Array 1 2782886-2780109 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083645.1 Corynebacterium freneyi strain FDAARGOS_1495 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2782885 29 100.0 32 ............................. AAGTCCGCGGTGGAGGCGGTCGCTGGGCTGAC 2782824 29 100.0 32 ............................. GGTAGCTCGGCGGGATGGATTCCGCGCGGCGG 2782763 29 100.0 32 ............................. CTGGGACCAGTCACCCCAGGGCAGCGGATTCG 2782702 29 100.0 32 ............................. CCGTTTATAAATACTGCTAGCAGCTCACCTAA 2782641 29 100.0 32 ............................. GTTCCTGGTCAAAACTCGCCGCCCACGGCGCT 2782580 29 100.0 32 ............................. ACCGTCTGCGCACGCTCCTTCGCACGCACCAG 2782519 29 100.0 32 ............................. TGGTTGATTATCGACCCGTTTGACGACGAGGG 2782458 29 100.0 32 ............................. CGGAGGAAGCATGACCCCCGACGAAGCCCGCG 2782397 29 100.0 32 ............................. GCCCAACGCGCCGCCGTGACCGCCTACGCCGA 2782336 29 100.0 32 ............................. AAGGTCATCCGCCGCTACGTCACCGAACAGGA 2782275 29 100.0 33 ............................. ATGAGGGAGGAGGAGCGCGCACAGCACGTCACC 2782213 29 100.0 32 ............................. GCCTTAGATCGGCGCACAGCGCATAACGGCAG 2782152 29 100.0 32 ............................. ACATATCCCGCAGCAAATCCTCCTGCCACGGA 2782091 29 100.0 33 ............................. TAGCCCGGAGGCCCGCGCCGCTGAAGGTGTCGA 2782029 29 100.0 33 ............................. AAGCACTGGAGGCCACCGAATGACCCTGCCCTA 2781967 29 100.0 32 ............................. ACTGCGACGCAGCACATCGTCGAGGATCTCGT 2781906 29 100.0 32 ............................. AGTTCCAAATGCACCACCAGAAGCAAGGTTGG 2781845 29 100.0 32 ............................. GATTAACTCCGCCTTCGATGTGCTGTCCGGCC 2781784 29 100.0 32 ............................. TGGTCTGCAAACCATCGGTGACCTGCCCGACG 2781723 29 100.0 32 ............................. AAGTCCGGGTGGTGGGAAGACACCCTCACCGG 2781662 29 100.0 32 ............................. CGGTGCGTCCAGGCCCACACCTCCCAGACCGG 2781601 29 100.0 32 ............................. GAGATACCGGTCGAGGTTCGCCAAGGTCAGTG 2781540 29 100.0 32 ............................. TGGTGTGGCCGAACTGGCCACCGCCGTTGTCG 2781479 29 100.0 32 ............................. TGATCCGACGGATGGCCCGTACCCCTACTGAC 2781418 29 100.0 32 ............................. GGGCACCAGCTCATTGGGGGTCTCCTTCGTGG 2781357 29 100.0 32 ............................. CCGAGCACCTTCCCTAGCTCACCGGGAGCAGT 2781296 29 100.0 32 ............................. GATGACCACCTGCCGAGCCCCCGGCTGCGACC 2781235 29 100.0 32 ............................. GGTGTCCAGCATCGCCGAATCCGAGGGGATGA 2781174 29 100.0 32 ............................. CTGCGAAGACTCCGAAATCCCAGGGTGTCCAC 2781113 29 100.0 32 ............................. CCCGGCCCCCTCCAATCCACCGTCCCCCAAGG 2781052 29 96.6 32 ........................G.... GGTACAGAAGACCTTGACCTTCCAGGTCAACG 2780991 29 100.0 32 ............................. GTGAATCACCCTGCGCATCACATCGACGTCGC 2780930 29 100.0 32 ............................. AGGAAGGGGCCAGCACAGTTGACTGATGAAAC 2780869 29 100.0 32 ............................. AGCCACATCTCCGTCGACGTCCTCTACGACGG 2780808 29 100.0 32 ............................. ATTCTGGAAGCCGCCGGGTACAAGGCGATCAT 2780747 29 100.0 32 ............................. ACCGTCTGCGCACGCTCCTTCGCACGCACCAA 2780686 29 100.0 32 ............................. GTGGCAATCCGTGACGACCTCCGCCCCGTCCT 2780625 29 100.0 32 ............................. CACACGTGCAGGTGTCCGGTGTCGGCGGTGAT 2780564 29 96.6 32 .......T..................... GTCGTCGAGCATGCACTCGGCGGGCGTCCACG 2780503 29 96.6 32 .........................C... CCGGCCGGCACGATCCCGCGCGGCGAGCGCTA 2780442 29 100.0 32 ............................. GCCCTGGCGCTGCACCTGGGTGGTGCGGCGGG 2780381 29 100.0 32 ............................. GGCGTCGGCGGGAATGGTCTGGTCAGTCATCG 2780320 29 100.0 32 ............................. TCTCAGGGCGCCGGCCCATCGCCATGAGGGGA 2780259 29 100.0 32 ............................. GTCTACGGCGTCTGGGCCGTCGGCAGCGTCGG 2780198 29 96.6 32 ..........G.................. AAGCTCGCCCGCGCCGCACTCGACGGCCTCAC 2780137 28 82.8 0 .....................-..GC.GG | C [2780118] ========== ====== ====== ====== ============================= ================================= ================== 46 29 99.3 32 CTCTTCTCCGCGCACGCGGAGGTATTTCC # Left flank : AGGTGCGCGCGCGAATTCACAGACAGCAGATGTTGAAGAACATGCTGGCTGTACTCATGGAGCTCCTTGAGCCGCACCTTCCCGACCGCGACGATGACCGTCTGGTTGCCGGCAGGGGTGATGAAGTTGCCGGACACACGCAGTACGGGAAGAGATAGGGGAGTGCGATGTTCGTGGTGATCGTGTCGACCAGCATCCCGGAGCATCTCCAGGGATACTTGACTCGCTTCCTCATGCAGATGGACACGGGCGTCTACGTGGGCAACGTGTCGCGTCGCGTCCGCGACAACCTGTGGCAGCGTTGCGTCGGGGCCTGCGGTGGAGGAACCTTGACGATGATCAACAATGATCCCAGCCGTGAGCAAGGATTCGCGGTAAATACGATGGGGCCGAACCGACGGGTTATCAAGGATTACGACGGTCTCCTTCTTCCGGAGTTCTTATCGGTTCGTACCGCCGAAAACGACGCAACCGTCTGTTAAAATGCCTGGTCGGGAAGT # Right flank : CGCGGCTGCCGGCGGGTGCGTTGCTTGACGACGGCCCGCCGCCCGGCTGAGTAGCCGGGAACCTGTTTGGAAGTGCACGCGAAAGCGGGCCAGGTGGAGGCACCCGGCCCGCTTTCTCATGCCTCGTCGTTTCGTCGCCCCTGCTTCTCCACCGTGAACGCCAACCGGTCCGGAATCAACGCCGTCGCATTCGAACGGACGGCCGTGGCTCCCCGGATTCATCCGTTTCACGTGCTACTTCTCGTGGTCGACCACGCGATGAAAGGATGTCCGGATGCTTGACATCATCATTTCCATTGTCACCGACCCCGGTTTCGCCAAGGGGTTCCTCGCCGGGGCGATCGAGCACGTCCGCGAGATCGTCGGCCCCTTGTCGTAGGCGGGTGCTTGACGGGTGGGGTCCGTCGTAAAGCGTCGCCGCATGGCACGGCCCAGCCGACCGTAATCGGCCGGGGTCGGCAGCGCCGACCGGGGCCGACCGCGGTTAAAACCCGATCTTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCGCACGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //