Array 1 49631-49173 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJZH01000013.1 Chimaeribacter coloradensis strain 2016-Iso4 NODE_13_length_128530_cov_43.5761_ID_5227, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 49630 29 100.0 32 ............................. CCTACCGGATATTGCATCTGCATCTGCATCAG 49569 29 100.0 32 ............................. TGGGCGACCGCCGCAGAGGGTGGGATAGCCAG 49508 29 100.0 32 ............................. CATTCGGTTGCTTCCTTGCCGGGTTGGTTGGA 49447 29 100.0 32 ............................. GCGACATTATCCGAAGGCCAATTGGTCACCTA 49386 29 100.0 32 ............................. CCGCGCGCCTGGGGGTTTCCTGGGATGCCGGT 49325 29 100.0 32 ............................. CCCCCTGACGCGTGGAACCTATTGGAGAGGGA 49264 29 93.1 32 .......................A....T GGGAAACCCTGAGGCCAGTGTAACGATCGAAC 49203 29 96.6 0 ..........................T.. | AG [49181] ========== ====== ====== ====== ============================= ================================ ================== 8 29 98.7 32 GTGTTCCCCGCGAGAGCGGGGATGAACCG # Left flank : AGCGTCCCGGCGGTGATCGCCGTGAGCCGCGAGCCGCTGATCGTCTACTCCGCGATGATGTTCGCCATCCTCGGCCTGCGCGCGCTCTACTTTGTGCTGGAAGCGCTGCGCCGCTACCTGTCACACCTGGAGAAAGCGGTGGTGGTGCTGCTGTTCTTTATCGCCTTCAAACTCGGCCTGAACGCCAGCGACCACCTCTGGCACCACGGTTACGAGATCGGCATCAACACCAGCCTCTACATCGTGCTGATTGTGCTGGGCCTCGGCATCCTCGCCAGCGTGCTGTTCCCGGCCAAAGAGAAGTAATTCTCCCGCCACTATGAAAAAACCCCGGCCCGCCGGGGTTTTTCTTTTTCAGGTTGGTGGAAAGGCGAAACAGTGCAGGCAGAGTTTTTAACTACTTGCAGGATCAATGACTTAAGTCGCATAAAAAGAGGGAAAAAATCGGTAGAATTTTTGCGCCTGAGAAAAGTCAGGGTAATCAATGAAATACGGTAAAA # Right flank : GCGTCGGTCAGATTTCGGTTTGGTCAGTTTAATTCAAAGCAAATGGCGAAATTCGTCTACCGTCCTGTTAGGAGAAATTTATGTTAAAAATAGAATAAATTGCATTAATTTTGTTTTATATCAATAAATCACTACATTTAATTTTAGCCCTGGGGTTTGGTCACTATTTTTATTGATTTCAAAAAAATAAGTGACTATTGTTTTTTTAACTTCAGATGGTTTTAATGAGAGTGAGGGTGTATGAAGGAAAAAAAATAAAGAAGAAAATGTTCCTGACGTTTTCGAATGCACGCATAAAGGAATTCTTAATCTGGGAGGGAAAGAAATATCATGTGCAGTATTAAGCAATGGTAAAAGAATAATTACTCAAACTGCTTTGTTTGATGTTTTCGGAAGGCCAAGAAAAGGGGAAAAAAGACTAGGTAAAGAATACCCTTCTATAATAGGTGCAAGAAATCTCCTTCCTTATGTTGATGAGGAGCTAATCGAATATTCTAAAC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGAGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 107024-106691 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJZH01000007.1 Chimaeribacter coloradensis strain 2016-Iso4 NODE_7_length_157739_cov_44.5066_ID_5215, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 107023 28 100.0 33 ............................ TACACAATAATAGCGCCCTTGCATGATTGGGGT 106962 28 100.0 33 ............................ CAGCTTTATTCCCGCGTGGGTTTTGCGCTCCCC 106901 28 100.0 33 ............................ CCGGGCGACGGGTCGTTTTTGGACAGATTTCGA 106840 28 100.0 33 ............................ CGCCCGGTTCGGGCAGATGGAACGGCATCAGCA 106779 28 100.0 33 ............................ TTTGTCTGATCGCCAGATCAGGAACCTGATGAA 106718 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 33 CTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : ATCAGAGGTAATGTTTTTTGGAGGACGCATACGATTTTTACGCCAGAAAACGTGGCTATAAATATTAGATTCAATAATCAGATGTTCTGTTAATAAGATCACACAACAATTTATCCGTTTGCCGTATGTATTTAATGAATCTATCCGTCGCATAAATAAAATGGAGTTCTCTTTTTCTGGATAACTCTCTCTGTTAATAGTTTTTATCTTGTTGTTTTTATTGTAATAAATATTAGTGAAACACTTCCAGTTAATCTGGAAAAGAGGGGGGTAATGTGGCGCAGGGAGAAGGCGAGCTGCTTTTTTTCTGGTGTGAAAACTACCATCTTCAGATAGGGGAAATGAATAGCCTTTTTTCAAATAAAGAAAGGTGAGGGGTATTTTCCTGTTTATTTTTAGTGAAGGTTAATTTTATGGGTTATTAATTTATAGATGGCGTGAATAAAGTGGGGAAACACAAGATGATGTATTTTTTTATAGATTCACTACATAATATTGGT # Right flank : CTCGCAGGGGTTGGCGGAGCTTAGCGGCTGGCCACTTCCTCACACCCAGGGATTTGCTCCAAAGGGAAGGCGGAGTTAACTAATCTGCCTCTCCCTCACTTTCGCAGGAAATTTATTCGATATTTCCTTTACTTTCTGCCTCTAACCGTAGACTTTTCATACGCCGTCTTTTTATCCGCATATTTAAAAACAATGTCCGGCGGGTAATTATCCCGCCCGTGATCTTTTTCGGGAAAAGTCTAAGCTGCCGGAAAAAATAATGGCCTACCTGCTGTTTCATTTATCGCCATACCAACATCTGCCTTGCTTTTTATCTTGCCGTAACGTTGTGCCATTCGCGCAGGAAAGCTCTGCCCGCGCGAAACATGGATCATTTTAAATTAATGATATTTAATGATTTATCTGGTTTTTGACAGGGCGTGGAATAACCTATTGATAAATAGGAAAATGCAGATTTTTAAGGAGAAAGTGTTTATTTAAAAAATTTTCGCACATTATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : CTCTTCCCCACGCACGTGGGGGTGTTTCT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 116699-115757 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJZH01000007.1 Chimaeribacter coloradensis strain 2016-Iso4 NODE_7_length_157739_cov_44.5066_ID_5215, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 116698 28 100.0 33 ............................ CTGGCGCAGGATACGTTCAAGGACGCGTGGGAA 116637 28 100.0 33 ............................ CACACCTCGGACAAGTCCTGATAGTTGACCATG 116576 28 100.0 33 ............................ TGTATGACAAAGTGCGCGAGGCGGCCGCCAAAG 116515 28 100.0 33 ............................ CCAGCGATTCACGACCTGTTGACCCGTCATGAG 116454 28 100.0 33 ............................ TTGTTGATAGATGCCTTGTATAGCGTCCACTCG 116393 28 100.0 33 ............................ CCTGCGCGCCGCTAATCTGTCCTGTGCAGATCT 116332 28 100.0 33 ............................ TTGTGTCCGCGTTCGTGGGCGTGCTCGCCGGGT 116271 28 100.0 33 ............................ TCAGGCGTTCCACTGTCCGTGCTGTCAAACGGG 116210 28 100.0 33 ............................ CCCAGATTGCTGACTGGACAGAAACTCAGGTCG 116149 28 100.0 33 ............................ CCGCTCTGGTGTGGGTTCTGTCACTCCAGCCAG 116088 28 100.0 33 ............................ TGCCTCGACCAGGGCGCGCAGCTCCTGCATTGA 116027 28 100.0 33 ............................ CAGGGAAAGTGCCGGCTGCAAAAGGCAGCGCCC 115966 28 100.0 33 ............................ TGCCTTATCGAATGCCAAGCCTAAAGCCTTGGA 115905 28 100.0 33 ............................ CTAGCTCTCCTTAGAGATTGCTGCGGCCCAGGT 115844 28 85.7 33 ..T...........T..A.......G.. CAAGGTGGCAGTAAGCACTAAAGGCAAGATGAT 115783 27 92.9 0 .............A.......-...... | ========== ====== ====== ====== ============================ ================================= ================== 16 28 98.7 33 CTCTTCCCCACGTGCGTGGGGGTGTTTC # Left flank : GGATTTGAACGAAGTCACCTGGGAGCAGCGGGTGATGGAGGGCAACCCGCGCTACCCGGCCAGCCAGGCGCTGCCGGACGTGCCCTACGCCCAGTTTGCCAACCTGCTGGGGTTGCGCGGGATCTTCGTGGATGAGCCGGACTCCTTACAGGCCGCCTGGGCCGAGGCGCTCAGCGCCGACCGCCCGGTGGTGCTGGAAGTGAAAACCGACCCGGAAATCGCGCCGTTCCCGCCGCACCTGACGCTGGAGCAGGTCAAAGGCTTCACCTCCGCGCTGGTCAAAGGCGACCGCGGGGCCGGGCAGGTGATCGCCGACACCGCCCGCCAGCTGATCAACGAAGTGCTGCCGCATAAAGAGAAGAAGTAAGGCGAGGTTAAGTGCCTGCCGCCACAGAGTGCCCCTTTATTTTATCTGGGTATCGGCGTATCTTCAGCAGCACCTGAACGCCGCTGACCACAACATATTGCGGTCAGCGGCAGTTTCACCATAGGATAGTGGT # Right flank : TCGGAAGGAAACGGCCTTCTAAGACGTCGGTCACTCTTCCCGCCTGCGTAGGAGGCCATTTATTCTGAGAGATAAAAAAAGAAACTGCCCCACAGTGTGGGGCAGGGATTAGGGGAGAAAAGACTCAAACACCAGTTGCAGGCCTGAGAGCTCCGTGTGCTCTTTTTTAGGTGTGCCGATCACCCGGATAACATAACCGGGCGGCACAAGAAGAGAGCGGAAAATGATGACGCCTGCATCTGCCGGGCAATGACGAATCAAATACTCCGTTACCTTTATCGCGACCGCGTCTTTTAAACCGGAAACAAAAACATGAGGTTTCGGTTCAACGAACCAAAGTTTCATGCGCCCGCGTACCGCCGGCGGCAGATCATTGGCGACGACGACCAGCACGTTTTCCCTCCATCAGTGTGGTTAAGTCCATTGCTACCTGTGCCAGCAGATCCAAACTAATCACCCGCTGGCGGAAGGCGGCGGAGACTTTATGTTTGTCGTAAAAC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCACGTGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //