Array 1 58748-60636 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045304.1 Legionella longbeachae strain B1445CHC plasmid pB1445CHC_73K, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 58748 28 100.0 32 ............................ TGGCGGAAGTTTTTGTATAATGGCTCCCGACA 58808 28 100.0 32 ............................ AGGAATGAATTGTACTACCGTTTAAATGTGTA 58868 28 100.0 32 ............................ ATTATATACGTCACTTATATCATAGATACCTA 58928 28 100.0 32 ............................ TGCGTACTCATTCGACTGCTTGTGTTTGTGGG 58988 28 100.0 32 ............................ AGTTGTTATTGCATTTAAAGCACTAACCCCAT 59048 28 100.0 32 ............................ ATTTAAAGATCTCGGAGAATTATACTCCGACA 59108 28 100.0 32 ............................ TCCGGCAAGATTGCGCGCACCGGTTGTTATAG 59168 28 100.0 32 ............................ GTCGGAATCTAGCATTACTTTAACAGCAATAA 59228 28 100.0 32 ............................ ATCAATATAAACATTACACCTAGGCCACAATA 59288 28 100.0 32 ............................ TTTGTTATTGCTCATGAGTTCACAATGATGCC 59348 28 100.0 32 ............................ AGTTGCAACTAAACCTAGTTCGCGATCACCTT 59408 28 100.0 32 ............................ TTCAGCGATGGTACAAACTGGCTAAGAGTAAC 59468 28 100.0 32 ............................ AGCAAGAAAATTATTAGCTGATATATTACCGT 59528 28 100.0 32 ............................ TGGTGGTGAGTTACAAGTAAAATTACCTAAAA 59588 28 100.0 32 ............................ AGTTTCTTATTATATGCATACAACTGGTAATT 59648 28 100.0 32 ............................ ACTGTAAAACCCTGCTTGCCATACTGATGTGA 59708 28 100.0 32 ............................ ACACTACGATCTATGAATGCTCTACAATAAGT 59768 28 100.0 32 ............................ ATTCATATCCCCTACATATGCCTCTGCTGCAT 59828 28 100.0 32 ............................ TTCATATATTTCCCGCCCTGCGGAATCTTTTA 59888 28 100.0 32 ............................ TATACATACAAGTGAAAGAGGTAGAAGATTAA 59948 28 100.0 32 ............................ AGACGGTAATAGATATAACAGTACTTATGATG 60008 28 100.0 32 ............................ CAAGCAAAATATATTTTCTCTTTTAAAGAGTA 60068 28 100.0 32 ............................ GTGTGTTAAATACCTAAAAGAAAAAATAGAAA 60128 28 100.0 32 ............................ AATAGAGTTTATAAATATTTTAACAAAATCTT 60188 28 100.0 33 ............................ TTTATAATTAATACAATTTTGAGACTTTCCATT 60249 28 100.0 32 ............................ AGGTATGGAACGCGCCGCTAAAAACCAACCAG 60309 28 100.0 32 ............................ GAAAGCATCGCCTTTTTTACCTGCTTGATAGC 60369 28 100.0 32 ............................ TCCAGGATCTTTACCACCCATGCCGGTTGAAA 60429 28 100.0 32 ............................ TCATCTATTATTCCTACTGTATTAGCTAGTAT 60489 28 100.0 32 ............................ ATTTATTACTGCAATGCATTGCATTGATTGCT 60549 28 100.0 32 ............................ GTTAGTGTCAACAACATCATAAGTACTGTTAT 60609 28 96.4 0 ...........C................ | ========== ====== ====== ====== ============================ ================================= ================== 32 28 99.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CCACAGTTTGGGCATTGGTTCTTTGTGAGAAGGACAAGTGGAGCAGCCCATTTATTTATACCCCTTATTCATAGTTTTCTTCAGAGCCGTAATGTTAAAGCGTCATTGTTACCTAAAAATAAAGGTTTTTAAAGAATTCATCATAGATATTGAATAAAACAATAAAACTATTTGTTCTATTATAGGTAATTTGAAAACTTAATTACTAATGATGAAAAAAATTGGTTATCTATCTGTATTCAATGAAAATACTTGAACAACTTCACAGTTTACAATCCTATAAAATGAAACATACCGAATTATAGATATTAAAAGACCAATATAGTCCTTAAGTCGGTTGGCTGTTCCATTGCTCCCCAAACCCGAATGACCAATATTTTTAGCTCTTTAAAAATTAAATATAAATTCAAATGCTTAGAAAACAACTGAAATAGGTTGGTTAGTTTGATTTTTTTCATGTAACTTTCTGTTATAACTATTTCTTTTGGGTTTATATTACT # Right flank : AAGCATTTACGGCTTCGTTGTAAATAAGATGGAGAACCCAAAAATCTGAATTTCATGCATAGCTCAGTAATATATCCAAAATTGTTCATTAATAAATGATATCTCAGTCCGATTACCATAGATCCATATATTGAACTGTCCTTTTTTAAACATACGCATGATTTCAAAACCCCTGATGGTTGCATAGGCTGTTTTCATGGATTGACATCCCCTGACTGGATTGATGAGGCTCTTGAGTTTTCCATGGTCTGCTTCGAGTCGGTTATTTCGGTATTTTATTTGCAGATGACTGACATGGAAACACAGACCTCCTACCTGTTTCAGCTCTTTAATAGCCTGACTATAGGCTGGATTTTTATAGGTATTGATTACACTGACATCACAGGTTGAGTTAATCCTGATGAGTAGAATATGCATCATTGATGATGACTTGTTGGGGTCAACACATAGACCTGCTCTAAACATTGATGCAATCCTTTAGAACTTAAATGAAGTGGTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //