Array 1 139214-136127 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGWV01000010.1 Leptothrix mobilis strain DSM 10617 Ga0310535_104, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 139213 29 100.0 32 ............................. GCCCCCGCCAGATCCAGCAGGCCCTTGTAGGT 139152 29 100.0 32 ............................. GCCGCGCGCTATGCCGTGCTGACCGAGAAGAT 139091 29 100.0 33 ............................. ACACGCCCGTGATCGCAGCAGCGGCGGCCACGC 139029 29 100.0 32 ............................. ATTGCGGACAGCATCACGGCGTCAGGGCAGTT 138968 29 100.0 33 ............................. ATGTGCACGATCAGCTTGTCCGGATCACGGCCC 138906 29 100.0 32 ............................. AATTTTGTTTTCATCTCCCGGGATGCATTTTT 138845 29 100.0 33 ............................. TGGCCAGCTCGCTCACGTCCGGCGGCGCGGGGA 138783 29 100.0 32 ............................. CGGCCATGATCGCGGTGCGGCGATCGGCTTCA 138722 29 100.0 32 ............................. TTTGACGAGCTGGCCGGCAAGGCTGGGGCGTT 138661 29 100.0 32 ............................. GTGAATTACTCGTAAAGACCATTCCCGGCACC 138600 29 100.0 32 ............................. AGGCGCTGGCGATGCTGGCCCTGGTCAAGGCG 138539 29 100.0 32 ............................. TCACATCACCCGAAAGACCGACATGAACGCGC 138478 29 100.0 32 ............................. CCTGGTGGGAATCGCTGGTCATGTACGGCGCA 138417 29 100.0 32 ............................. CTGGGGCCTCAGTACGGCGGCAAGGTCAGCAC 138356 29 100.0 32 ............................. TCGGCCCCGGAAAGCAAAACGCCGCGCCAGTT 138295 29 100.0 33 ............................. GCCGTGGCCGCTGTGGGCGATCTTGTGGCCGCT 138233 29 100.0 32 ............................. GTCCAGTCCGCTATCGACAAGATGAAGGGCAT 138172 29 100.0 32 ............................. TCTTCGGGCACGTTGACAGCGACAGCGACAGC 138111 29 96.6 32 ..........T.................. TCCGCATCGGCCCGGCAGCCAACAGCCGATGA 138050 29 100.0 32 ............................. CATCGGACGCGGGTGCAGTTGCCTAGGAAGGT 137989 29 100.0 32 ............................. ACCCCGCCGCCGCCGCGCGTGACCGTCACGCG 137928 29 100.0 32 ............................. TCATCGACCAGGCCGGCGGACCATTCCGAGTC 137867 29 100.0 32 ............................. CGCTATGCGGGCGCGAATGCCAACACCTACGT 137806 29 100.0 32 ............................. ACCTTCGTCTACGACCCGGCCGGACAGCTCGA 137745 29 100.0 32 ............................. TATGCCTATATAAATCAACGACTTACGTGCAT 137684 29 100.0 32 ............................. GCGTGCTCTTGCTTCCAGCCGCGCACGAAGAA 137623 29 100.0 32 ............................. AGCCCCGCACTGCCGGCGATGTCCGAATCTGG 137562 29 100.0 32 ............................. ATGCGGTTCATGTTCACAGTCCTCCGGGGCCG 137501 29 100.0 33 ............................. CGAGACGCGACGATCTACGCGGGCGACCGCGTC 137439 29 96.6 32 ............................C TGATCGCCGTCGGCGCAGCCCTGGGCCAGCAG 137378 29 100.0 32 ............................. ACGCTGCAGGGCCAGGCCCGCGTGCTGCGTCT 137317 29 100.0 32 ............................. TCCTCATCGAGCTGGCCGTCAGCAGCCTGCGC 137256 29 100.0 32 ............................. TACCTGAGCGAAACCGGTCTGGCGCTGATGGA 137195 29 100.0 32 ............................. GGCCTGAGCACGCCGGGCCGGCGGCGCGTCGT 137134 29 100.0 32 ............................. CGGGCCGCGCGCTGGATGTCGGTCAGCGTGTC 137073 29 100.0 32 ............................. TGCGAAGCCCAGGCCGAGCGCGACGGCATCCA 137012 29 100.0 32 ............................. GCGGTGCAGCATGACCGAGCGCCCGATCCTCT 136951 29 100.0 33 ............................. TACATCAGCAAGAACGTCGACGGGGTACACGTC 136889 29 100.0 32 ............................. AAAACAGCACAGGGGATGGCCATTGAATTTGA 136828 29 100.0 32 ............................. TCAGCATTGATGTTCTCCAGGTTGGACAGGGT 136767 29 100.0 32 ............................. GGCCAGCACGACAGCCGCGCGCGACTTGTCGC 136706 29 100.0 32 ............................. TTGTCGACACGACCGGCAAGGGCCAGCACGAC 136645 29 100.0 32 ............................. GGGTGGACACCAAAAGACTACAAATAAACCGG 136584 29 100.0 33 ............................. CGGGCGGGCTGCTACGCCAGTGACGACGCGTGC 136522 29 100.0 32 ............................. ACCGCCGTCGCCGCCAACAAGCTGCCCCCGGC 136461 29 100.0 32 ............................. CCCGCCTGACCCACGCCGTCGAGGCCTACCAG 136400 29 100.0 32 ............................. CCCTGAGGGACCGTGCCCGCTGGACGGCCAGC 136339 29 100.0 33 ............................. CGTTGTAGATCTGCTGGGCCGTGCGCGCTTCCG 136277 29 100.0 32 ............................. CCCTTGATGCCGATGCAATAGGTCTCGATGTC 136216 29 93.1 32 .............C...A........... GAGGCAGACATCGAGACTCGCTGGAAGGCCAG 136155 29 96.6 0 ...T......................... | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.7 32 GTGGTCCCCGCGCTGGCGGGGATGAACCG # Left flank : ACTGCTCGATCGCATCATCCCGGCCATCGAGGACATCCTGGCTGCGGGCGAGATCGAACGCCCTCAGGCACCGACAGACGCCGTCGGCCCGTCGATCCCGAACGCGGACAACATCGGCGATGCTGGTCATCGTTCTTGAGAACGCCCCGCCACGCTTGCGCGGCCGGCTTGCCGTGTGGCTTCTGGAAGTGCGTGCTGGCGTCTACGTCGGCACCTATTCGCGGCGCGTCCGCGAACACATCTGGGCGCAAGTCGAAGAAGGCCTGGAGGACGGCAATGCCGTGATGGTTTGGCGCAGCACGGCGGAGGCCGGCTTCGAGTTCAAGACGCTCGGCACCAACCGCCGCATGCCGGTCGATTTCGACGGCGTGCAACTGGTGAGCTTCCTGCCGGAAGTGCCCGGCGGCGCTCTTTAGAAAGTCGCAAGAAGGATGTGCTGTCAGGTTGGTAGAACATCCCGACCTCAAATAATCATTGCCTGACAACAACTTAGAAATGGT # Right flank : ACCAACGGCGGCGCTGGCACCTGCGGATTCATGTGGTCCTCGCGCCGGCGTCAGCTGGGGCGACGCACCCCCTCAAAAACCCTCGCCTCACACCCCCCATCCCCACACCGCCCACACGCATGCCGCCACACCGGCCCGCGTGGCGTCGTGGGGTCGCGGTCGCGCTCTTGGGCGGCTTGGCGGGTCTGCCAGGCCGAGCGTGCGGCGGTGAGTTGTTGGGGCAAGGGGCCGCTCACCACCGCGTGGGCGGCGCGGGCGCTGAAGAGGGCCAGGCGCAGCTGGGTGGTGGCGGGGTCGGGTCTGGCGTCGGAAGGGCCGATCAGCACGAGGAACATGTCAGCGGGCCAGTCTGGCGCGTGACCCTCGAGCACGGCTTGCGCCAGTGGCGAGGCGTCGAGAACCCCGTGTTCATCGGCCTTCGCGTCGATCAGGGCCTGGACGAGGCGCTTGCAGGCGGCGGGGTCGGGGCCGATGACCGCGAGGCGCTCGGCGGTGGCGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCTGGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTCGCGGGGATGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //