Array 1 364747-367815 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEPC010000014.1 Streptococcus sanguinis strain ST01 ss_st01.contig.14_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 364747 36 100.0 29 .................................... AAATTTTACAAAATTTATATTTACGCTGG 364812 36 100.0 30 .................................... AAGAACGGGAAAGAGCCTAACAATCCATCC 364878 36 100.0 30 .................................... TCTTGGTCGAGGTTGTCGCTACGGCAGCGG 364944 36 100.0 30 .................................... GCGCCAGCATGTTTTGACAAGGAGGAACCA 365010 36 100.0 30 .................................... AGAGTCGAAAAGCATAGCTTTTTAATTTCC 365076 36 100.0 30 .................................... GTGCTAGAGGTTTTACAGCTTTTGGTGCGT 365142 36 100.0 30 .................................... CTAGGGAAGCGTTGAGTATTCTGTCTGATA 365208 36 100.0 30 .................................... AATCCTCGGGCACATCAGAACGCAACTTAC 365274 36 100.0 30 .................................... TTTTCTTCTAAACTAAATTCAAGTTCTAAT 365340 36 100.0 30 .................................... AGAAAGGCCTCTTATAAGACTAAGAAAATG 365406 36 100.0 30 .................................... AGCGGTTCATTTTTAGGGGCATTGTTGTCA 365472 36 100.0 30 .................................... CTTTCAGGCGAGACACTTTTTCCGCAATGT 365538 36 100.0 30 .................................... ATACATTTTCAAATATTCTCGGTCAAATTC 365604 36 100.0 30 .................................... GTTTATCGCAGAGCCAAAAGCGTGTGATAT 365670 36 100.0 30 .................................... TTAAACGAGCCAAAATCTCGATCAAGGTAC 365736 36 100.0 30 .................................... AATTTTCAATATATGTCCATTTCCTTTCAT 365802 36 100.0 30 .................................... GTAATTCCCGCACGAACGATAAGAATCGTT 365868 36 100.0 30 .................................... GTTGGGAAGATATAGCAGACTATGTACCTT 365934 36 100.0 30 .................................... CCTTAGAATTATCCACCGATTACAATTTTA 366000 36 100.0 30 .................................... AAGTCCGCTTGTGGATCTGCCTTTAACCAT 366066 36 100.0 30 .................................... ATTATACACCAAGTTTACTTGTTTTGTTTA 366132 36 100.0 30 .................................... TTACTTACAAGTTAAGTATAACATATTACA 366198 36 100.0 30 .................................... TGGACTCTAGATAAAATGATGGCAAGTGCG 366264 36 100.0 30 .................................... CGATGCCAGACCTTACTGTACTCCGTTTCT 366330 36 100.0 30 .................................... CTTTAAACATTTAAAGATCAACGAAGAAGA 366396 36 100.0 30 .................................... ATGGATATTCGAACCTACCTCAATCAAGGT 366462 36 100.0 30 .................................... GCAAAAATGCTAGCCTATGCCGTGTTAATC 366528 36 100.0 30 .................................... CTAATCCGGAAATTAAAGTCCATGGATTTG 366594 36 100.0 30 .................................... TTGAGATGGATCATTTGAGAAATCTCCCTT 366660 36 100.0 30 .................................... GATGTTTAATGGAAAATAAGAAAAGATACA 366726 36 100.0 30 .................................... ATTGCCGTTGTAAGTTATAATTTATTTGAA 366792 36 100.0 30 .................................... AAATTCCTTCAAACTATGTCCGTGATTCTG 366858 36 100.0 30 .................................... ATAAGGATAAGGTTAAACATCTTTCTGAAG 366924 36 100.0 30 .................................... CAATAAGCATTGCTTTAAACTCAGCTTCTT 366990 36 100.0 30 .................................... AAATTAAACCAAAGGTTGATAATATTAATC 367056 36 100.0 30 .................................... GATTGGGATGTCGGCTAGGACTAGTTCCTT 367122 36 100.0 30 .................................... TTCGAATATGCAATTCTCTTGCCCTTTTCA 367188 36 100.0 30 .................................... GGTACATTTCTATGGCTGAGGGAGCTGCAG 367254 36 100.0 30 .................................... AAAAAACGTGGAGCGAGTTGGAACATGCCT 367320 36 100.0 29 .................................... TCTATCATCAGGATTTTCCGCATTAGCAC 367385 36 100.0 30 .................................... CTTCCATTCCAAGACGGAAACCGCCGATAC 367451 36 100.0 30 .................................... TCCAAATGTAAGCCAGTCATAGGCTGGAAG 367517 36 100.0 30 .................................... AAACAAACACACCTGAAACAGTTGCGCAAA 367583 36 100.0 30 .................................... TTTTGACGGTTTGCGTTTGTGTTGGTATGT 367649 36 100.0 30 .................................... TGAGAGTTATTTTGCCCTCTTGTCTCTGCT 367715 36 100.0 29 .................................... CTAATAACGTTCCCTTGACTGTGGGGCTG 367780 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 47 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGATAGTTATTTAAACTATAGTGAGTTTATAAATTGTTGTAAAAAGATGAATGAGATGACTATGGATTTACAAAATTTTCACGTTATTAACTTTCTATCAAGCGAGGGATATATTTATATAAATAAAGAAAACATAATGAATGTTAATATTGTTGCGGATTTAGTAGAACACTTTTACGAATTTTCATTTATGTATGAAAGATTTTTTGGTCAATATCCTGCTAATGAGGTACCGGATGAAAAGGTTTTTTTAGAGTCGTTACAAAAAGTTTCATCATATCTTTTTAGTAAGGATATTGCTCATATTAGTTTATCTATTCCAGATATAGTTACTTTGAAAATTATAAATCATTTGTACCAATACGATAAAAAGCCAAGAATTTGTTCTACGATGTCTAATCCGCTATTAATTAAGTTTTTGAATACCTATAATTGACAGGAATCGCAATAGGCATTATAATCAATATATGAGTATAAAAATCACAATTTTTCCATTTGAG # Right flank : CAGCTTACTATAGACCAGATAGCGTTGTTCTGTTTTTATTATAGTTTAGGATAGAGGGGAATCTGTAATGTTTTATCATAAAAAGGGCTGAGTAAATCAGTCCTTTTGTTCTCTATTTCCCCAAGCAGAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCGGCGTCACCAGTGATTTCGCCGAGGATTTCCCAAGTGCGAGTCATATCGACTTGGAGAAGATCTACCGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAGGCTTTCTAGGGCTTTTTCAATTAAGGAGATATGGCGGGCGTTGGATAGGTAGGTGGCGTCTTGCTCGACGATACCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATTGATATTTTGATTGTGGAGGACAGAAATCTTGATGACATCAGTTGGCAGCTGATCCAGCTCAATCTTTTCCTCAAGGTCAGTCTTGTTAAGCAGGACGATACGATTACTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //