Array 1 48930-48084 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOF010000040.1 Streptomyces sp. CAI-21 NODE_41_length_51722_cov_421.556, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================= ================== 48929 28 100.0 33 ............................ TTCTCCCCGCAGAGCAGGGACAGCTCCTCCAGA 48868 28 100.0 33 ............................ GCTGAAGACCCGCTCCTGGGGCTGCGTGGTGCA 48807 28 100.0 33 ............................ CCGACCTTCACGTACTCCCGGCCGTAGGTCAGC 48746 28 100.0 33 ............................ GACCTGTACCCGGACGTCCGGGACGCCCTGCGC 48685 28 100.0 33 ............................ TCGGCGCCCCGCACCCGCGCGACCGCTGGTTCG 48624 28 100.0 33 ............................ GCGGTTGTCCGACAGCAGAACCGCGTAGAAGTC 48563 28 96.4 33 ......................C..... CAGCACTTCCGGGGCGTCTGGACCCGCCACCTC 48502 28 100.0 33 ............................ CTCCGCTGACGGCCGTGACCGCCTTCGGGGTGT 48441 28 100.0 33 ............................ TGGCCAGTACCTTTGGCAGTCCGCGCTTACCGC 48380 28 100.0 33 ............................ GCTGGTGATCGGGTGGTAGTAGCCGTCGGGCAG 48319 28 100.0 33 ............................ GGCCCTCCCCGAGGAGGGCGCCCCGGAAGGGAC 48258 28 100.0 34 ............................ GGGGACGCGCCTCGGGTGGGCCGGTATGGGTGTC 48196 28 96.4 57 .............T.............. CCAGCGGCGGGCGGCGAAGAAGGCCAGCCGCAGGTGCCGGAACTTGATCTTCCAGGG 48111 28 85.7 0 ....................C.A..G.T | ========== ====== ====== ====== ============================ ========================================================= ================== 14 28 98.5 35 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : TCTCGGCCTCCCGCTGCTCGGCTGTCGCGATCGCCTTGTCGATTCGGGCCAGCCACATCGCGTGCCACGTCCGCAGCACGTGCAGGCGCGGCAGGTCGGCGGGCAGGTCGGACATGTGTTCGAGTCTAGGTATGTTGGTGTCGGCGGCGTGCGGCACCCCCCTGCTTGACTTCGAAACGCCGCCTTCGCCTTCCCCTCCCCTATCAATCCGCCGGCCTGGTACCGGGGCCGCGTCGCCTGCATGGAAATCTCGCTCGCGACGGTCCTCGCCCTGGCGCTCTGCGGCCGGCGGGCCCACTGGGTACTGGGCGCACGGCAGTTGCCCACCAAGGCACATGCGTGGGTATGGACCGAGGACGACGCATACGGGCTGTCCGGCCGCGACCGCCCGGACCCCGCCGCCCCTGGGTCGGCGCCCTCGCCGCACCTCCCGTGCCGAAAGGGTGACGCACATGAATGAAAATGAGGCATCCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : GCAACAGGGCTCTGGGTGGGTATGCAGTCAGACGTGCGGCTGGTCATCTGTCACCCCGCTGCCCACCGCGCCGGTAGCCTTAGTACTGCAACGGTGCTTATCGTGACGAGGCTTCAGTTCTTGAGCTGTGGCCTCGTCTCTTGCAGTGGCTGGTCCGAGCCTGGTGTTGGCGCCGTCGCCGCCAACGGGACCAGTGCAGGACGTGGGCGATGCTGCGGTGGACAGGCTGCGTGAGGCCGGTGATCAACCGGCGGATCTCGGGGACGGTGAGTGAGATCAGGTCTGGCGTTCGAGCAGGTCCGGCCCCTTTTCAAGCTGCTGGGCCCGCACGACGGTCAGGTAGGCGTGAACGGCCATCGCGAGGGTGATGTGCCGGTGCCAGCCCGGGTGGCGGCGGACCTGGTAGTCGTCCAGGCCGCACTGGCCCTTCGCGGTTTGAAAACACTCCTCGATCGCCCAGCGGGCACCCGCGACGGCGATCAGCTCGTTGAGCGTGGCCT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 51484-51211 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOF010000040.1 Streptomyces sp. CAI-21 NODE_41_length_51722_cov_421.556, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 51483 29 100.0 32 ............................. GTCCCCGTGGCGCGCCAGGCGCCGCCGGGTAC 51422 29 100.0 32 ............................. CCACCCCGGTCGGCGCTGCCGGGCACCAGCTC 51361 29 93.1 32 .............CT.............. TCGTGGAGAACGTCGGCGGCCTGGTCGATGTC 51300 28 93.1 32 ............-...............G TACCTGAAACCGCAGCGCCTCTTCTTCGTCGG A [51285] 51239 29 89.7 0 ...........G.C.............T. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.2 32 GTCGGCCCCGCACGCGCGGGGATGCTCCC # Left flank : GCCGCCACCGCTGGACCGTGGAACGCACCATGGCCTGGCTCGCCGGCTGCCGCCGACTCCACCGACGCTACGAACGCAAGGCCGACCACTTCCTAGCCTTCACCAGCATCGCCTGCACCCTCATCTGCTACCGCAGACTCACCAAATGAGATGACTTCTAAAGGCAACTGCACCCTGCGCAGGCCGTTTCGGGCCAAGGGGCGAGGCCGGCGAGCCCGAGGCCCGCGGGTGCGTCAGG # Right flank : TGTCCGAGCGGGACGCCGCGCTCAGCGTGAAGTCGGCCCCGCACCTGCGGAGGCACCCCGCTACCTGCGGCGAGGCTCGCGGGCCACGACGTGTCCTCTCGGCGCGAGCGGAGGTACCCCGTTGATGCCGTGCCCGAGGACGACGACGCCCTCTCCAACGTGAGCGGAGGAAGCCCGCATCAGGACCTCGGCCAGGGAAAAGACGAGGCCTCTTCGCGCCTGCGGGGATGCTTCAATCTCACTGGGGAGCGGCGCGGTCAGCGTGCGGCTGTTCCCGCGCTCGCGGGGATGGCCCTTGGCGGTCATTTCGGCGAACGGCACGTTGGCTCCGTACTGAGCTGAGCACCCGCCGGGCAGAGTTATTCCATCCGACCAAGGGAGAGACTGCAGTGTCGTCCGTTCCCCGCTCAGAACGATACGAGAACATCCCGACCGCCTTGGTGTATGACATCTTCGCGGAGTTGGCCACCCAGCTCACCGGTCGCTACATCCGTCTGTCC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACGCGCGGGGATGCTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACTCGCGGGGATGCTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-21.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6550-6399 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOF010000062.1 Streptomyces sp. CAI-21 NODE_65_length_35805_cov_404.047, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6549 29 100.0 32 ............................. CTACAGGCGCCCTTTGACGCCGCGCCGGTCCC 6488 29 100.0 32 ............................. TCGACGCTGGCCAGCTCGAAGGTGGTGGGCTC 6427 29 79.3 0 ..............G......CAA.C.T. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 93.1 32 GTGGTCCCCGCGCACGCGGGGGTGGTCCC # Left flank : GGGGCAAGCCCACACCGCGCCCCCGCTACGCCACCGGCAAAGTCCGATACCAGGCGAACTGCTCGTGAGTGGGCATCCAGTGCTGGCCGCACCGGGAGCAGTACCAGCGCCAGTTGTCGGGGTCGTTGCGAAGGTACGTCGTGTCCTTCCAGAGCCGACCGTGGATGTCCGTGTGGCAGGCCCGGTCAGGACAGGGCGGGGGAACGGGCGTGGTGCGCGGGCGAGTTGTGGTCAGCATGGGCGCCTCCGTGACTCGATGGGGTCAGGAGGGTGAAACGAGGGGGCTCGGGGCTGGGTGTGGGGCCGGGGCGAGGTGCGTTCGTTCGCGTGATGAATGGGGGATGAGATGCGCGGGGGGCCGAGGTCTGCTCCGTCGCCTCGGTCCGCTGCGTAGGATCTAGCGAGGGCTCAAGGCGAGGTGGGTATTGGGGCGAATGTCGCTATCGGTGAAGCGTGCAGAAACTGGGGCAGGGGTGCCGTAAGGCCGCTGTTCAGGGAGG # Right flank : ACCCCGACCCGGCGCCAAGCGCCGCCACCCGCCTTGCTCCCCCCACCCCCACCTCCTACCATGAATGCGCTTTCACAACGCGTGAGGCGGGTCGGTGGGCTCGGGTTCTGGATGGTCGGAGCGGGCGGGACGGGATGAGGGTAGGGGCGCGTGGGTGACGGGGTGGCGGGGACGCCGACGGTGTATGACGTGGCCGGGCGGGCGGGGGTGTCGATCGCGACCGTGTCGCGGGTGTACCGGAGTCCGGAGTCGGTGCGGGAGGCCACGCGGGAGAAGGTGCTCGTGGCCGCGCGGGAGCTGGGGTACGTGCCCAGCGGGAGTGCGCGCGGGCTGGCCAGCCGGTCGACGGGGGTGCTGGGGCTCTGCTTCCCCGACTACTCCGACCCGGACGCCGAGAGCGAGGCGGCCACGGTGGACGCCGACGACGACCACGCCTTCATGCTCTACTCCGACCAGATCATCCGGGGTATGGAGCGGGCCGCGCGACGGCACGGGTACGC # Questionable array : NO Score: 5.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [2,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 20153-19882 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOF010000010.1 Streptomyces sp. CAI-21 NODE_10_length_113579_cov_420.315, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 20152 28 100.0 33 ............................ GAGGACGCCGATGCCCATGGCACCGCGCCGGAG 20091 28 96.4 33 ...................A........ AGCGCTGCCGGTGAGGTCGGCGCGGCTGACCGG 20030 28 100.0 33 ............................ GCTCTCCGACCGGGCGCACCGGGTCCTGCTCGA 19969 28 89.3 33 ...A...T.............A...... GATGATGCGGCCGGTCACGGCGGTCTTGCCGTC 19908 27 75.0 0 .....G.T.....AA......-..GC.. | ========== ====== ====== ====== ============================ ================================= ================== 5 28 92.1 33 GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Left flank : ACACCGACGCCGACATCACCCGAGCCGTCGAAGCCGGCGCCACGGGCTACCTGCTGAAAGCCGAACGGCCCGAGGAGCTTTTCACCGCCATCAGGGCTGCGGCTTCGGGGCGTACGGCGTTGTCGCCGCCTGTGGCGCAGAGGGTGATGACTCACTTGCGGAACCCGCAGCCGGAGCTGACCCCGAGGGAGCGGGATATTTTGCGGCACTTGACGCAGGGGCTGGGGAACCGGGAGATTGCCCGGGCGTTGTTCATCAGCGAGGCGACGGTGAAGACCCATCTGGGGCGGATTTACCAGAAGTTGGGGGTGGAGACACGGGCGGGGGCGGTGGCTGTGGGGAAGGAGCGGCGGTTGTTGGGGTGAGGGGTGGGTGGCGGGGGTGGGTTCGTGGATTAATGGGTGGGGTGGGCGGGGGGTGCGTAGGTTGGGGGCGAGAGGGAGGGGGCGATGATGAGCAAAGGGATGGCAAAGGCACTCTGAAGGTGCAGGTGGGCAAGG # Right flank : AGGAACCGATGCAAGGCCGGTGCAGCAGACAGGTCACGCCCGCAGGCGCAAGAGCCCCGTCGCTGAACGAGTGACGTTCCCGGGTTGGCCGCTGATGTCCAGCCGCCGCGAACCCGGCGGCCGAGTGGGAGCGCGAGTACTAGCGACCGCCCCCGACGGCCCTCTCCACCTCCCCCAAAGCCTCCTCCCATCCAAACCCAGCCGCATCCCCCCGCTTAGGCGAATGCGGCTCCCCCTCGGTGAAAACCACCCGCACCCCCTGCCCCCGCAAGGTCTCCACCGCCCGCCCGACCGCAGGCTGCGCCCCCAGCGCCGTGGACCAGAACGGCGCCGCGACCACCGGCACACCGAGATGTACGGCCTCGGCCGGCACCCCCAACGCCACCGTGTCCGTGATCCCGGCCGCCCACTTGCACGCGGACGTGGTGGTGAGCGGCGCGACGAGCATCGCGTCCGCCTTGGGCAGCCCGCCGGACTGGCCGGGCAGGGTGTACCGGTGC # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 84539-84753 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOF010000020.1 Streptomyces sp. CAI-21 NODE_20_length_88890_cov_408.62, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================== ================== 84539 24 100.0 40 ........................ TTTTGGGGGTGCGGTCCGTGGTGACCGTGCCGGTCAAGGA 84603 24 100.0 40 ........................ TTTTGGGGGTGCGGTTCGTGGTGACCGTGCCGGTCAGAGA 84667 24 95.8 39 ........A............... GGATTCGGCGGGGGTGGTCTTCCTGTGCCGGTTGCCGAG 84730 24 95.8 0 ........A............... | ========== ====== ====== ====== ======================== ======================================== ================== 4 24 97.9 40 TGGCCTCAGGCGCCGGCCGGGCTG # Left flank : GCGTCGGCCCGCGCGCTGTGCTCGCGTACGGCCGCCGGGTTCTCGCCCTTGGCCCACTGGCGGCGGGCCTCCGCCAGTTCCGTGCGGGCCGTCGTCAGGGCCGCCTCGGCGGCGATCAGGGCCTGCGGCGGGGCGTCGGGGGAGGCGGCCGCCACCTGGGCCGCCCTGATCCGGATCGCGTCCTCCGCCTGCTCCAGGGCCTCCGCCGGGGAGAGCACCGGGGTGCGGGTGTCGCCGCCCGCTCCCCATATCTCGGTCCCCGCCGGGGTGGTGCGGGTGCTGACCCGGCGTCTGCGCCGGCGGTACGTGTACACGGCGGCGGTCAGTGCGGCTGCCAGCACCAGGATCGGCAGGATCAGGTCCGCCCGCACCGTGTCACCCTTCGCCGCGCTTGACCGCTCCTTCGGAGAGTAGGGCGACGGGGTCGCCCTGGCGAGCGGGGAGGCGGGAAACTCCGCTCAACGTGGGGGGTGTGCGTGGACAACCCGCCCGCCCTGGCG # Right flank : GGAGTGGATGTGGGGCCCACCTCCGACATCCCGCCTCACAACAGCCCCACCGAACGACCGAAGGACCCCGACGGTCCAGCCCAACGGGGCCCTTCTGTTCTCCAGTCGCGCCACCGAACAACCCCACCCGGCCCACTCCCGGCCAAAGTCAGCCCAGCCAAATTCCAGCCCGGCCGGCGTTTGAGGCCATCCCTGAGCCGCGGCCGAAGGCCGGAGCCCAGCCAAATTCCAGCCCGGCCGGCGCTTGAGGCCACCTCTGGCCCGCGGCAGAAGCCGCCGCCAAGCCCTCACAGCCCGGCCGGCGCCTGAGGCGGGCCCAGTCGGTGGGGGAGGCGCGTCTGCCCGGGTGGAACCCGTACCCCTTCGCGGCGTGTCGGCGTGACGGGCCCGCGCCGGAGGCGTTCCGTGGCAATAGATGTGATCAGCTCCATATACCGCCAAACGTGATCAAATCCCGGTGACTCCCGGAGGTACGCCCCATGTTCCACGACGGCGCAAGA # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGGCCTCAGGCGCCGGCCGGGCTG # Alternate repeat : TGGCCTCAAGCGCCGGCCGGGCTG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [26.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //