Array 1 90938-88104 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJCR01000004.1 Legionella pneumophila strain 2531STDY5467357, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 90937 37 100.0 35 ..................................... AAGAAAATCAATAAATCCAAACAACCAACGAATGT 90865 37 100.0 36 ..................................... CTTCATTGCAGGGTACAGTTGAAAATTCCCTTACAG 90792 37 100.0 34 ..................................... TAAATGAATTTTCAATGATTTTAGCGGCTTCGAT 90721 37 100.0 33 ..................................... CCGGATAAAATCGGCAAGGCTTGTGGGTGACGA 90651 37 100.0 35 ..................................... CTTTGAAAAGGCTCATACCTTGTTACCCCTTGCAT 90579 37 100.0 33 ..................................... AGAGTGATCACTCTTGAAGATGCTCTTGGTTGG 90509 37 100.0 30 ..................................... TGATAATTTAAGAACATATAATAATTCTTT 90442 37 100.0 33 ..................................... ATGAATAAAAATGTCTCTAACATGTCAATTCTC 90372 37 100.0 35 ..................................... TACAATTAAAGTATATGAAGCATTCAAAGATTTCT 90300 37 100.0 36 ..................................... ACTTTCACTGTAACAAGAAACGCCGACGGCAGAGGC 90227 37 100.0 35 ..................................... TTATATTCTCCACGTTCATTATTTGTACAATATGA 90155 37 100.0 35 ..................................... TTCCATTCGGCGGCACGTTCGCTGGTTGGATCAAC 90083 37 100.0 35 ..................................... AATATAACACCAATGATTCCGGTATAAATCACTAA 90011 37 100.0 36 ..................................... GTCTCTCCAGAAGAACAGGCCAAGCGAAATGAAGAT 89938 37 100.0 34 ..................................... TTTAATGTTCTTTGTGCAGTCATTGATTCAGGTA 89867 37 100.0 35 ..................................... TTATCGTCTATAACTACTAGACCGTCATCAGTAAC 89795 37 100.0 34 ..................................... ATAATACGGTTTTGTAAGCCGTCTAATTCACGTG 89724 37 100.0 35 ..................................... TCTATTAACAGCCCATTAACTGATCGACAAGGACG 89652 37 100.0 33 ..................................... ATTGCAAGCGGGTTTGATCGTGTTATTATAAGA 89582 37 100.0 34 ..................................... TTTATTTAGTCGTTTAGAAACCATGCGCCTCAAT 89511 37 100.0 35 ..................................... GTACTGGCCGACCAGACTACGGTACTTCCTGATCC 89439 37 100.0 35 ..................................... AAAACTTTCATTTGTTAAATTACGCATTTCATTTA 89367 37 100.0 34 ..................................... ATAGTTAGAAGATTTACTCTAGGAGTTTATTGGC 89296 37 100.0 35 ..................................... TGTAGCGAAGGCGAGGTTCCATAATGTATAAATTT 89224 37 100.0 34 ..................................... GTGCATGGTTTGCGCTTTGCAACCCTTCCGCTGA 89153 37 100.0 35 ..................................... TTGTGGTTATGCTTGTTCCTGTACGTGCTGTTACT 89081 37 100.0 35 ..................................... TCATAACTCTATTCAAATTGCCAAAGTAAGCAATC 89009 37 100.0 37 ..................................... TCAGTACAGCAGCTTTAATCTCTGCAATCGCCTTAGA 88935 37 100.0 35 ..................................... CTCTAGCCCGTCATATTCTTCAACTACCCAATCTA 88863 37 100.0 36 ..................................... TTTTGAATGTCTGTTTCAGTGTCGAAACTTAGTAAT 88790 37 100.0 35 ..................................... GCATCTTCTGAATTAGCCACGTCTTCAAGACTGTT 88718 37 100.0 35 ..................................... TCTAACTAGTTGAGGCGCTCTAGCTTTTATTTCAG 88646 37 100.0 35 ..................................... AACAGAAAACATGCACAGAAGAAACTGGAAAGCAG 88574 37 100.0 34 ..................................... TCCTATACCTTGTCACAATTTCCTCATATGGCTC 88503 37 100.0 35 ..................................... ACACCTACACCGTACTGAGCACCATAGTGTTCAAC 88431 37 100.0 35 ..................................... CTTCCTGAATTAAACTTATTGTGTTAACTTTTTCA 88359 37 100.0 34 ..................................... TTGCTGATGCTTCTCTAGCTGCTGATTCTTGTAT 88288 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 88215 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 88140 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 40 37 99.7 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //