Array 1 306777-300829 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYZU01000001.1 Mycoplasma sp. ATU-Cv-508 Cv_Mycoplasma_PacBio_F, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 306776 36 100.0 30 .................................... GGCTGTCGCCCAATATTGAAACTTTGAAAT 306710 36 100.0 30 .................................... TTTTATCCTTTCTTTTTAATAATAAAGTCA 306644 36 100.0 30 .................................... ACGCCCAAAACTTCTTATCAGGTCCCTCAG 306578 36 100.0 30 .................................... AGCCAAAGTACCAGCAATTATCGCTTTGCG 306512 35 97.2 31 ........-........................... TAACTATTTGAGATACAGAAGACGCCAAATA 306446 36 100.0 30 .................................... CTATGGTCAGCCTGTGGCCGAGCCGTTTGA 306380 36 100.0 30 .................................... TATTAAGTATGACATTAAGTGGAGGAGTCA 306314 36 100.0 29 .................................... CCGAAATTAACAAACAATGATTGATTTGG 306249 36 100.0 30 .................................... TTTTACTAAATTAATCCCTTGCATAAACCC 306183 35 97.2 30 ........-........................... AATTTTGTTTTTTAGTAGAGTAGCCGGCGA 306118 36 100.0 29 .................................... AAAAAGCAGTTAAGATAGACCCCGATATG 306053 36 100.0 30 .................................... TAGTTTTATTTCCGACGATGATAAGTCATA 305987 35 97.2 30 ........-........................... CGCTTTTGAGATAGCCTGGGGAACGCTTCA 305922 36 100.0 30 .................................... TTGTCAGCGAGAATGGGTGCAACCACTAAT 305856 36 100.0 30 .................................... TTGATGTCTCGTACTATACCAGTTGCTGTC 305790 36 100.0 29 .................................... AATATAAAAAAGGGGCAACCTAACGGTCA 305725 36 100.0 30 .................................... TTGATTAATACTCATTTTTTTTCCTTTCGT 305659 36 100.0 29 .................................... CATTTTTCATCAACTGAACGACTAGTTCG 305594 35 97.2 30 ........-........................... TTATGAGAAGGGAAGTTGAAGAACACGCCA 305529 36 100.0 30 .................................... AATTTTGTTTTTTAGTAGAGTAGCCGGCGA 305463 36 100.0 30 .................................... TAACACAGTTAATGAATTAGACGTGGAACG 305397 36 100.0 30 .................................... TTTTCCATCTCGTAATACATATCCCCCTTT 305331 36 100.0 30 .................................... AATGCCAGTGGGGCATAGTCCCCAATGTAA 305265 36 100.0 30 .................................... CATCAGTCGTTGACCTTTCGCAACCCATCT 305199 36 100.0 30 .................................... GCTTAGCAGTGCCAAGACCGGATCAAGGTC 305133 35 97.2 30 ........-........................... AGCGACAGCGGTAAAATAAACGCTGTTTAG 305068 36 100.0 30 .................................... AAGTTGCAGAACATATAAATAAGGAGTATG 305002 36 100.0 30 .................................... GCTTTTTTCATCAACTGAACGGCTAGTTCA 304936 36 100.0 30 .................................... TGGCGTTGTTCGGCACTTTCAAGTCTTCCT 304870 36 100.0 30 .................................... TGTGCCAAATCACGCCCCAATCAATCCCGG 304804 36 100.0 30 .................................... ACTTTTTATCCCGGCAATCCGACTCCCCGA 304738 36 100.0 30 .................................... CACTTTTAAGGTAGCCTGGGCTGTGCTTTA 304672 35 91.7 27 ........-.........................CT GTAGGGCTTAGAATTAGCCCATACGCA 304610 36 100.0 30 .................................... ATAGAAGCAATGATCAACCGCAAGCGACAG 304544 36 100.0 30 .................................... TTTTAAAGTTGAAGTCTCAAAATAACCTAT 304478 35 97.2 30 ........-........................... AAATGATATAATTATCAAAGGTAAATACGG 304413 36 100.0 30 .................................... TGCTCGTCAGTTGGCTTAGCCTTAAATCCG 304347 35 97.2 29 ........-........................... GCGGGTTAGCACTCACGGCGAAGGGATAG 304283 36 100.0 30 .................................... TTTTTTGCGGCGTCCCACACTTTAACTTGT 304217 36 100.0 30 .................................... TTGAATCAAATTTTCCATCAACTAACTCGG 304151 36 100.0 30 .................................... CGTTGAAACAAATCACAACTATTGGCGCTT 304085 36 100.0 30 .................................... TCCTAACCACTAATGATTGGTCCAAAGATG 304019 36 100.0 30 .................................... TTTACGTCGTGCGTGAATTTTACACGCGGG 303953 36 100.0 30 .................................... TTATGTGGAATACGGAGTTAAAAGTGGTGG 303887 36 100.0 30 .................................... TAGTGTCATAACATGCCCCAGTCTAAGGAT 303821 36 100.0 30 .................................... AAAACAATTAATAAGACAATTGCTGCTAAG 303755 36 100.0 30 .................................... TGGCGTTGTTCGGCACTTTCAAGTCGTCCT 303689 36 100.0 30 .................................... AAGGTAAGCGGATTAGTTGAAAAGAAGTGG 303623 35 97.2 30 ........-........................... TAAGGGTAAAATTTATCAATATAATCATGA 303558 35 97.2 30 ........-........................... TTTTTAGCCATTTTGCTCCTTTTTTCTTTG 303493 35 97.2 30 ........-........................... GGGTCGCCGCTAGCATCCATTGCGGCACCA 303428 36 100.0 30 .................................... AATGGTAATACGACCACTACCCGCTGGTCA 303362 36 100.0 30 .................................... ACCAATCGACAAATAGTTTGGCGGCATTTT 303296 36 100.0 30 .................................... ATTTTGGAGACTTGGCGCTTAGGTTGTCAA 303230 36 100.0 30 .................................... TCTTCAAAGTATGTGACCACAAGACGCCGA 303164 36 100.0 30 .................................... ACAAATGAAACGGTTTCTTTTAAATCATCA 303098 36 100.0 30 .................................... GAAAAAAATTTTTGCGATTTTGAAAATTTT 303032 36 100.0 29 .................................... CGAATGACAACGAGTTTGGGAGAACTTGA 302967 36 100.0 30 .................................... TTTTTTGTTCCACACCCCAACTGTCAAATG 302901 35 97.2 29 ........-........................... CTGACTATGAAATTAAAGAGTGGCGTCCC 302837 36 100.0 30 .................................... GCACGTGTGTAGAACTCGCGTACGACATAT 302771 36 100.0 30 .................................... AAACAAATGGCAGACGCCGATCCCGCTCGT 302705 36 100.0 30 .................................... TTCATGGCATCGATGCATGCATTCTGCTAT 302639 36 100.0 30 .................................... TTATGTACTCCAATTTCAGCATTGTTTCAA 302573 35 97.2 30 ........-........................... CAATTAACATTTGAACGCCATTTAATGCTG 302508 36 100.0 30 .................................... GCATCGTGCGGTCATATACTTCATTTGCCT 302442 35 97.2 30 ........-........................... TACGTAGAACTGCTGGCACGTTTGCGTAAG 302377 35 97.2 30 ........-........................... AAATAGAAATATAGGCATCACCGCCAACCT 302312 36 100.0 30 .................................... AGTGGTGGCGGAGACACCTTGATACCGCAA 302246 36 100.0 30 .................................... CTTTGGTGATGTTTAAACATTATGACCATG 302180 36 100.0 30 .................................... ACCGTTATAAAAAAGGTATTTACGTGTTGC 302114 36 100.0 29 .................................... GTAATGCCAAGCATGCCCCAATCTATACA 302049 36 100.0 30 .................................... CTAACATCATCGCATCTGTTTAAACGGGCG 301983 36 100.0 30 .................................... ACCCCAAACAACAAAAAAGGAGTGTTGACA 301917 35 97.2 30 ........-........................... AATTATGCCGCTCTTGACTGAGTTTCAGTA 301852 36 100.0 30 .................................... TAAAATCAGTGGCAGTTGGCGTTTTTCCTA 301786 36 100.0 30 .................................... TTTTATTTCGCTGACTGGAGACCATTTTTC 301720 36 100.0 32 .................................... CTTGAGGTTCCAATCAATTAAATTTTTTCATC 301652 36 100.0 30 .................................... CAAAGACTTCAATTTACCTCGCGGATTTTA 301586 36 100.0 29 .................................... CCAGAATCAAAATCAAATCAAGGCAACCG 301521 36 100.0 30 .................................... CTAACTATGTAAACTCCGAAATGGAACCAG 301455 36 100.0 30 .................................... CGCCAAGTCACCAAAGTTTTTTACTCGGCA 301389 35 97.2 30 ........-........................... AAAAAGATCATTTATTAAATCTTTCTTCTA 301324 36 100.0 30 .................................... AGTCTCTCACTCATGCTAATTCTTCGCGAG 301258 36 100.0 30 .................................... TTGGCAACTGCTAAAACGCTACCCCACGGC 301192 36 100.0 30 .................................... CTCGCAGCATCGCGTCAAATAAAAAGTTGT 301126 35 97.2 30 ........-........................... GATCCGTTAATTGAGCTTTTTTTCATTTTA 301061 36 100.0 30 .................................... TGGGTTATACTCAATCGTAACTTCGGGGGT 300995 36 100.0 29 .................................... GAAAAAGCCCTTTTGTTTTAGTAAGGATA 300930 36 100.0 30 .................................... AAAAGACTTCAATTTACCACGCGGATTTTA 300864 36 77.8 0 ...................T...G.A.A.AG..G.G | ========== ====== ====== ====== ==================================== ================================ ================== 91 36 99.1 30 ATTTTGGGGCAGTATAATCCTTATGTATCCTTAAAC # Left flank : GTTTTGCGCAAGAGCAGCGGAGAAACCGATTCTACTTCTTTTTACGAATCAATGAAGTGAACCGAAATTCATTTATATCGTGATGATGAAGGCAAATACCAGTTAGTGCCAATCAATGCGTTGGTCGCTAAATACAAAAACGACGGTTCTTATCAATTGAAAGAAGAATACTGAAAAAAAATCAAGGGAAGAGGCATAAATAGCGATACAGAGTATTTTGTCATACACAAAGGAGATATTATCGTTGACAAAGATGATAATATCTACAGAATATGTGGTTGTGTTCCCCGAGCTAATAAATTAGAACTTAAGAGATTGGATGGAAAGCCTAACCTGGATTCTAAAGGAAAAGAAATGCGAGATTTTTGAACCTTAAACACTAAACTTGTAAATTGCAAAATGGTGAATCTAGATTATCTAGGTAACGTCAAAAAATTAAACACATTTTCCGACCATTAAAACTCTTGGTGTAAAAAAATTAAAAAATTTTTAAATTTGAC # Right flank : AAAGATCAAACCGCAAAATTCTCCACAAATAAAAAACACTCAGAGATTAGCGCTTTTATAGCGCGTAGTCCCGAGTGTTTTTTAGCTATATAGGAATCGTGTACGATTTCACTTTCACAGATAATCGCACACATTAGTTTTTGTTGACTACATTCTTATCTTAGAAAATGCTATTTTCAAGTTCAAATAAGACCTTTTAGATTTGGCAGATAAATAGTTCAAGAACTATGATTTCATGAACCTAACTACTTGTTCCAATTGGGATTTTTCTGATTAGATCTGTTGTCTCTATTGTCTTTATGATCTTTGCTGTTAGGATTGTGGACATTAGAACGTTGATCGTTAGAGCTTCTGTGTTTGCTTTCAATGATTTTCATTTTTACACCTCCTCTCCTATAATGTTAATACTATTGAACAAATTCTCAAAAGAGCAATTATATGATCTATCACCGTTGCTGTCACGGCCGCGGTCTCTTCCGCAATAGCAAATGCCACTCGCC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTGGGGCAGTATAATCCTTATGTATCCTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //