Array 1 26500-27433 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH804679.1 Bacillus cereus HuA2-1 supercont1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 26500 28 85.7 38 .G.......A....AA............ TTACCATAAGACAGTGAAAGTGGTTGTCGCGTTCATTT 26566 27 89.3 37 .............-A........T.... GAAACAAAAAGGCACTTACTATGATCGTGTACTGTGA 26630 28 85.7 37 ..........G...AA.......T.... GTATTTACTCGGAAGAAACGACAGTGGTATAACATGA 26695 28 89.3 37 T...C.........T............. TGATCTCATGGGATACAGTACAATAGCGGTAGGTGCT 26760 28 82.1 37 T...C.........A.A......T.... TTACTGTTATGGCGACTATACTTATGTCGACAAGATA 26825 28 85.7 36 .CC..........AA............. TTATGAGTAAATTTCCAAGCCATGCTTAGTATTTTG 26889 28 85.7 36 ...C..C......AA............. TATGCGTTCAGTTTCCCTTTTGTCAATTCTTTATGT 26953 28 89.3 36 .........A....A.A........... GAACGGTCGAGGGTTAGGAGAGCATGCCGTTAAAAC 27017 28 92.9 37 .A.....A.................... GTCCATCATTCCGAACACAACGAACTTAACGCCTTTA 27082 28 89.3 37 .............CAC............ GGTTTCCCAATTTTTAATTTGACTCTGACTTAAATTC 27147 28 78.6 37 ..C......A...GTA.....G...... GTCTTGCCGGCCTACATGTACATGGTCATAGTGTCCT 27212 28 100.0 37 ............................ TATAAATAACGAGAAATTACCTATTGTATGTGGAATT 27277 28 89.3 37 ........A.....AC............ CTACACCCAGCGTTTTAATTCTTGCTTGCTTCGATCT 27342 28 78.6 36 .G.....T.A...GTA............ CTTAAGTATCAGGACATCAATGTAGATTTGGTTTCT 27406 28 85.7 0 .........A...GTA............ | ========== ====== ====== ====== ============================ ====================================== ================== 15 28 87.1 37 GTTTTATCTGAACTGTGTGGGATATAAA # Left flank : CGCTTCCACTAAATGATATGAGAAATACAGAGGCACAAAGGTTGCTGCGTGATATTGATAATTATCAAGTAATTCCCTGTTCTATATATAGAGAGAATCTTGATTTATTTACTACATTTAAACAGGAAAAAGATTCTAGACAGCGAAAAGTATTACGAATGCAAATCGAAAAGCTTACAACCTCTATTTCTAGAAAACAAGTTCAACGATACGGAATCGAAACAAAGGAAATTGATATTCCTGGGCTTCAATACATTCACACTTTAAATTGTAAGTATGATTTTGATAAAGAAAAGAGAACAGGAACAGGAATTATACTTCCGTAATTTTGTAGTGATCCCCGCTATTATCAAACGTGTAGAAACTCTTACTATGATAAGGAATTTCAGCATATTGTAAGAGAGTACAAAAACACGATCGATGATTTGTTGCAAAATATGGATTGATACATATGATTAAATGTTTCTATCATTAGGTGTACCATCCGTATATAGATAGGG # Right flank : AAGTTTATAATGAAACCATAGAAATAGAGTCTTAATTAAAAAGGGCTCTATTTCTATGGTTGCTACCTTCAAATTTTTTATCTTTCATTAAATCAATTTCACATTCAAGTTCTTTGGTTTCTATATTTAAAAAGTCCATTGTCATTGCAAGAACTTTTCCATCTTTATTTCTCTTAGATCCCCATAAACGAACAACCCTATTAATTTTACTATCTTCATATATAATTTGAACAGTTCTTAATTCTTCTCCATCCACAAATTCACGATGTATCCAACACTCTTTAAATTCCAAATTCTCATCGGATTTATGCATGTTATAATTCAACATTACTGCTTCTAATTCTGGAAACCCCAAGCCTTTTTTCTCTAAACAAATATACTCAAAATCCCAGAACTCTCTAAAATGATAGATAAGCTCTTTTTGACTTTTCATCATAACTCCCCCAACCATAATTTTTTTAAGCGTTATGTATATTTGATATCTGTTACATGATTAATTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.35, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.14, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACTGTGTGGGATATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [19-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 660464-660336 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH804672.1 Bacillus cereus HuA2-1 supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =============================== ================== 660463 23 100.0 28 ....................... TACAGGTGCCACTGGTGCCACTGGGCCG 660412 23 95.7 31 .....A................. GCCAGCTGGTACAGGTGGTACAGGTGGTGCC 660358 23 95.7 0 ...........T........... | ========== ====== ====== ====== ======================= =============================== ================== 3 23 97.1 30 ACTGGGCCGACCGGACCGACTGG # Left flank : AAATCATCAACCCACGGAAAATCGTGTATGTTAGAAGTGTATTTTGCTACAATTTCCTTCGTTCGATCAGTGGATCCTGTATCAACTACAATAATTTCATCAACAATTTTTTCTACCGCGTCCAAACATCGATCTATTGTATTTTCCTCATCTCGAACAATCATACATAGACTAATTGTAATTCCTTGCTTGTTCAACATAATCACCCTCTTCCAACTCAATCATATGTTATACATACAATAAACTTTCCATTTTTTTAACTTGTTCAAGCTATTTAAGATTTCTTTTCAATAATTCAAATGTCCGTGTCATTTTCTTACGGTTTTGCATCTACTATATAATGAAAGCTTTATGGAGGTGAATTTATGTCAAATAATAATTATTCAGATGGCTTAAATCCCGATGAATCCTTATCAGCTAGTGCATTTGATCCTAATCTTGTAGGACCGACTTTACCGCCAATACCGCCGTTTACCCTTCCTACCGGGCCGACTGGACCA # Right flank : GCCAGCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGGTACAGGTGGTACAGGTGGTGCCACTGGGCCGACTGGACCGACTGGGCCAGCTGGTACAGGTGGTACAGGTGGTGCCACTGGGCCGACTGGTGCCACTGGATCAGCTGGTGCTACTGGGCCGACTGGTGCTACTGGATCCACTGGTGCTACTGGGCCGACTGGTGCTACTGGACCAACCGGGCCGACTGGACCAACCGGGCCGACTGGACCATCTGGATTAGGACTTCCGGCAGGATTGTACGCATTTAACTCTGCTGCAATTAGCATATCTCTTGGATTTAATGACCCAGTACCATTTAACACTGTTGGATCTCAGTTTGGTACAGCAATTTCTCAATTAGATGCTGATACTTTCATCATAAGTGAAACTGGATTCTATAAGATTA # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTGGGCCGACCGGACCGACTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //