Array 1 106364-105976 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFIK01000015.1 Acinetobacter baumannii strain 4300STDY7045702, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 106363 28 100.0 32 ............................ TGATTGCGGTGATGAGACCATTTTGTATTCTC 106303 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106243 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106183 28 100.0 32 ............................ CTCCTCATCAAATAGGTCGGGCCAACTGGAAT 106123 28 100.0 32 ............................ TCCGCAAGCGTGGCTTCACTGTTAATTTTCGT 106063 28 100.0 32 ............................ AGTGGAAGAAGTCGGGCGAGATCATGATTTTG 106003 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCGTCATCGCCCAAATGATTTAGAAA # Left flank : GACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTCGCTGATCTAGTTAAAGATGCTTTTGTAATGCCAATTGCTTTTACATGTGCAGCAAAAGGATTAAATCAGAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGCAGTAAAATCAAATAAAATCATACATTTAATCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTAAACTTAACTTT # Right flank : TCTGAATCTTAAAAAAATCCAAAAAATTATAGTTCAGGACTTTTCATTAATCTTGGTGGGCTTGATATCTCCCCTAATAGCCCATTGTAGAATCGATCTCTCTAATTAGGAGCGTGGTAAATGTTTTGACTTAGTAGGCCCATGCAAAAACTGCCCTTTCCGCAATGATAAGCTCGAACAAAAAGGCTGGTTAGGCTCTGCCCGTGCTCAGGATATTTTCGACAATTTAAAAGATGGTGGCTTCTTCCCTTGTCATAAAACCAATGATTATGTCCGGGATGAGAAAGACTATAGCGAATATGACGATGAATGTGAAAACGAACCAAAGTTTAAGATTCAGGGTCAACATCAGTTCTGTGCCGGTGCTTTAATTCTTATGGAGAAAACAGGTGCCGCAGACAGATCTCAGGTTATCCAAATTGCGGAACGATTAAGATTGTACAAGAAGGATAAACTAAGAATTGCCACCTCCTCTGTTTTCAATTCAGAGCTTGAGTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAAATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 111452-114121 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFIK01000015.1 Acinetobacter baumannii strain 4300STDY7045702, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 111452 28 100.0 32 ............................ TTGTAATTGAGAGTAGCTAACAAAATCAGACT 111512 28 100.0 32 ............................ TTGTGCAAAACAGACAAACATTTGTAAGCGCA 111572 28 100.0 32 ............................ TGAGAAGATTAAACACAGCAATGTGATGATCG 111632 28 100.0 32 ............................ AATCTGTTGACCTTGAAAAACTGCAATATATT 111692 28 100.0 32 ............................ ATTGTGGTGTAGCAGGTTGGATTCGAACCAAC 111752 28 100.0 32 ............................ AATAGTAGATATATTGCTTAATGATACATCGC 111812 28 100.0 32 ............................ ATAACCTAAAGGCTCGAAGGGGCGGTCTGCAA 111872 28 100.0 32 ............................ AACCATCACGACACGGGCATTACCTGCTGCCC 111932 28 100.0 32 ............................ TCAGCTCCCCATTCGCTTTCACCCAACTTAAT 111992 28 100.0 32 ............................ TTATCCTTTTAAGATGCTTTGCGAAAAATACT 112052 28 100.0 32 ............................ GCATAGTTTTGCGCCCCGCACACAACAAAACC 112112 28 100.0 32 ............................ TCAAAATGAAGATGAACAGGCCAAGGCGATTG 112172 28 100.0 32 ............................ TGGATACTGTGATGAAACAAGAGAAGCCTACC 112232 28 100.0 32 ............................ TTGCAAATCTGGTACGACTCATTGGCAAAGTT 112292 28 100.0 32 ............................ AAGAAAAGAATTTCATGTTTGAAATGACGGCA 112352 28 100.0 32 ............................ AAGAATCGCACCTAGTGCCACATTAATTAAAT 112412 28 100.0 32 ............................ TAAGTATTTTGGAGAGTAGGCCAATGGGTTAG 112472 28 100.0 32 ............................ AGAGCAGTTTATTCGTGAGTTTGGGGTGGAGA 112532 28 100.0 32 ............................ TTTGATAAGAAGCAAAACTTTTAGTCTTTCCA 112592 28 100.0 32 ............................ TTCAAAATCACTTAAATGTTGCTCTGGAATGA 112652 28 100.0 33 ............................ AAATTGCGCCCATTTCAGCAAACATGTAACCCT 112713 28 100.0 32 ............................ CTCTTCAAAATACCACCCAACCCCGTGCGACT 112773 28 100.0 32 ............................ TTTCTGCATCCACACAACAAACATAAAGACTA 112833 28 100.0 32 ............................ TGATTGGTGTATTGAAGCAAGCGACTAGTTAA 112893 28 100.0 32 ............................ TGTAGTCTCAATCTTGAACCGCTGGCACACAC 112953 28 100.0 32 ............................ ATAGAAGAATCGGCAAGCGTATTCATAAACTC 113013 28 100.0 32 ............................ ATTATTGGTCAAAGATTGACTTAATATAATCA 113073 28 100.0 32 ............................ ATAGTAGTAATCGTTTTCAATGTGCTTGCGGA 113133 28 100.0 32 ............................ ATGAGTGAGTTTAAAGTCGGGGATAAGGTTGT 113193 28 100.0 32 ............................ TTAGCTCACATAATGAAAATTTGTCACTTTGA 113253 28 100.0 33 ............................ TTGGCCGTGAGTTCCCGACCGCGATTGGCGACA 113314 28 100.0 32 ............................ AACGTCGTTCGGTTACTTACATGAACGACCGC 113374 28 100.0 32 ............................ AGAAGCGCGTTAACATTCTTATGGAGGAGTTT 113434 28 100.0 32 ............................ CGCTGATTTAGATAAGAACGGGAATGTTCTTA 113494 28 100.0 32 ............................ ACACCGACACGCGTTTGAGCTAGCGTAACATC 113554 28 100.0 32 ............................ TTATATCGCTAAGATGCTTAACCAGCCACAAA 113614 28 100.0 32 ............................ TGCGCGAAATGGTGCGAAATGGCGGCATGTTT 113674 28 100.0 32 ............................ GGTTGTACAGGTCAATGGTGCAACGCCCGTTC 113734 28 100.0 32 ............................ ATTCAGTAGGGAAAGCTTCGCCGTATGGATTC 113794 28 100.0 32 ............................ AGACGCTACACGATCCTTATCTAAAGCCAATT 113854 28 100.0 32 ............................ TAGCGGAAAAAGTCTATGAGATCATGAAGGCC 113914 28 100.0 32 ............................ ATGAAGTGTTTAATTGGTACTGTGGCGAACCT 113974 28 100.0 32 ............................ CTTATGTCTCTCAATGGTGGTATTGATGATGT 114034 28 100.0 32 ............................ GAACCAAGATCAATCGTAGTGTTCGGGTTAAT 114094 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 45 28 99.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : CTTTAAAAATAGAGGCCGTTTTACCTGCATTTGCCTGATAATCAGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTAAGATAAGGTAAATCAAGTGCTTGTTGCTTACTTAATCGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGCACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGGAAAATGAAAGTATTGAAGGAGAGAGTTGCAACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTCAGAAGATTAGGTTATATTTTTTAAAAATGGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGTTTCTTCCAAAATTTAAGACGATGTATTTTGTCGTTAAAAGGTCGTATTAAACTGATTAAAGCTAGAGGTGGTCCCACTTGTTTGAACAACTAAAAGCGTATTTATAAGTGATATTCCGCTCTAGTTAAGCCACCTTGTTTTGTTGGGGTAGCTGATCATAGTAAAACTCATTTGGTGTCATTTTGTCTAGACTCGAATGAGGTCGTTTCAAATTATAAAACTCAAAATATGCACTTAATTGCTTTTTCGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //