Array 1 33294-32154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNSK010000006.1 Lactobacillus delbrueckii subsp. bulgaricus strain CIRM BIA 1581 CIRM_BIA1581-i1-1_scf6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================================================================================ ================== 33293 36 100.0 30 .................................... ATCCGGCAGAACTAGTTGTTCCGCCGGGAG 33227 36 100.0 30 .................................... TATTAACACCGACACCGACGGCCCAAACCC 33161 36 100.0 30 .................................... CCTCTGCTTGTTTAAGCTTGCTTATCGTTG 33095 36 100.0 30 .................................... GGCGCCAGCAGAGCGTTATCGCGTTGCTCA 33029 36 100.0 30 .................................... ATTGCTTGGTTAAGCTAGCAGTTGCGTTAT 32963 36 100.0 30 .................................... CAATTAACTTTATTTCCTTTACGCTTTATA 32897 36 100.0 30 .................................... ATCCCTGCCTTAGTCTTGGGCGGCTGGATT 32831 36 100.0 30 .................................... CTCGGATCAGTGATCACATTGCTGTTTTTG 32765 36 100.0 30 .................................... AACTTTGAAATCAAATGACCAGCCTTCTTG 32699 36 100.0 30 .................................... CCATAGTTAAAATCTCCTCTTTAAATTAAG 32633 36 100.0 30 .................................... GCAAGGCGGCCGACTCACTAGCCAGTGCTG 32567 36 100.0 30 .................................... CAGCCCAGGCACGGGCTCTCTTGGCTTCTG 32501 36 100.0 30 .................................... CATTGTTACCACGCTTTCTATAAATCCTTC 32435 36 100.0 30 .................................... GATCTTGTCAGAGTGGTTGAGCATGTCGTC 32369 36 97.2 144 ...................................G CTGCTTGGATGCGTGGATTGAAATAGTTTTATAGGGGTGCTTATTCAATGTTGTCAATTTTCCCGATGTATGTTGGGGGTGGCCATCATAATGGCCTAATACTAAGACGACAATTCTACTCATTCCACGTAGGTGGGGGTGATC 32189 36 75.0 0 ..........A..........C...G..GAC..AAG | ========== ====== ====== ====== ==================================== ================================================================================================================================================ ================== 16 36 98.3 38 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTGGTCTACACTTTAACAAGACACTCACTCACGATCCATATGGTATAATCGAGACAGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGCTGTAGAACAGTTTAACGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATTATTTTTATCGAGTTTTGTAGCCATAAGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAAGACCTTGTTGATTGGTACTAGCCTTAAATTAAAGCTGTGTTAAAAAATAACG # Right flank : TGCTTTTCATGATTGAGAAGCACTTTTTTCTGTTGAACACAACAACTTAAAAAAACGTTAAATCAAACGCTTCACCAAGTAAGCAGGAAAAGATTATAGTAAAATACACTGGTTATAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTAAGGAGAATAAACACATGAAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTATCACAAGCAATTGGCTGACTTTTCTGCTATCGACCTGGGCCAAATCGCCCTGCGCGGTGCATTAAAAGAAGCCGGCCTTGACGCCGAAGACCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAGAACATGGCCCGGCAAATTGCATTAAACGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGCTCCAGCCTCAAGGCTGCCCGGCTGGCTGAAGCCCAAATGTTAATCGGTGACCTGGGC # Questionable array : NO Score: 5.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.68, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //