Array 1 114870-115901 **** Predicted by CRISPRDetect 2.4 *** >NZ_LN898209.1 Olsenella massiliensis strain SIT9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================================= ================== 114870 29 100.0 33 ............................. TCGGAACTCGTGCTTCTCGTGAAGCCAGAACTT 114932 29 100.0 33 ............................. AAGGTTGACGTGCTTGACTGGCGGTTCGGGTTC 114994 29 100.0 34 ............................. AACAGGGCGGTAGCGAACCTGACGAACGGGTCTT 115057 29 100.0 33 ............................. GGACTTCTACCGCCTGAGGCAGGCGGTGTCGAA 115119 29 96.6 33 ............................T CACCGTCGAGGACGTCATGAAAGACGTGGAAGA 115181 29 100.0 33 ............................. TTCACGCCGAAGGCCTTGGTTCCGCCGTCCATG 115243 29 100.0 33 ............................. CCGTTGGCCGTCTTCAAGCAGACGCGACTCGCA 115305 29 96.6 33 ............................G GCCAAGACGGTCATCATAAGCGGCTCCGACATT 115367 29 96.6 33 ............................T GCCTCGAAGGCGCATGAGGCGACCCCGCAAGAG 115429 29 100.0 33 ............................. CCTCAGGAATGATGCGGTCCATGCAGTCGCCCT 115491 29 93.1 33 ...........G................T CCGGGTATCCGGTTTTCAAGGTGCGCAAGGCTT 115553 29 96.6 33 ...........G................. GAAAGCTGCCCGAAGGCGATTGTCGAGGACTTC 115615 29 96.6 33 ...........G................. CTCGTGCCGGCGTCCCTGGCGCTCCGCCTGCTG 115677 29 93.1 33 ...........G................T GAGGGCGAAGCAAAAGCAGACCGAGAAGGCCTC 115739 29 93.1 105 ...........G................G CAACGTGAGGCGCTTCATATAGCAATTGAGGCCAATCCCTCCCAAATAGGTGGGTGGGAGTTGGCCTCGCCACCAATATACCCATCAGCGACACGTCGTGTCAAC 115873 29 93.1 0 ...........G................G | ========== ====== ====== ====== ============================= ========================================================================================================= ================== 16 29 97.2 38 GTGCTCCCCGCACATGCGGGGATGATCCC # Left flank : AGGTCCCTTCTGGACGGTCGTATGGCCGAGATTTGGAGGAGGGTTGAATGGTTGTCATAGTGCTGACCGCCTGCCCCGCAGGCCTGCGAGGTGACTTGACGAGATGGCTGCTTGAGATTTCTCCCGGCGTGTACGTGGGGCACCTCTCTGCCCGCGTTCGCGAGGAGCTTTGGAGTCGTGTGACCTCCCTGGTGAGGGAGGGAAGGGCGATGATGGTTCATTCGGCACGGAACGAGCAGCATCTGGCGTTTAGGGTCTTACGACCAGACTGGGAGCCTGTGGACTGTGAGGGTGTGACCCTGGTGTCGCGAAGGCCGGACGATGCGTACCATGGGTTTCAGGGCAAGATGAAACCCGGCTGGAGCCATGCGAGCCAATATAGAAATGCTCACAGGTTTCGTGCTCAAGGAAAGAAGAACTATTTTTTGCCAGACGAGTCAGCGGATGAGAAAGTGAACTGATAATCCGCTACGGCATGCTTGACGTGCAGGAAAATAAGC # Right flank : GGTCGTGGCCAAAGAGCAGGTGACCGCATCCAAGTGCCCTATGATTTCCTTCCGGGCGCTCTCGGTCATGTCAGCCGCGCTGTGCTCCCCGTGTTAAGCGGCCCACCTGTCTGGGTTTCGCCAGATGATGTACGTAGGGGGCGCTTTGACGTTGGCGCCCTGCGCGCCTTTGCCGGGAAGTGGGGCGCCCCATTCATCTTCGCCTCAGCAACTCAGAATGATGTCCGTGGCCAACTGGCAAGTTAGGCGTCGTCAATGCGTATGACTTCGTCAACCAGCGCGGCGACTTCTTCAATCACATGGTGACATCGGCCATCAGAACCATTTCACGCGCTGCCCGCCCTTGCCCTGGGAATGGGACTATCTTTGCCGAAGCCGATGTAATAGCGGTAACTTTTGCCAATGTAGTAGTTCTCCGTGAGTTCGCAATAGCCGGCGCTCGTGTCGCGCGTGAGTCGCGTGCGTTTGAGCACGGGCTCCCGCCGTCCGATGCCAAGGTG # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.40, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACATGCGGGGATGATCCC # Alternate repeat : GTGCTCCCCGCGCATGCGGGGATGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //