGCGGGCGGATCTGGGATCAGGTTCTGGGCGGGCTGGAAGACGGCGATGCGGTTATGGTGTGGCGCGCCCCCAACGATCAGGGCTTCGACTTTGCCACTGCCGGCCAGAACCGGCGAATGCCCGAGGATTTCGACGGTTTGAAACTGGTGAAGTTCCTGCCGCGTTCAGGTTAATATTTCACCTGAAAGAATCGGTGCGCTCTTTGACAATTGAATAACCCAGTGATTCCAATCATCTTCGGGAAGA # Right flank : GTGCCCGACGCCTATGGCGGGATGTGCCTTTAGAGGCCTGTCACCATGCGGCTGCAGACGTCCATCGCAGGCGTCAGCCATGAAGGACGAGTGCGTCAGGCGGCGCCGAGGTCGCAAGCCCGGAGGTGGAGACGAGGGTGATCTTTGTGTCGGATGTCTGGGCGAAGGCCCGAACGAAGGCGCTCGAGCGGGAGAACCGCGAGCTGAAGCAGGCAAACGAGATCCTGCGCAAGGGTGAGACCATTTTACGGAACCTGGGCCATGCGCGGATCGTAATCGCTGCCCGGGCAGCCGACAACAACACGGAACGCCCGCACTCGTCCTTGGAATACCAGACCACAGCCGATTTCGCGCGGACCCTGACCATCGCAATCGCCCGCCTTGCTGCGCAAGGTGAAGCTCCGCGCGTCGGGCCATTGCTCAATCGGCGCCAATCGGAGTAAACGCCAGCCGCACTCCGGGCGCGGCTGAAGGAAAGTTCAGTGACAGATCACAAGTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCCCACGCGGGGATCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //