Array 1 45420-45980 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QXVO01000004.1 Staphylococcus hyicus strain SNUC 5959 contig004, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     45420	    36	 100.0	    29	....................................	AAAAGTAAAACAAATGCATAAAAAGCAAT 	
     45485	    36	 100.0	    30	....................................	AAGGTTACTGCCATTGCAGTTTTTGGATTC	
     45551	    36	 100.0	    30	....................................	GTTGGATAATCCGCTCTGGTTAGGTTGTTC	
     45617	    36	 100.0	    30	....................................	TATGCTTCAAACGCAAAAGGTGTTGTAAGT	
     45683	    36	 100.0	    29	....................................	CATAAGGTGTATTAATTCTTTTATATCTA 	
     45748	    36	 100.0	    29	....................................	TTTGGTAGCCATTTACTTCACAAGAGAGG 	
     45813	    36	  97.2	    30	..............A.....................	GAATATGTAGGTTCTAATATACTGTCACCT	
     45879	    36	 100.0	    30	....................................	ATATGTAGGAGGACTAAACATGGTAAAGAT	
     45945	    36	  88.9	     0	...................A...T....G......A	|                             	
==========	======	======	======	====================================	==============================	==================
         9	    36	  98.5	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC	                              	       

# Left flank :   GGCGTTCACGATGTACAATAACGCCATCTTCATTTTCTTTTTCATTATTTTCAGTGTGAGCTGCAGCTATAGTTAAAATGTTGTTATCAAAATCAACGTGAATGTCTGTTTTTGCCATACCTGGAAGTTCAGCGCTGACAACATATGCATCTTCACGTTCAGAAATATCTGTTTTAAAAGCTTGAGATAGCATTAAACCTTGCTCAAAATCTTTGAAAAGATCACTCGGGTTCATATCAAAAATAGAATGATTAAATGGTTTTAATTGGAATGCCATAAAGCATCGCTCCTTCATATTTTAGAATGTCGCAAATATCAAGAAACTGAACTGGTAAAGGTCACATCTGATCCTTTACAATCTTATTATACGGCAAAGGTCAAAGTTAGTCAAGGTTAAAGTGATATGATTGATGTAAATTGAAATTTATCCAAAATACATAAAGATCAGTGATATCAATGGATTAGACAATCTTAAAAGTTATAGTATACTGTAGCTAGAG
# Right flank :  AAAAGAATAGAATTGGCGTTGTGCGCAGATAGCTTAGTACTTTGTGATTTTAGGTATTTTTATAAGTGTGCTATACATGAAATATGTATGCGATCCACTTATTTTAGGGGTAACCTCATAAAATTGTTTAACTCAAAGAAACTAACGTTGTTTAGATAGAAGTTATAACACTCACTCCACAAAAATATCAGAAAATTCTTGACTCAAATGGATCTTATGATAAAATAAATTTACAAGTACTTATTTGTGCTTATACCTAAAATTACAGAATCTACTAAAACAAGACTATATGTCGTGTTTATCCCACTAATTTATTAGTGGGAATTTTTTTGTTCTTCTTTTATAATAGAATTTAAAAGGGAGGGCAATGTATAAATGAATAATTATATACTAGGACTCGATATAGGTATTACCTCAGTTGGATACGGTATTGTAGATAGCGATACGCGTGAAATTAAAGATGCTGGGGTACGTTTATTTCCAGAAGCGAATGTAGACAA

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.60,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//