Array 1 220564-219030 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJWW01000001.1 Enterobacter hormaechei strain e1083, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 220563 28 100.0 32 ............................ TTTACGTACTGCAATAAATTCGTCTTTTGTAA 220503 28 100.0 32 ............................ GATGACGGCACGACGGTCGCGATGTTTTTATA 220443 28 100.0 32 ............................ CATCTGAGTCAGTCGTGCGAGCTGACGTTCGC 220383 28 100.0 32 ............................ CGTATGGTGAACTCCGGTACCGAAGCGACCAT 220323 28 100.0 32 ............................ CCGTAACGGCGTGGCGCAGCCGCTGCGTCTGT 220263 28 100.0 32 ............................ ATGACAAAATTGAAGCTGTTTTGGAAAGGCTG 220203 28 100.0 32 ............................ ACGATTCCCGGTAGCCCTAAGCCCTGGAAATC 220143 28 100.0 32 ............................ GTGTACTTCGACGGATATACCCACTACAGCAC 220083 28 100.0 32 ............................ AGAAACGCTATTAAAGGGAAAAATATTCATAC 220023 28 100.0 32 ............................ GGCACGCTGTCGGCGGGCAGTTAGTTGAAGTC 219963 28 100.0 32 ............................ ATTTCAAACTTTTCCCGGCCAACATGTATAAC 219903 28 100.0 33 ............................ TGACGGGCAGAAGTACACCGATACGCCGATCCC 219842 28 100.0 33 ............................ ATACAGGGCTGCCGCTATAGTGCAAACCAATAT 219781 28 100.0 32 ............................ AATCAACGTGAACTTTCATGGCGCAGAACTGT 219721 28 100.0 33 ............................ TGGCAACTCGATAACGGTGGTTTTACCACGCGC 219660 28 100.0 33 ............................ GACGTGAAAAACATCCACGAAGCCCGGTCTTTT 219599 28 100.0 32 ............................ TTCATTGTGATCATGCCAATCGGTGTATGGTT 219539 28 96.4 32 .........G.................. TGCCTGACTTCCTTCGACTGGGTGAAACGTTC 219479 28 100.0 32 ............................ AGCATCATTCCGCGGCGTGCCGTTCAAAGTCT 219419 28 100.0 32 ............................ CGCGTGCTGGTGCAGAACGACAGCGATATCCA 219359 28 100.0 33 ............................ AGCCGCCTGTTTACCAGTGATGAAGATGCGTTC 219298 28 100.0 32 ............................ TCGTTGCGGGTTGATCAGCATGTCGTCGATTG 219238 28 100.0 32 ............................ TGTGAACTGAATGAGAACGCCGACGGCGTTAG 219178 28 92.9 32 C.....................C..... TTGTTGCTGATCACCCTCCCGTTGTCACCCGG 219118 28 89.3 32 ..A......T..........T....... CGTTGAGTTTCTCGAGCCACGGTTTTGACATT 219058 28 85.7 0 ..T.................T...T..C | T [219034] ========== ====== ====== ====== ============================ ================================= ================== 26 28 98.6 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTAATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAACCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGACCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGAGAGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGATATTTGACCCTAATTTTTGCCCAGAATGTAATGTATTGATTTTTAGATTAAAAATCCTGGGGTGTAAAAAAAGGGTTTGAGCAGTGTTTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : ATCCAACGCAGCAGCATTTCCCACCGCATCCGTGCACCACCGCACAACCAACACAAAACCCGAAACCAAACCCGAAACCCAACCAATCGTTCAAATAATCGACTGTGCTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 231157-230409 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJWW01000001.1 Enterobacter hormaechei strain e1083, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 231156 28 100.0 32 ............................ TTCTGGCGTGTCCGGCGTAGGCCGTCCGGTCA 231096 28 100.0 32 ............................ CGGCTGCAATTAAGGCTAACAGTTATCTTCAG 231036 28 100.0 32 ............................ AGGCTCATCAACTTTATTCGTTGCCTGGGTCA 230976 28 100.0 32 ............................ GGCTCGTCGCTGACTTCTTTGTCCCATACAGG 230916 28 100.0 32 ............................ GCTTGGCCTGACACATACTGTATTTAATCCTC 230856 28 100.0 32 ............................ CTGTGGTGTGCCTGGACGCTAATGGTCGCCTG 230796 28 100.0 32 ............................ AAGCACGATCTCAATAATGTTCTCTCAGTGAT 230736 28 100.0 32 ............................ TGGGCGTAAGCAACTGCTGAAATGAAATCGTT 230676 28 100.0 32 ............................ GTTGCGCACTGAGAGACTGGCTCCGTCCATGC 230616 28 100.0 32 ............................ GCGAACGCCTGCCTGATTGACAGGCCACCCTC 230556 28 100.0 32 ............................ AATGGCCTTATAGCGAGGACCATCAGCAGCCA 230496 28 100.0 32 ............................ TGGAAATTGACAGCCGGGAAATTGAGATCACA 230436 28 78.6 0 ...................T.A..CTCC | ========== ====== ====== ====== ============================ ================================ ================== 13 28 98.4 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGCCTCGGTGCTTATCTGGAAGAAGTCAAAACCGAACTCGCAGAATCAATGAGCGATTTCCGGGTGGTTGAATTTGACGACGAGGCGGAACGGCCAAAGGAAAAAGAGTGGCTTCTGGAAAGTACTGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGACAGATGTGGCTGCACCTGAATATGGAAAGCCTGTAATCCATATCATTAATTAAGTTTAGTGTCGCGCGTCGGGGAAGGGACTCCGGCGCGGTATGTCGCAACCATTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTATGAGAATAAAGGCCGCAGAAAAAATGGTTTTAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CTAAATATTCACTCCAGCTATTTTAAAACCCACAATCATCACCACAATCCTCGTTGTATTTTAAATAAACTCAATACTCATTCACCCCACAACCATATTCCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGACATTCCGATAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTTATCTCCGCTAACATACCCTGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCTCGTCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAGAAATGTCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCGTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTTACGCAAATGGCCATGCGGGAGTTCGCGCGAGCG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 246860-246530 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJWW01000001.1 Enterobacter hormaechei strain e1083, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 246859 28 100.0 33 ............................ CTCACAAACTATTGAGATGATTAACTGATGGAA 246798 28 100.0 33 ............................ TCTTTTATTTTCGAGCATAGTCACGGCACAAAC 246737 28 100.0 32 ............................ GGAACCGCAAACAGAGAAGCGCCACCGCCGAC 246677 28 100.0 32 ............................ AGTGGTCGATGATTCGTGCACGCCACTGCTCT 246617 28 100.0 32 ............................ CTGAGCTTTGAAGGCGAAGTGCGCAAGAAGGA 246557 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 33 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : CAGGAACCCGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACCTCTTCATGGCGGGTGGGCATCCACTCAATGGTCTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAGTCGCCAGTGACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCGTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTACTCTTTAAGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGCGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGATGCATAAGTTGTTGATTTTATATGGTTGGGCTGAAGGGGAATAAAAAAGGGTCTGGAGGAAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGGTGTAGATTGTTTCA # Right flank : TCTTGCCTGATTTGCTCATGCCTTTAGTCACGGTTCACTGCCGTACAGGCCGTAGGCACAATGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTGCCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGAGTTCCAAAGGCAAATGCGCTGGCCTGCACAGACAAAAAAGCCCGGTGGCGTTGATGCTTACCGGGCCTACAGGTGAACCGCGAAAGATTATGCGAGCACAAGATCGCCTTGCGGATGGCACGAACATGCCAGCACATAGCCCTCTGCAATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //