Array 1 208928-211078 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZOD010000003.1 Citrobacter portucalensis strain LHC3 NODE_3_length_447051_cov_215.699222, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================ ================== 208928 29 100.0 32 ............................. CGCACCTTTAGCATACTCATTACGCAACACCT 208989 29 100.0 32 ............................. GAACGATGTAACCGATATCGCCGATGACGTGT 209050 29 100.0 32 ............................. CGACTTACATTCGCTGAAATATGCGCCGCAAT 209111 29 100.0 32 ............................. CCGCGTTTACGCCGCGCTGGAGCGCCTGGGAC 209172 29 100.0 32 ............................. ACTGGCAATTCATCACCGGTGCCGATTTCGCC 209233 29 100.0 32 ............................. TTTTACGCCGAGCGAACGCTGAGGTTTACTCG 209294 29 100.0 32 ............................. GTGGATACCCATCACGCGGGTGAGGGAAGAAG 209355 29 100.0 32 ............................. AATATGATAACGGTTCTCATGTTCTTACCGCT 209416 29 100.0 32 ............................. ATCACGGACGTGATCGCCCTGTTTTTAATATG 209477 29 100.0 32 ............................. CCAACATCTGTTAGGCACTGCTGCTGATATTG 209538 29 100.0 32 ............................. GGGGAGTGATGGAAACGCTCATGATCATTCAG 209599 29 100.0 32 ............................. CGCTCCTCGGCATCTTCCAGCGCCTGCCCGGT 209660 29 100.0 32 ............................. TGGATGGGCTGGAGTCCGGCCTATGCGAAGAA 209721 29 100.0 32 ............................. ATTTTACGTCCGCGATGCAGGGGCTGGAAAAC 209782 29 100.0 32 ............................. CGCAGGAGTCAGCTGTTAACGCTCTGGGGAGA 209843 29 100.0 32 ............................. GCGCTCAGCGTTGTAGGGGTAGCGTTACCAGA 209904 29 100.0 80 ............................. TTAGGGAGAGAACTAGGGTACTCACAGACTAGGTGTTCCGATAAACCGTTTTATGCGGCCGTTTAAACAGGCTTCATGGC 210013 29 100.0 32 ............................. CGCGCCAACCAGGACAGTTTCTGGCGCTCAAA 210074 29 100.0 32 ............................. TAATCGCAGACGTCGAGATCAACGGCAAGCAG 210135 29 96.6 32 .....G....................... GGCATGGCTTCATTTTTACTGCTTAGTTAATT 210196 29 100.0 32 ............................. CACAGAGAGGGATATAACTATTTCGCGCTACA 210257 29 100.0 32 ............................. CAACGCGCAGATGTTCGAAATCGACACATCAG 210318 29 100.0 32 ............................. CATCGTACTGATGTTTTTATTGATGTTGCGCG 210379 29 100.0 32 ............................. GCTATCCGCACTGCACCCGAGAGCTGAAAGAA 210440 29 100.0 32 ............................. TTACCTCCGAGGGCTTTCACTATATCGGTGGC 210501 29 100.0 32 ............................. AGACGGAGCGCCTGATAGAGCAGTCAATGTCA 210562 29 100.0 32 ............................. AAACACCCGGACACGCTCGACACTGTTGTGAA 210623 29 100.0 32 ............................. CGCGGCTGCTTCTTCCAGATCATCACTTGAAA 210684 29 100.0 32 ............................. CCCGCCCACATAGGGAGGCGGTAACAGCTCAA 210745 29 100.0 32 ............................. CGTCCGTGAATATTTACGGGCGCATATTCGAA 210806 29 100.0 32 ............................. CGGGTGAAAATAAACCGCGTGCTGGAGGCGAT 210867 29 100.0 32 ............................. CCAGTGCGGCCAGTAGAATTGGGTTGCGTGGT 210928 29 100.0 32 ............................. GATACGCCTGAATTCGACGTTATCTCGCCTAC 210989 29 96.6 32 ...........A................. AATTTATCCGGGACTACAACATATCTCTTTAT 211050 29 89.7 0 ..........................GTC | ========== ====== ====== ====== ============================= ================================================================================ ================== 35 29 99.5 33 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATCGAAGATGTTCTCGCAGCAGGTGAAATCCAACCGCCGTTACCTCCTGAAGATTCACAGCCCATCGCAATCCCACTTCCTGTTTCTGTGGGGGATTCTGGCCATCGGATTAACTAACGATGAGTGTGCTAGTTGTTGTTACAGAAAACGTACCACCTCGCTTGCGAGGCCGACTTGCCGTCTGGTTGCTGGAAATTCGAGCTGGTGTATACGTTGGTAATGTTTCAACGAAGATCCGCGAGATGATATGGCAACAGGTCTCCGTTCTGGCAGAAGAAGGGAACGTTGTCATGGCGTGGGCAACGAATACGGAGTCGGGCTTTGAATTTCAGACGTGGGGTGAAAACCGACGTATTCCGGTGGATCTCGATGGATTACGATTAGTGTCGTTTCTGCCTGTTTTAAATCAATGAGTTAGCGATCTTTAAAAATACGGAAAAGTTGGTGGATTTCTTGTATGCCAAAAAAGGCTTAAAATTCAGTTGGGTAGTTTTAGA # Right flank : CATTTTAGCGTTACGTATTGAGCCGATGATGTCGTATTCCCTACTGGCATAGAGACGAAAATGATAGCCCAACGTCTTCATCTAAAAAGGTGCTAAGAGTTTTTACCCGCTTTTGCCAGTTCTTTTACCAGCGGCAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCGGCCCGGTAACGCTTTATCGATATGCTGTTGGTTATCCAGTCGTACGTCGTGCCAGCTGTTGCCTGCCGGGAAAGAGGCGCTTTTGGCGCGCTGCTGATAGCCATCTTTCTTGCCCAGGTTCCAGTTGGTCGCTTCAACTGAAAGAACGGCAATCCCCGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTGCCTTTCGGATAGTCTTTGTTCAGACCTGGATTGGTGCTGGCAACGATACCGCGGCTGTGCGCGATAGCCAGTGCCCGGTCGCGCGTCAGTTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAA # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //