Array 1 8784-9544 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MUNN01000128.1 Pseudomonas indica strain PIC105 Contig_000128, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      8784	    29	 100.0	    32	.............................	CGTGTATTTGAGATTTCCGCAGACGCAATTAT	
      8845	    29	 100.0	    32	.............................	ATAGCTAACAACATCCAATATTGAGGCTGCGT	
      8906	    29	 100.0	    32	.............................	TCCGTTCGCGCGTTCCTGCCTGGCAGCCCTGA	
      8967	    29	 100.0	    32	.............................	GTTGGCCTCCACCTGTTCCCGCAGACCGCTAA	
      9028	    29	 100.0	    32	.............................	TCGAATCACCACTTGAGGCGCGCATGCGTCAA	
      9089	    29	 100.0	    32	.............................	GGGGTGCGAAATGAGCAAGCGCTTTGGCCGCA	
      9150	    29	 100.0	    32	.............................	CGGTGCGTCGCGGCAGGGCGCACCGGCTCCGG	
      9211	    29	 100.0	    32	.............................	CATACGTGTGGTCCAGAGGAGGAACCACTGCG	
      9272	    29	  96.6	    32	........................G....	CACGTCGGTGAGCAGGACGGGGGTGTCGAGTG	
      9333	    29	 100.0	    32	.............................	GCAGGTCCGGCTCGATATCGAAGCGTTCGCAG	
      9394	    29	 100.0	    32	.............................	CATCACGGTAGATGGGGAAACGCGCGAGTGGC	
      9455	    29	  89.7	    32	...........A.............C..A	TGGGGAATCATCGATATCGGTCATGGCACCCT	
      9516	    29	  79.3	     0	...........A.A.T........GC..C	|                               	
==========	======	======	======	=============================	================================	==================
        13	    29	  97.4	    32	GTGTTCCCCGCGGGTGCGGGGATGAACCG	                                	       

# Left flank :   TGTTGGCGCGCATCATTCCCACCATCGAGGAGGTGCTGGCCGCGGGCGGTATCTCTCCCCCGGAGGCTCCGCCCGAATCCGTACCTCCGGCCATTCCCAATCCTGAAAGCATCGGCGACGCCGGCCATAGGACCCAGTGATGAGCTTCGTCGTGGTCGTGACGGAAAACGTGCCGCCGCGTCTGCGTGGCCGCATGGCTATCTGGCTGCTTGAAGTACGGGCGGGTGTGTACATCGGCGATGTTTCCAAGCGCACGCGGGAAATGCTTTGGGAACAACTGAAAGAAGGCTATGAGGACGGCAGCGTCGTCATGGCCTGGGCGAGTCAGCACGAGTCCGGCTACGAGTTCCAGACTCTCGGCCCCAACTGCCGCTTGCCCGTGGAGTTCGATGGTTTGCACTTGGTGGCATTCCATCCTGTCGAGTAACCTCCCAGGCCATTTTTTCGGTAGTTTTTTCTGGCGTCTTTTTCTCCTTGTAGAGCAATGAGTTACTGGAAGT
# Right flank :  CTGGCTGACGTGGCGAGTCGGTCGAGTCGGGGAAGACTTACATTAGATTTGCCCCCCATGCCGATTTCGCCCTTAAGGTGGCGCCATGAATACCGATCCACTACTCGAACACCTGCGAAAACGGCTGCCCGATCTGCTGGCGGTCTATCTGTTCGGCAGTCACGCCACTGGGACGGCGGCGGGCAGTGATGTCGATCTGGCAGTGCTGGTGCCCGGCCAGGTCGAGCCGCTGCGTTTGTTCGAGATCGCCGGCGAGTTGGCCTCTCGGCGTACCCCAGAGTGCGCGGGATGTCTTCGAGTTGCTGGCCAGAGGGGGATGGATCGAGGCGTCCCTGGCGGCGGGCCTGAAGAACATGGTGGGCTTCCGGAACATTGCAGTGCATGAGTACCAGACGCTGCAACTGCCGATCACGGTTGCCATCATCACCCAGCACCTGGATGAGTTTCTTGTGTTCAGCTCGACGATCCTGCGCCGCGATGCGGGGAGTCCTGGCGATTGA

# Questionable array : NO	 Score: 6.13
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGGGTGCGGGGATGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGTGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [61.7-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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