Array 1 18496-20799 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUT01000010.1 Thermococcus sp. 21S7 NODE_10_length_40105_cov_26.281815, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 18496 30 100.0 36 .............................. AAGAGCAGTTCGAGCGCTTTGACAGGATATTCAAGA 18562 30 100.0 36 .............................. TTTTTGAACATGTTCACTATTTTCAACAGGACGTAA 18628 30 100.0 37 .............................. TTTGTTTGGTGTAATCTTAGGAACTCCTATAAAGTAT 18695 30 100.0 38 .............................. ATGAGGTGGTAAACAATCCTGTTTAACGTGTAGGTCTT 18763 30 100.0 37 .............................. ACTGGCTTGTGAAACTGCTTATAGTCGTGGTGATAGG 18830 30 100.0 36 .............................. TGGTTGATTGGGGAGCTCAAAGGGCCAAACTGAAGA 18896 30 100.0 37 .............................. CAGCTCGGTGACGAGCGGATGGGTCACGGTCATTTTG 18963 30 100.0 37 .............................. CAGAACAGCGTCACGTCTGAAAACGTTGAGTCCTCTG 19030 30 100.0 37 .............................. GGAGCCTACACCTTGAGGATTGAGGCCATCGCACAGA 19097 30 100.0 37 .............................. GCATGCGAGCGAGGACGCTTATATCAAGGTCTGTCGG 19164 30 100.0 37 .............................. GAAGAAATCAACCCTGCTGCCAGGATGCATCTTCCAG 19231 30 100.0 36 .............................. TCTTTATCGGCTTGGGAGTAATCACAATGCTATTAC 19297 30 100.0 36 .............................. TGAACAGCGCCGGGCCGGCAAGGCTTATCAGCTCGT 19363 30 100.0 37 .............................. CATACGTGGCCGGGCTGTCGTGGAGCACGAGCTCAAA 19430 30 100.0 37 .............................. CATACGTGGCCGGGCTGTCGTGGAGCACGAGCTCAAA 19497 30 100.0 38 .............................. TTGGGATTTACTACGTCGTCAAAATGGAGTCGCTCAAG 19565 30 100.0 38 .............................. CAAGTTCATTGTCTGGAAAGAGAAGGGCACACTGTACA 19633 30 100.0 35 .............................. AACTCCTCCTTTGCCTCGGCCACCTGCTCGGGGAG 19698 30 100.0 38 .............................. TCTTCGCCCAATTGTCGGCGACGGAGAAGTCAATCCAC 19766 30 100.0 37 .............................. TTCGACTAAAATTCCATCCTTCAGTGTAGATAGAATA 19833 30 100.0 37 .............................. GGGAAAGGGGCAGGCTGCCAACCTCGACCCTTTCCCC 19900 30 100.0 36 .............................. GTTGTAGCGCCGGTTGGGGCAGGACAACTAACGCGT 19966 30 100.0 37 .............................. TGTAAACTGTAGTAGAAATATCTATGTTGCTGTTGGC 20033 30 100.0 37 .............................. ATCAGAATATGGGAGGATAAAAGGTCTGAGACCCTCA 20100 30 100.0 37 .............................. CAAAGTCCCGCATCGGGTGGTACTTTATCGCAGGTGT 20167 30 100.0 37 .............................. CTCACTTGCCGATTTGGTCGCTCTTCTCAAGTACCGG 20234 30 100.0 37 .............................. CCAGAGTTATTTTCAATTTATTATACGACCTTAGACT 20301 30 100.0 36 .............................. TTACATCATCAGCATACTGCCAGACCCAATCAACAA 20367 30 100.0 37 .............................. GAAGAGATATTGCGCGGTAAGGCGGCTAAAGAATATT 20434 30 100.0 36 .............................. GCTTCAGCTCGACAACAATCAGAAAATCATAGACGA 20500 30 100.0 37 .............................. TAGTCCTGCATCTGAAATCGAGATTGTCTTAGTGTCA 20567 30 100.0 37 .............................. CTACATTTACAAAACACTCACAACCACTCTTACCAAT 20634 30 100.0 39 .............................. AAGCGATTTTTCGCGCGCGTAATATATATGCTGAAGCTG 20703 30 100.0 37 .............................. GGTCAGTGATGATGACAGCGACAGCAGCTGACAGGAG 20770 30 93.3 0 ............A.............G... | ========== ====== ====== ====== ============================== ======================================= ================== 35 30 99.8 37 GTTGCAATAAGACTTTAGGAGAATTGAAAG # Left flank : TTGAATACAACCCAAGGATAAGGTACTGATTCGTTTTCATCATGCTGATCCTTCCCCTTTTCAAGTCTTCGGCCCGGTTGTGGAGCTTTGTCCGGAACAAGCCATCATACGTGTCCAGGAATCCCCTTTTTGTGGTTCCAGAGATGTAACATTTGGTGACGCCCAAATTTTAAGACATAACGAATTTTCTTCGGATTGCGGGATAAAGACATTAGAATGCAGGATGGGATCGTTTCCCCGCAGAAATCGGTTTTTCTTGAAATCCCGGACATTCAAGTGAACCTCGGCGGATTTAAAGGGTTGCATGAGGGCAGAAATTCCACGAACATATGATGCCCCCAGCAACAGGACGCCCGTGATGCGTTTATTCCTGCGTTCACCCCTACCGCTGCCGCCTCTTTATGGGGATGTGAAGGACCCAATTAGAGGTTTCTGCAAAAAGGTTTTATAGACGGGCACTCATTAAACTCCATTGGGGAAACGGAGCAAAAGACCGCCCT # Right flank : GTCCAGTAGCCGGTTTTTTGAAAATGAAGTGGTATTGTTGCAATAAGACCCCCTCAGAATCAAGAAACAAAATCAAAAGGGATTCACTCCATCAGGCCGCCAGGAGGTGGCCGATGATGTCGCCGTTCTCGTAGACGTTGTACAGGTTCGCGACGATTATCATGACGCCGTTGTCGTATATCCGGCTGATCCACGGCCATACCTTTTTGTTCGGATTGGGATAGAGCTTCCTGACCAAGAGGGCAAACCGGAGAACAACCAGCGCAAATATCGAGGTTCTGAGCTGGTATCGCTGTTGTGCAATATGGAGTTGACGAAATCGAGGAACACGACGAATATCACCAGAGCCAGGGCGACATCTTCCTACAACTGAGCTTTCTCTTTTCGTAGAACTCCACCATATGTTCCACTTCGATCAACTACGGGGTTCGAGGATAAAAACCTATTGCCCGAAGATCGAGAAAAATGAGTATGAAAAGGGAACTCAGAAGAGCCACTGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAAGACTTTAGGAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 78992-77169 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUT01000001.1 Thermococcus sp. 21S7 NODE_1_length_598081_cov_30.097835, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 78991 30 100.0 37 .............................. GAAATTTCCCCATAGGGGAAAAATGCGGGAAAAATCG 78924 30 100.0 37 .............................. TCGAAGATTTGATTAGTGAAGCTCCCACCAAGGAGAC 78857 30 100.0 35 .............................. AGAAGTTCTCCTCCGCCTGGCCACACAAATCACCT 78792 30 100.0 36 .............................. GATGTTTCCGAGCTGGAATTTAATAATGGAGATAGA 78726 30 100.0 36 .............................. GCGGGAGCACTACGATTTATCTGTACTTTGGGAACT 78660 30 100.0 36 .............................. ATAAGAACGGATTTCGATGTCAAAGTAAGAACGGCT 78594 30 100.0 37 .............................. GGCCTCGACGAAGCCCCTTATCTGTTTCTTGTAGGTC 78527 30 100.0 38 .............................. TTGGACGAAATCTTGGAGATGTGGGACAGAGTATTGGT 78459 30 100.0 36 .............................. TCAGCAGGCTTGAATAGCCCCACTCTTTTACTCTCT 78393 30 100.0 37 .............................. CCGCGAAGCTAAACGTCGTCTACAAGGTCGATCCGAC 78326 30 100.0 37 .............................. TTGTTTGGATAGACCCTCCAGCCCAATTCCGTTTCGA 78259 30 100.0 35 .............................. ACGGGCGCGAAGGGAAACGTTTTTAAATAAATAAT 78194 30 100.0 36 .............................. ACTTTTCTGCATATTCTTTTGCTTCTTCAAAAGTGT 78128 30 100.0 36 .............................. ACGAGAGAGGAGGGGTGATGCAAAGGTGAATGGAAG 78062 30 100.0 37 .............................. TTAATCTCCTCCACCTTTTCAGGTGGGTATTTTCCTT 77995 30 100.0 36 .............................. ACGAGGTAGAAGTAGAGTTCGACCCGAGCGTCGTTC 77929 30 96.7 35 .................A............ TACTTGTACGCAGTGTTTCCGCCGAGGAAGTAAAT 77864 30 100.0 37 .............................. CGATTGTTCGGGTCCCAGGAACCTACAACCACAAGTA 77797 30 100.0 35 .............................. GTATCCTACCGCTACCCACACGGTCGCCATCTTCA 77732 30 100.0 36 .............................. AAAAGTCAATCGGGTGGTTATTGTAGGTGGAGTCTC 77666 30 100.0 36 .............................. TCTTCCCTCTCAGCTCCGGCCTGCCGAGGTATGCAC 77600 30 100.0 37 .............................. ACGCACCACCAAAAGTTCCACCACCACCTTCTATCCA 77533 30 100.0 36 .............................. ATGTAGGAGGCAAATCTGCCATTGGCCTTGGAGAAG 77467 30 100.0 37 .............................. CGTCCTGTGTTCGAGCTCGTCGCTGTAGTACATCTTA 77400 30 100.0 37 .............................. TTTTGACAACCTCGATATTTTGCACTACCCAAATTGG 77333 30 100.0 37 .............................. GGTAGTGATAGCTCTGTTCTTGCTGGCGACAGCAGGG 77266 30 100.0 38 .............................. CGGCTCGTTGTGGGGCTCTGGGGGTCTGCCTTCCTTGA 77198 30 93.3 0 ........................C....A | ========== ====== ====== ====== ============================== ====================================== ================== 28 30 99.6 36 GTTCCAATAAGACTTTAGGAGAATTGAAAG # Left flank : CTGAGGGAGCTCGGATTTGAGGTTATATGATGGCTATCACGCTCTCCCTCGCCCGGTTTTCGATTCCGCTCTCCGACCCGGTTTTTTGTTTAAACATGCATCAATTGCGCGTTGGAAGTTGGTTTTTTGTCTTTTCGGCTTTGATACTATGTGGCGGGTTATTTTCTAATTTTGTGACGAAATTTTTTCGAACTGCTTTAATCAAAGTGCTCCCCTCCCGGGATAGGCTGTTCTCTGCCAAAAACGTTTTTCTCACCATATGGCAGCATGACCTAAAAGCTTTTGTCAGAAACTGTGCGGACGTCCCCCGGAAGGTCTTTGGATGATCGTGAGATGTGTTGGAAATATCCTCAATGGGATTGTTGCCAACAGAATGAGGCTCTTGCAGGGCCGAGATGGCAGGTATTATTGGAGCATCCGTCCACAAACCTTTCCAGAAAACCTTAAATATCGGAGGTCTCTGAACTCTCCACTCGGGAGAACGAAGGCAAAGGGGCCCT # Right flank : GTCGTAATCGCGGCTGGGAATGAGTTTGTAGTCATCGGTTTCAATAAGCCCTGGACCTACAAAAACTCCCCGAGCAGCAGGTCATCCTTCGTCCCCCCCGCTTTCTTGAAGACCCTCTCGCTCCAGGAGACGTTCCCAACGTCCCTCGGTCTGTGGGCGTCGCTAGCGAAGACCAGCTTTACGCCGCGCCTTATGCATTCCCTTATGAAGCCGAGGTCTGGAACGCGGTAGCGGGAGCTTATCTCGAAGGCCTTTCCGTTCGCCTCCGCCAGCCCTATGAGTTCTCTCAGGCTCTCCTCGTCGGGATAGCCTATGTGCGGAAAACTCGCTCCGAAGTGCCCGATTACGTCAACGTTCTCGTCGAGGAGGGCTCCCTTCACGAGCTCAACGTATTCCTCCGGGTCGTTCATCCAGAGATGGACGCTGGCTGTGACGTAATCGAGCTTTTCCACCATTCCTGCGGCAACGTCAACGCCGCCCGGGGTTATGTTGGCCTCAAC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAGGAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 126373-132302 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUT01000007.1 Thermococcus sp. 21S7 NODE_7_length_164507_cov_25.582759, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 126373 30 100.0 37 .............................. GAAAAGTGATAATTGACAACGACTACAACGGGAAAAC 126440 30 100.0 37 .............................. GACAATTAGATCGACATAGTCATTAACCTCAATAGAA 126507 30 100.0 37 .............................. TCAAACTCGAACGCATTCAGAATCTTCCCTGAAACCA 126574 30 100.0 38 .............................. TAACGGTCCGTGTCAAGAATGATTCAGATAGTCCCTTC 126642 30 100.0 36 .............................. TGGCAAGGGTGTAGAGGCTCTTGTGGTATGATAAGT 126708 30 100.0 35 .............................. CCGGGTCCCTGGTTAGCTTGCGAGCCATCCTCAGG 126773 30 100.0 38 .............................. ACGAAGCCTCTGGAGGAGGTGAGGGATGACCCCTCAGC 126841 30 100.0 38 .............................. AGGGCCGGCTCGTTAGGGTCGGCATCTATACTTTCCGC 126909 30 100.0 36 .............................. AAGCATAGGAAGATAATCGTGAAGATGATAGAGGCC 126975 30 100.0 36 .............................. GGAGAACAAACCGGGCTTGTATGACAGAGTTTCAAC 127041 30 100.0 36 .............................. GGGAGCGAGCTCGGCGACATAACGGAGCTGATAAAG 127107 30 100.0 38 .............................. GAAGAGGTCGAGGTTCCTGTCCCGGTCGCACACCTGCC 127175 30 100.0 36 .............................. ATGACTTCCACGTGTCGTAGTCCTTTACGCCGGCCT 127241 30 100.0 37 .............................. ACTCCCAAAATGTTATTTTCCGACCCTTTTGGGTTTT 127308 30 100.0 37 .............................. TCAACCTATTCAGCACAGGCTTTGTTTCCGGGAGGGA 127375 30 100.0 37 .............................. CCTCGCTAACGAAGACTTTGCCAGAGAGTTCGGCAGG 127442 30 100.0 37 .............................. CTCGGAGATCTTATTGTGTATGCAATATTTCCTCAAC 127509 30 100.0 38 .............................. TTTTCCGTGTTACTGACTGAAGGATTTTTTTGTCTACA 127577 30 100.0 36 .............................. GCCTTGACAGTGCCCGGCGCCTGAACGTTCCAGTCG 127643 30 100.0 37 .............................. ATAACCCGCCAAATTTTGCCAGCGGGTGGCTGAATGA 127710 30 100.0 39 .............................. GGTAACTGAACGGCTGGACCCAGGGCTGCCCCTGCTTGA 127779 30 100.0 36 .............................. CTTATCGGTGAGCGTACGTATATCTGGTTCGGTAAA 127845 30 100.0 38 .............................. CCGCCCGTGGCGGTGATAGCCGACGTCAGGGTCATCAA 127913 30 100.0 37 .............................. CGTTTCTATGTAGTACGGTAGCTTCGTCCGGGTTCCC 127980 30 100.0 37 .............................. CCCAGAGGACGCGGAAGATGCCGTCGCGGACGCCTGG 128047 30 100.0 37 .............................. CTTCGAGAGAACCCGCTCAATCTGCTCCTGAATCGAG 128114 30 100.0 38 .............................. CTCTGACATCATAGAAGTCAGAAAAGACGGCTCTCTCG 128182 30 100.0 38 .............................. CTGTCGAGACAAAGCCCGCGTTGGTGTACTCCAAGATG 128250 30 100.0 38 .............................. AATGGACTTCCAAGGCTCATTGAGACTATGATTTTCTC 128318 30 100.0 38 .............................. CGGAAATATCGCTTGCACGGCTTTGGCATTAAGTTCGG 128386 30 100.0 37 .............................. GCCGGCCGATATAAACCAGAGCATCAGCGTTGCTCCA 128453 30 100.0 36 .............................. GAAGACTCGTGGAGTGATAACCCGCGAGCAACACCT 128519 30 100.0 38 .............................. TGCTCTCACCCTCCCATCACGAACTTTGGAATGAGCTG 128587 30 100.0 37 .............................. CTCTTCTGCTTCCCCTTCAGCAGATTCTTCATTTTCA 128654 30 100.0 38 .............................. CTCGGTGCGGAAGACGGAAAAGAGTATTCACTTCTCGG 128722 30 100.0 38 .............................. TGTCTTTGTCAGTTAGTTCGACGAGTGGTCTAATTCTA 128790 30 100.0 37 .............................. AAGGTGGGGGGCTTTCCATTGACTTTAATCAAAGGAT 128857 30 100.0 38 .............................. TTTTTCACCCTCCAACGCTGTAGTCCACGATGATGCCT 128925 30 100.0 37 .............................. TATTTCCTTTATATAGAATCTATATGGAAAATCGAAG 128992 30 100.0 37 .............................. GGTGTCGTCGACGCCATCCAGGTTGGTGTCGAGCTTG 129059 30 100.0 37 .............................. AGGATTGCCGCGACGCTGAAGCTCACAACGCCCTTGA 129126 30 100.0 38 .............................. ATCAAAAGACTACGAGGTGATGGAACATGGGGGATATG 129194 30 100.0 40 .............................. CCGGAGAGGCCGCTCGACCTCCAGTTTAAGGACTGGCAGA 129264 30 100.0 37 .............................. TGAGCGGGACGCCGGCCCCACCCTCGACCTCAAGCGG 129331 30 100.0 38 .............................. TGATTATCACCTGCCCAAGAACGAGTCGCCCATTTATA 129399 30 100.0 37 .............................. TGAGCGGGACGCCGGCCCCACCCTCGACCTCAAGCGG 129466 30 100.0 38 .............................. TGATTATCACCTGCCCAAGAACGAGTCGCCCATTTATA 129534 30 100.0 36 .............................. GGAGCGAGCTCGGCGACATAACGGAGCTGATAAAGT 129600 30 100.0 35 .............................. CCCCTCCAACCGACGGAGCCAACGGCGTCCACAAG 129665 30 100.0 37 .............................. TCATGTAAATCCACGCCGCAAACTTCTCCAACTGCTG 129732 30 100.0 38 .............................. TTCTTCTCGTAGATGCGCTTCTCGTCAATGAGGTTCTC 129800 30 100.0 38 .............................. TGAGGATGAGCAAGGCCACCACGACGTTCAAGGAGATT 129868 30 100.0 38 .............................. GAAAGGTGCAGGGTTCAGCAGGCCATAGGTGCCGTTCA 129936 30 100.0 37 .............................. CTCGATAAACCGCTCGGCTGAGACCTCCCAGAAAGGT 130003 30 100.0 38 .............................. AAAATTGATGGGGGGCGCTCAGCGCCTCCAGTCGATGG 130071 30 100.0 35 .............................. GGGAGCATGAGGCCCTCCGGCAGGTCAATGAGGAA 130136 30 100.0 37 .............................. AAATCTTGGTAGCTTGGTCGCCCATAACAACCACCCA 130203 30 100.0 37 .............................. GCTGAGGATGCTCGCTTGGGTCATCGCATATCACCAG 130270 30 100.0 36 .............................. AAGGTCGGGTTGCCGAGGGCGTACTTGACGGCCTCG 130336 30 100.0 38 .............................. GACTTTTTGTCAGGCGTCGCCTTCTGCAGGGTGTTGTT 130404 30 100.0 35 .............................. CCTGATAATCGACCCGGCCATCACAAAGGACAACA 130469 30 100.0 37 .............................. TGAGTTGCGGGCGAAGGTACTCGCTCCAGTCCTCTAT 130536 30 100.0 37 .............................. GCTTATCACGTAGTTCCAGTACTCATCTGGGTCCTTG 130603 30 100.0 35 .............................. GAGCTCGTGGGGGGAGACCTCAATGCTTTTTTAGA 130668 30 100.0 37 .............................. AAACTGAACGTCTTTCACGACACTCGGCGCCTCTACA 130735 30 100.0 41 .............................. AGTGGAGTCCGCGGGGCACGTGAGACGGGCCCATAATTGGA 130806 30 100.0 36 .............................. TCTTTTCATCAGCTATCGCAGAACCTTCCCCCGCAG 130872 30 100.0 38 .............................. GACGGGGGTTGTGGGGGGATGCTAGACGAAGGGTTTAC 130940 30 100.0 36 .............................. CTTCATATACTACGTCGTCGAAGTATACCGTTGTGC 131006 30 100.0 37 .............................. AGCTATTTCGGTGAAAACGTTCGCTTTAAGCACTGCC 131073 30 100.0 37 .............................. CCCAGAGCCTGGTAAAAAAGTCAAACTGAAGTGGGAC 131140 30 100.0 36 .............................. CAGTGATTACAAACCACGCCTCTGCTATCATTCTGC 131206 30 100.0 37 .............................. AGAGGGTCCGCTCCTAACGCTCCGCGCAAGGATCTCC 131273 30 100.0 37 .............................. TGAACTTCACTTCGACGTTCGTGAACTTCCACATCAG 131340 30 100.0 37 .............................. GGAATCGACGTGGAGGAATTCCTTCAGTGGCTGGAGG 131407 30 100.0 39 .............................. CCTTGGTGAATGGTGTGGCTTGTACTCTGATCTCGTCGA 131476 30 100.0 37 .............................. TATGTCGTCGCGAATCTGATGTATCCGCGCTCGCACG 131543 30 100.0 38 .............................. ATACCTCATCGTCACCGTCGTGACGGCATGGGACGAGA 131611 30 100.0 36 .............................. AAGACATAGGCTTCCTCCAGAATCCAGTAGAGAACC 131677 30 96.7 36 .C............................ CAATTATCCTCAAATACATGGAGATGGACATTATTG 131743 30 96.7 35 .C............................ AGCTCCTCGGCAAGGAGTCTGAGGGTATTGAGAAG 131808 30 96.7 36 .C............................ AAAAGCAGGGCTGGATTAGGAAGGGCGTCGCTGAGG 131874 30 96.7 36 .C............................ AGGAGCTACCGACTGCGGAAGGTTGAAAAAGCGGAC 131940 30 100.0 36 .............................. CTAAGAGTCGACGAGATCAGAGTACAAGCCACACCA 132006 30 100.0 37 .............................. AAAAGATGACACGAGGAAGACATCACCCGGGACCTCA 132073 29 96.7 36 .................-............ GGTCTCGACCTGGACCTGTCTCACGAGGTCGTCAGC 132138 30 100.0 37 .............................. ATGATCTACGAAGACAAGCTCGACCTGTCAAAGATGA 132205 30 100.0 38 .............................. AAACCTATACAGCATACTATTACCTCGCTGATTACATA 132273 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 89 30 99.8 37 GTTGCAATAAGACTCTAGGAGAATTGAAAG # Left flank : CTAAAAAGGGCTTTTAGGAGTTGCGATTGTGCAGTATCATATTCAAATGTCCAAAATACATCAAAACTCGGGATCTGAGGAGTATAATCAAAAATACATGCCGGTTAAGCCTCAGAAAGCCTTGAATAACATCAGGTTAGTATGTAACGTTTTGTTATTATCTCTTGTGGGGATATGACGAAATTTTTTCGGGATTCATGGAAAAGCCGCGAGTGCTCTCTAATACGTCCACATATTGATGAAATAAGATATCTGGCTAATTAACGCAGAAACACTTATACTCTAAGCTAATAGGCCTTCAAAAAAGCGCAGGAACTCATAAGAACATAGAAGGTCCAGCTCAAACAGGCCCGTGTTTTTCCATAATGGGGAAATGGAACCCCAACTAAACCTTGGATTAAAGACTTCGGAAGGCCGTCCAAAGCCCCCTCTAAAGAAAGGCTTATAAAAATAAACGCACCTTATTCTTTTATAGGGCAAAAGAAAGCAAAAACCGCCCT # Right flank : GACAATCCCACCCAGAGTCAGGAGTCCTCTCATACCCGGTTGCAATAAGACTCTACTGCTTATTTCGTCGTTCATCGGGACGTGAAGTGGCATCGGATCGTAGTAGTCGAGTCCCTTCATGAGGGCGGTTGAGAAGTACCAGAGCGTCTTCCTGACTTTCCTGCCCTTTATCCTGGAGAAGCTCGCCTCCATGCAGTTGAAGGCCGCGTGAAGGAGAACTATCATGTCTATCTCCACGCCCCGCCGGAGGAGCCTCTCCCTCTCCGGGTCCCTCCTGAGGTCCTTTATCCTGTAGCCGCTTCTCGTCTGCTCATCGTAGGGAACCTCGATGTCGTAGATGCCCTCCACCCGGGGGTCGTAGACGAGGACGTCCGTTCCCCCGACTATGGTGAGCCTCCCGTCCCTGACTTCAACGACCGTGTTCTCCGTGCTCAGAACGGGCATCCCGGCAGCCATCGCAAGGACTGACATGGTGCTCTTCCCGGTGTGGGGATAACCTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAAGACTCTAGGAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //