Array 1 490017-490909 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP018189.1 Streptococcus salivarius strain ICDC3 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    490017	    36	 100.0	    30	....................................	ACCAGCGGTAGTGATCTTAGCTTGTTCCGC	
    490083	    36	 100.0	    29	....................................	GCCGTAGATGGCACGTTCGATGGTCAACG 	
    490148	    36	 100.0	    30	....................................	ATGGTGGCAGTTTACTTCTACTGGTACTGC	
    490214	    36	 100.0	    30	....................................	ATTATCCTAGCCTTTTTGTGTATTTGAAAA	
    490280	    36	 100.0	    30	....................................	AGTATTTGGTGGATATGCACTTACAGGAGC	
    490346	    36	 100.0	    30	....................................	AGCTATGTTAGTAAGTCTTTACGGTAAGTT	
    490412	    36	 100.0	    30	....................................	TGCACCAAGCATTGATAAACCAGAATGGTC	
    490478	    36	 100.0	    30	....................................	TAACTGTCTTGTGGTAGCGGATATTGTTTT	
    490544	    36	 100.0	    30	....................................	AAAATGGCAACGTGACTTACGGGCGTGGCA	
    490610	    36	 100.0	    30	....................................	CCTCTGTAAGAGGTTTACCGTCGAACATCA	
    490676	    36	 100.0	    30	....................................	TATTAAACGCTTCAATCGTCGAGGAGCTGA	
    490742	    36	 100.0	    30	....................................	GTGAAGTTGACCCAAAAGACTAAAGTCTAA	
    490808	    36	 100.0	    30	....................................	TGAACTAATTAAGACGATTGGAGAACACAA	
    490874	    36	  80.6	     0	............CC...............T..CTCT	|                             	
==========	======	======	======	====================================	==============================	==================
        14	    36	  98.6	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   AAGAGAATTTTGGTGTTCGTCAATAGTTTGTCGTATTTTTCTAATGATGAAATTTATCAAATCTTGGAATATACAAAGTTATTACAAGCTGATGTATTATTTTTGGAACCTAGAAAGATTAAAGGTATTCAACAATTTATTTTGGATAAGGATTACATTTTGATGCCTTACAATAACTAGTAATTTGGTAATAAGTATAGATAGTCTTGAGTTATTTCAAGACTATCTTTTAGTATTTAGTAGTTTCTACATGAAGTTGAGTGGAAGAATCATTTTGTTAGAGAGTAGGTTATAAGCTATCTGATAGGTGAGAAGGTAAGTTGATTGGAAAAAGATTTCTAAAATTTTTTCGATATAGCGACAGCTCTATTTGTTAAAACGTTGTTATATAAGGCTTTTTAAGGTATAATAAACATAAAAATGAAATCATTTTGAAGCTGAAGTCAGGCTGAGATGAATAGCGCGATTACGAAATCTGGTAGAGAAAAATGACCTACGAG
# Right flank :  TCTCTTTGTAATAATTTTTGGTTGACTTATCCTCAAACACATCCTATCATAGAGGAGTCTAGTATTGAAATGGGGGAAGAGACATGTTATACGAATATCCAGCGATTTTTCACACGATTGAGGAAGGTTATCAAATTAGTTTTCCTGACTTTGGTCGTAGCATTAGGGCAGATTCTTTGCCTCTTGCTATGACGAAAGCATCTGTGTTTTTATCACATATTATTAAAGGGTATGGAGATAAGCCTTTACCAGAGCCGACTGCGGTAAGCAGTATTCCTAATGAGGAAGAACTCGTTGTTTTGATTCAAACAGAGCTTGATTAAGACTAAAAAACTCTCGGAAGATTAATTCCCGAGAGTTTTAGGTTTTATTGGCTACATAGACGCCCAGGACGACTAAAATGCCTGCAAAAATTTGTAGTTGCGAGAAGGGTTCTCCTAAGACGACAACAGCAGCTAGAATTGAGATAATGGTCGAAATCCCAATAAAGGATGCTGTTC

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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