Array 1 410119-407098 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMIV01000002.1 Paracoccus acridae strain CGMCC 1.15419 sequence002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 410118 32 100.0 34 ................................ ACCTGATTGATGATCGCCTTGATTTCCGTCTGAG 410052 32 100.0 33 ................................ GCCGCTGCCGGTAGGCGACCGCTCAACGGCCAA 409987 32 100.0 33 ................................ TATGAACCGGCCGTCACTACTGCATTTGGACCG 409922 32 100.0 35 ................................ CATGATCTCGTAGTTCTGCTTTGGGTCCAAGTGGA 409855 32 100.0 34 ................................ ATTGAGTGCGACAGATGCGGGGAATGCAGCCCTT 409789 32 100.0 35 ................................ TGGTGCGGGACCGCAGCTTCGCGAACTGCCGGGAA 409722 32 100.0 34 ................................ GACGTTGGTGCGCTCCTTGCCGTCCTGGCCGATG 409656 32 100.0 34 ................................ CATCTTGCAGTTTCTGCACAGAAAGGAACGCGCC 409590 32 100.0 35 ................................ GGCATGAAAATGTCAAGAAAGAGCCGCCGAAACTT 409523 32 100.0 34 ................................ CTGATCGGCGTGCCGGTCTCCAGCCTCACCGGCG 409457 32 100.0 34 ................................ CTCAAAAACCAGACGCGAAAGACCCTGAGCGCCC 409391 32 100.0 36 ................................ TCGCGGAACATCTTCTCGATGAACACGTCCGGGGCC 409323 32 100.0 34 ................................ TACGACGCGCCCTTCTTTGACGACACGCCGCGCG 409257 32 100.0 34 ................................ ATGCTGATGTCCTCCTGGAGGGCGCACATCTTGA 409191 32 96.9 35 ...........................A.... TGGCCGAGGCACATGGCTATGACGCCGATGAGGCT 409124 32 100.0 36 ................................ TTGGCAGCATCGAGCGCCGCCACCAGCGCATTGACC 409056 32 100.0 34 ................................ CGCGCTGATCTGATAGGCGCTGCTGATCGGGCTG 408990 32 100.0 35 ................................ CTCGGTCGTCACGCTGGACGGACCGTGGAAGCATC 408923 32 100.0 34 ................................ GCCCGATAGCCCGGATTATGCCGAGTGCAATGTT 408857 32 100.0 35 ................................ CAAGTCTTTCAGCGGCAATCGAACGGCTACAACAA 408790 32 100.0 34 ................................ CCCGTTTCAGGGTCGTAGGTCAGTAATTGACGGA 408724 32 100.0 34 ................................ ACCTACGGGACCTTCGGCGAAGCGTCGCAGCAGT 408658 32 100.0 34 ................................ CCGTCCACGGGTATCGTGATGAACCCTGCGGATT 408592 32 100.0 34 ................................ TGCGCGGGGTCAATGTCGAGGTCTCTGCCAAACA 408526 32 100.0 35 ................................ AGCGGCACGGTGACTGCATCCAGCACATACCGCTC 408459 32 100.0 36 ................................ ACCGTCACCCTTTGGCCCAATGACCGGGGCATCGAG 408391 32 100.0 35 ................................ ATGTGGGATTTCCCTTATGGATACTCAGCCACGGC 408324 32 100.0 36 ................................ GATCAGTGCATGGTGGCACTGGTTCATAAAGATGGC 408256 32 100.0 35 ................................ AGTGGGCCGACCGGATGATTTCGCAAGTCTTTGAC 408189 32 100.0 33 ................................ CGCAAGGCGCCTTGATTTGAAAGTCTGACCGAT 408124 32 96.9 34 ...................A............ CCGCCTCAGCCGAGGCCGCGACCGCCGCGATCGC 408058 32 100.0 35 ................................ CCCGTGTGGCCTCCTCTCAATACTACGACCGCGCG 407991 32 100.0 36 ................................ CATGATCCCGTCCACGCTGACCTCTACGTCCTGATC 407923 32 100.0 34 ................................ AATTCCCTGTCAGGGGCAAACAGATCACGCATCA 407857 32 100.0 34 ................................ TAGATCGTCAGCTTTTCGCCGCCACTTGCGGCAT 407791 32 100.0 33 ................................ TGCCCGGCAGTCGCCCGGATGCGCCCCCGCCAC 407726 32 100.0 34 ................................ CATGTAAACCCCCCGCGCAACCTCGGCCGGATAG 407660 32 100.0 35 ................................ CGGTCCTGGACCTGGACGCGGCGGCTTGCCGAGGA 407593 32 100.0 33 ................................ CATCTCTGGATGATGTGGCGCAGCCCCCAGGCC 407528 32 100.0 33 ................................ GGTGCGCCTCACGCTCAACGCAGGATATTCGTA 407463 32 100.0 34 ................................ TACCTGTCTTTCGGCAACCGTGACGTGACCCTGG 407397 32 93.8 35 ....T..................A........ AATCGTGGCCGGATCATCCAGCCACGGCTTGAAGC 407330 32 100.0 34 ................................ ACCATCACGCGCGTGGATCATGTTTATTCTCCGC 407264 32 100.0 35 ................................ AGTGTCCTGCCGGGCGCGGAAAGGTCGTGGCGTGT 407197 32 96.9 36 ..............................G. AACGCCGCTATCTCACCGAGAAGTCCACCCGGCAGG 407129 32 96.9 0 ....T........................... | ========== ====== ====== ====== ================================ ==================================== ================== 46 32 99.6 34 GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC # Left flank : TATCCCCCTTGGTTCTGGACCTGAGATGCTGGTTCTGGTCACCTATGACGTGAACACAATGGAAGACGGAGGCAAGAAACGCCTGCGTCAGGTCGCCCGCGCATGCGAGGATTACGGCCAGCGCGTGCAGTTCTCGGTCTTCGAAATCGAGGTCGATCCCGCACAGTGGACGAGGCTCAAGGCACGGCTTGAGGCCATCATCCAACCGGCGCATGATAGCCTTCGCTACTATTATCTCGGCGCGAACTGGTCTCGCCGCGTGGAACATGTTGGCGCCAAACCCGCCACCGATCTAAACGGTCCTTTGATCGTTTGAATCAGCCTTGCGAACCCCAAGCGTGCTTGTTTTCCGATGCAGGTTCGCACCCGCTGCAGCTTTTTGAAATTGTTGATTTGTAAGCTGTGGGGTTTGCCGGCGCTCAAAAAGGCGGCTGGTCGGCCCTGTGTTCGCAATTGGCAGGGGATTTTATTATACAATCAAATTGCTTAAGTCCTTTACA # Right flank : CTGCGATTGCTTGGTCTTGTCGTAAGCGTCCGCTCTGACCGCTACCCGTTCCAGTGCCATGGCAGCAGCTCATCGACCTTGGTGATCTTGTAATCCGGGATGCGCGCAAGGGTGTCGGCGAGCCAAGCCTGTGGGTCGACGCCATTTAGCTTGGCCGTTGCAACCAGGGTGTATGCGATGGCTGCGGCCTTGCCGCCTGCCTCGGAGCCGACGAAGAGGTAGTTTTTCCTGCCGAGGGCGACGCTGCGCATGCCACGTTCGGCGGCATTGTTGTCCAACTCCAGGATGCCGTGTTCCAAGTAGGGGCGCGTTCGCTCCATGCGAGCCAGGGTATAGCGTATGGCAGACGCGAGTGGTGATTTTCCCGAGATCTTGGTCAGCTGCGCGGCCAGCCATTGTTCGAGTTCATCGAAGACCGGAGCAGCATGAGCCCGTCGGAGTTCTGCGCGACGATCTGGCGGTGACCCTCTGGCTTCCTTCTCGTCAGCGTAGAGTTGGGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.50,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //