Array 1 875940-877353 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031057.1 Acidipropionibacterium acidipropionici strain WGS7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 875940 36 100.0 41 .................................... CTCGAGAAGGCACAGGTAGCCCAGGCCAAGAAGGCACTCGG 876017 36 100.0 38 .................................... CGCACCAAGTCCCTGAGGGGCGGGATGTTCCGGCGGGA 876091 36 97.2 37 .........................G.......... GGGCCACCGTCATCGCCCGCACCGAGCAGCTCGACGC 876164 36 100.0 34 .................................... CTGTCGGCACCGGCTCGCCCGTCCTGCGCTGGTC 876234 36 100.0 35 .................................... GTCCAAGCTGATCGGCCTAGGTCATTCCACCGCCG 876305 36 100.0 35 .................................... GCCGGGTGTGATGCGGGGGGATATCCGAATCCCAC 876376 36 100.0 35 .................................... CTGGGGAGGGTGGCGCGGACGCTGGCGACCCATCC 876447 36 100.0 37 .................................... AACCCGCCTTCTGGTCCAACGGGCAGCCCAAGCTCAT 876520 36 97.2 35 ...........................A........ AGCGCGCGTCCTGATGCGCTAGGTGCAACGATCTG 876591 36 100.0 37 .................................... AACCCGCCTTCTGGTCCAACGGGCAGCCCAAGCTCAT 876664 36 97.2 35 ...........................A........ AGCGCGCGTCCTGATGCGCTAGGTGCAACGATCTG 876735 36 100.0 39 .................................... TGCCATGCGATTCCTCCCTGTCTGTGTGGTGCATTCGCC 876810 36 100.0 37 .................................... AGGACGATTCGAAGCGGTGGGAATGGTCCACCAACTA 876883 36 100.0 35 .................................... GTGACGGCGGCGGGGTTCTGTCCTGGCCGCCCGGG 876954 36 100.0 37 .................................... GGGTGATCCAGCGCAGCACGGCGGCGCGGGCCACGTC 877027 36 100.0 37 .................................... AACTCCGGTTTCATCCCGCGCATTTCATTCCATGCGA 877100 36 94.4 37 ............................AA...... CCGCGTTGACGATCCGCCGGAACGTCTCGCTCTTCTT 877173 36 97.2 38 ..........................T......... AGGGCGAGCGCACGGGTCGACTCGCTGGAGAGCTGGGT 877247 36 100.0 35 .................................... GAGCGGCGGTAGGCGTGCGGCTGAGACGGCGTGCT 877318 36 97.2 0 ........A........................... | ========== ====== ====== ====== ==================================== ========================================= ================== 20 36 99.0 37 GCCTCAACGAAGGGCTCCCCTGGAAAGGGGAGCGAT # Left flank : CCCCCTGTTCGGGGTCAGGCTGACCCTGCACACGGGCCGGGACCTGCTCACCGACCGGCAGGCCGCCCGCCTGGATGCTGTGCTCGCCGATGACGCTCACGCGCCGGTCCAGGTCACCTGGGCGGTCTACCAGGAGGTCGTGGCCGCCTACCGCGCCGAAAACCGTGCCGAGGGGCGGGCGATCATGGCCCACCTGATCGACGCGATCGCCACCAAAGTCCCCGCCGCACTGCCCGAGGTCATCACTCTCGGCCACACGTTGAAGAAACGGGCCGCCGACATCCTGGCCTACTTCGACCACCCGGGGACCTCGAACGGCCCTAGTGAGGCCATCAACGGCAGACTCGAACACCTCCGCGGTATCGCCCTGGGCTTCCGGAACCTCACCCACTACATCACCAGATCCCTCCTGGAGACCGGAGGATTCAGACCCCGACTACACCCTGGATCCTGAAGAGCCGCGATGCGCCAAGTGCGGCCAGCACGGCCGCAGCAGCCGT # Right flank : TGTCCAAGCTGATCGGCCTAGTGTCCTGAGTCGGAAGTTTCTGGTTAGTCTTGGTAGACTCTGGTCATGCCGAGTCCCAAGACTGAACCCGTGCACCTGACTGGCGAGGAACGTGCCGTCCTGAAGAGCTGGGCCCGTGGCCGCAGCCTGGAGGCCTGGCGGGCCCGCAGGGCCCGGATCATCCTGGAACTGGACGGTGGGGCCACGATCGGGCGGGTCGCCGAACTGGTGGGGTGCTCACGGACCACGGTGGGCAAGTGGCGGGCCCGTTTCGCCGCCGACCGCATCGATGGGTTGGAGGATGCGCCCCGCTCAGGGCGCCCCAGGGCAGTCTCCGACGAGCAGGTTCAGGCCCTGGTCGACCGGACCTTGCACTCCAAGCCGGCCAACGGGGACCGGGCCTGGTCGACCCGGTCGGCCGCACAGGCCGCCGGGATGAGTCAGTCGACGGTGTCGAGGGTCTGGCGGGCCTTCGGGCTGAAACCGCAGGCGATTGACTC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGGGCTCCCCTGGAAAGGGGAGCGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 878550-884002 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031057.1 Acidipropionibacterium acidipropionici strain WGS7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================== ================== 878550 36 100.0 38 .................................... GTCCCAGTGCATCCCGGCCTGGACGACCCCGCGCGGTC 878624 36 100.0 36 .................................... CGACTACGAGGTGCTCGGCGATGGCGCGGATGACGA 878696 36 100.0 37 .................................... CTCCTAGTAGTGAGGTGTGGCGGGGGGGCGTCACGTA 878769 36 100.0 35 .................................... GAGCTGGTAGTGACGGACAGGTCGTCCACGCGGAC 878840 36 100.0 37 .................................... CCAGGTCCTCACCGACTTTGACGTGCGACTCGTAGGA 878913 36 100.0 36 .................................... CGTCGACTTGGCCTTCACCGCGCAGCCGGGCAGACT 878985 36 97.2 38 ...............C.................... CTTGAGGACTGCTGGCTGCACCACAGCAACGTCAACCG 879059 36 100.0 37 .................................... CGGCATACATCGCCGAGCACGGATGCCCGCCCGGCAC 879132 36 100.0 36 .................................... ATGCCCGCAATGCAACCAGGAAGACGCCAGAGCCTC 879204 36 100.0 35 .................................... CGGTCCGCCCACCACGCCGGGGGCTCGCTCTCGAA 879275 36 100.0 37 .................................... GCGCACACCTGACCACCACGAAGACGTCGCGCCATGG 879348 36 100.0 38 .................................... TCCACGGTGCGCACCTACGCATCGACCGTCCACCGCTG 879422 36 100.0 34 .................................... CGGAAGTCATCATCGTCAGATTGACGAGCAATTG 879492 36 100.0 38 .................................... GGCCAGAACTTCGCGATGGTGCCCTACTGGCTCCTCAT 879566 36 100.0 35 .................................... TAGTGGGCGCTACCGCCCGAGCTGCTCGACTGGAA 879637 36 100.0 36 .................................... GCGCGCCCAGATGGAGGAGCCACTGGCACGCGACCT 879709 36 100.0 35 .................................... GGGAAGTCGATGGTGAACAGCCTCAATCTGGCGGC 879780 36 100.0 36 .................................... GCGCCGATGGTGCCATGATCGGCCCAAATTTGGGAT 879852 36 100.0 36 .................................... ATGAAGGAGGCGGCATGAGCGAGGCAGTGCAGGAAT 879924 36 100.0 36 .................................... ATGAAGGAGGCGGCATGAGCGAGGCAGTGCAGGAAT 879996 36 100.0 36 .................................... TTGGGCGACCGATGGCTTCGATTCCACCATCACCGT 880068 36 100.0 37 .................................... ATGGCCGGGATCCCCCGGGAAGCGCGGCGTCGTGGCC 880141 36 100.0 36 .................................... CGGCTCAGTCACAGCAGTGTCATTCGGTCCCGGCCA 880213 36 100.0 37 .................................... ACCTGGACCATTCCGCCGATGCCGATGTTGGTGACAA 880286 36 100.0 35 .................................... ATCGTCACCTTCAGGCCATCCTCCGACACGTCCGT 880357 36 100.0 39 .................................... TTCTGAAGGAAGAGCTTCAGGCATTGCACACTCCTAAGA 880432 36 100.0 35 .................................... GCCGTCAGCGACTTGCCCGAGCCATTCGCCCCGAC 880503 36 100.0 35 .................................... GTCGTAATAAGTCATACTTATTCCCCATCATCGTC 880574 36 100.0 36 .................................... TTCCTGCCCCATCAAATGAAGCGAATCAGTATCAGC 880646 36 97.2 35 ....T............................... TCCGGATGACGACGTTTCGCGCCTATTTTTAATAC 880717 36 100.0 35 .................................... GTGACGGCGTATCGGGAGGGGTACGACGGGCTAGG 880788 36 100.0 37 .................................... ATGGGGCAGGAATTGCCGGACCTTGATATTCATGATT 880861 36 100.0 36 .................................... CGCAGTACTTCGAGCCCGAATGGACCACCGTGTGGC 880933 36 100.0 35 .................................... TTCTCGGCAGCCAGGGCTGCGCGGTTGATGGCTGC 881004 36 100.0 33 .................................... TTGGCGCGGGGCCGGGCGGCTCCGCCTTGATTA 881073 36 100.0 35 .................................... CTCGCCGACCGCGAGGCCTGGCGCTGCGGAGACGC 881144 36 100.0 35 .................................... CTCGCCGACCGCGAGGCCTGGCGCTGCGGAGACGC 881215 36 100.0 35 .................................... ATCTCGATCAGGTCGTCGGCGTCATGACGGGCCAA 881286 36 100.0 37 .................................... ATGGGGCAGGAATTGCCGGACCTTGATATTCATGATT 881359 36 100.0 36 .................................... CGCAGTACTTCGAGCCCGAATGGACCACCGTGTGGC 881431 36 100.0 35 .................................... TTCTCGGCAGCCAGGGCTGCGCGGTTGATGGCTGC 881502 36 100.0 33 .................................... TTGGCGCGGGGCCGGGCGGCTCCGCCTTGATTA 881571 36 100.0 35 .................................... CTCGCCGACCGCGAGGCCTGGCGCTGCGGAGACGC 881642 36 100.0 35 .................................... CTCGCCGACCGCGAGGCCTGGCGCTGCGGAGACGC 881713 36 100.0 35 .................................... ATCTCGATCAGGTCGTCGGCGTCATGACGGGCCAA 881784 36 100.0 35 .................................... TTCTGTCCTGGCCGCCCGGCGTAGGTGGTGATGGC 881855 36 100.0 40 .................................... TTCCCGCCCTGATGGCGTACTTCACGGCGGCGCCACGAAA 881931 36 100.0 36 .................................... GTTCGGGATCTTTTAATAGGGGCGCCCGCGCACTGT 882003 36 100.0 37 .................................... CCCGCGACATGTCGATAGCCATTTCAGCCACCTTCCA 882076 36 100.0 34 .................................... GTATGTGCCGGTCTGCGCCAGAGTGGATGATGCG 882146 36 100.0 35 .................................... ATCGGGACGGGGTCGATCAGGTCGGTGCCCAGCTC 882217 36 100.0 35 .................................... TCCTCGGCGGCCTTGACCTGTGAGGAGCCGGCGGA 882288 36 100.0 35 .................................... GCCGACCGCATCGAGACCGAGTCGCAGTGGCCGAA 882359 36 100.0 35 .................................... TGCTGTGGTGGCGCCCGGGGCCTTGGTAGCGACGA 882430 36 97.2 34 ..........................T......... GTTTGGTGGCCTGTTTTCCGGACTTGGCTGTCCA 882500 36 100.0 34 .................................... CGGCGGTCACCCAGTGGGGTCCGTCGTCGGGCAG 882570 36 100.0 38 .................................... TCCGAGATCCAGCCCTCGTGCTCAGCCTGAGATGCGGC 882644 36 100.0 52 .................................... ATGACGGTCCCGTCACCACCGTCGTCTTCGAGACCGACCGCGTCGTCCCCAC 882732 36 100.0 39 .................................... CGCTGGGCATCGACTACGGCACCAACCATCCCACGGCCG 882807 36 100.0 36 .................................... GCCGAGGAGGTGTGAGGAGAGAGATGTAGGGGACTC 882879 36 100.0 38 .................................... GACACGTCCAGCCTGCCAGTCGGAACCGTGTTCGGGCT 882953 36 100.0 37 .................................... GTGCCAGGTGGCGAAATGTCATCGGCTTCGGCCACGG 883026 36 100.0 35 .................................... GCGAGAGGGTCTGTCGTGAACTCATGGCCAGAACG 883097 36 100.0 36 .................................... CACACGACAAAATATCCAAATAGTATTGTTTTTCCC 883169 36 100.0 36 .................................... AGAGCGCGACAGGGGCCGGTCGATGGGGTCAAGCCT 883241 36 100.0 38 .................................... TTGTCGCGCCACTCCCGAACGCCGGCCGCCCCGTCCTT 883315 36 100.0 35 .................................... CAGCGACGGCGGAATGGACACCTTCATGTCCTTCA 883386 36 100.0 37 .................................... CAGACGGCGCAGATGACACCATCGCCTCCGTCCTCGC 883459 36 100.0 37 .................................... GTCCTGGTCCGGGCCCTTCACCGGGGGAGTAGTGTCA 883532 36 100.0 34 .................................... TGGGATCTGGAGGGTGAGCGCCTCTATGAGACCG 883602 36 100.0 37 .................................... TGTCGCGGCCGTAACCTGAGCCTGCACGGCTGTGGTC 883675 36 100.0 35 .................................... AGCCAGCGCTCCGGTGGCAGGTACTGGCCGGTCGG 883746 36 100.0 38 .................................... TTCGACGTCACCGAGATGATGCAAACCGTCGGCTCGGG 883820 36 100.0 37 .................................... CACCCGATGGTGCCTGGCCGTCGGAGTCCTCAGCGAG 883893 36 100.0 38 .................................... CGGTCGGTGGCCCAGCGGAAGGCGCGGATGTAGGAGTC 883967 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================================== ================== 76 36 99.9 36 GCCTCAACGAAGGGCTCCCCTGGAAAGGGGAGCGAT # Left flank : GCACCACGAGTCTGTTCGCCGCCCTGGACGTCGCCTCAGGGTCGGTGATCACCGAGCACCACGCCCGCCACACCGCCGCCCAGTTCATCGGCTTCCTGGCCACGATCGACAAAGCGGTACCCAAGAATCTGGAGCTGCACCTGGTGCTGGACAACTACGCGACTCACAAGACCGCGAAGGTCCACACGTGGCTGCTGCGTCATCCCCGGTTCCACCTGCACTTCACGCCCACGTACTCGTCGTGGCTGAACCTGGTCGAGCGGTGGTTCGCCGAGTTGACCTGCCGCAAACTCCACGGATCGGCCCACCGCTCCGTCACCGAGCTCAAGGCCGACATCCAGGCCTGGATCAACCAGTGGAACACCGACCCGAAACCCTTCATCTGGACCAAGACCGCCGACGCGATCTTCGAGTCCCTGGCCGCCTACTGCACCATCCTCAACCACACCACCGACCAGCCAGAAACTTCCGACTCAGGACACTAGGTCATTCCACCGCCG # Right flank : TAGCGCTCGCGGGCAGGCCCTCCTGACAAGCCGGATAGTGCCCCGCCCGCGCGCGACCACTCTATCGCGTCCTCTCCGGAGCAGGACGCGCGGCCATCTCTACTGCAAATGAGGGTCCGACAAGGGAGGGCGCCTACGCGAGCGGTCCCCGGCAGTTGGTGGAGCCGGGGACCGCTCGCGCGACCTCAGACGATCATCGTCCCGTCCCCGACGATGTATCGGGAGTGGCCCAACCACGTCATCGCTCGTGCGTCTGCTGTCTTCGAGAGGCCAAGATCGCTGACGAGTACGGAGTCCTGGTCCCGGTCCATGATGTCCTCCAATTCGCGTTGCAGAACGAGTACATGACTCGGCGAGCAGTCCACCATGAAGACGCTGTACTGGACGCGCAGCCCGAACCGCTTCAGCGCTATCGCCATGTGGCTGCGTCGTCTGTCATCAGGTATGTCGTAGGCGACGAGGAAGCGATGGCTATCCTGCCTCATCGGACGGTCATCCCC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGGGCTCCCCTGGAAAGGGGAGCGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA //