Array 1 1284-2969 **** Predicted by CRISPRDetect 2.4 *** >NZ_OAEY01000021.1 Neisseria meningitidis strain Neisseria meningitidis isolate 22407, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1284 36 94.4 30 ........G...A....................... TTCTATTATAAAAGCTGCCTGACTTACTCG 1350 36 100.0 30 .................................... AGCATTTGGGCGGCACGGGCAAAGCCGTCA 1416 36 100.0 30 .................................... TAAACCTCTGTCGGTTGGTTTGCTTAGATT 1482 36 100.0 30 .................................... CGAATTGGAAAAGTTGCCCTACCGGTGGGG 1548 36 100.0 30 .................................... GTCGCATGGTAAAATAACCACCGCTTTACA 1614 36 100.0 30 .................................... AAACTAAAACTTTGGAAAGTTGGAAAGTTG 1680 36 100.0 30 .................................... CGGCGCATCCCCTTTAATTTAATATCACTT 1746 36 97.2 30 ............A....................... ATAGAACCTATGGCTGCTACGGCGTTGACA 1812 36 97.2 30 ............A....................... TTTTGTGGAGTTTTGTTATGAGTGAGGGCA 1878 36 100.0 30 .................................... CTGCAAGCATTTTCATCATCGGCTGTCATA 1944 36 100.0 30 .................................... CTGCAAGCATTTTCATCATCGGCTGTCGTA 2010 36 100.0 30 .................................... CTGCAAGCATTTTCATCATCGGCTGTCATA 2076 36 100.0 30 .................................... CTGCAAGCATTTTCATCATCGGCTGTCGTA 2142 36 100.0 30 .................................... GGAAGAGCGGCATCTGAATGCGGAAGAAGA 2208 36 100.0 30 .................................... CATCAAATCATCCGCCGCGATTCGATCGCA 2274 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 2340 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 2406 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 2472 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 2538 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 2604 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 2670 36 100.0 30 .................................... ACCAAGATATATCAAAATTGTAGATGAAAA 2736 36 100.0 30 .................................... TGCGGAAAGCCTCCATGCTTTGCAGCACTG 2802 36 100.0 30 .................................... AATTTGCGCCTTGCTGCATTGTGTAGTTTG 2868 36 100.0 30 .................................... TTCTTCCCGATTGAGGTTGCTAGTTTTGTC 2934 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.6 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAGCGGTTGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGCCGGAAGAAGGTGCTCATGAGAAATCTCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //