Array 1 50149-46819 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJBI01000007.1 Legionella pneumophila strain 2531STDY5467292, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 50148 28 100.0 34 ............................ ACAATGCCGACAAGGGATATGATTAGGACTGCTG 50086 28 100.0 32 ............................ TGTCCGCCGTGTCGCCGCCGCCGGAACCTAAC 50026 28 100.0 32 ............................ GCTTTACTTCTTAAAAAAGACTGGACTACGCT 49966 28 100.0 32 ............................ TCTTTCTTTGCTGCTAGTGCGTCAATAGATTT 49906 28 100.0 32 ............................ AAGGAATGATGAGAATTAGTGTTGCTGAGTGG 49846 28 100.0 32 ............................ ATAGAGACAAGAAACTTCAATCATTGCTTTAT 49786 28 100.0 32 ............................ AGAAGAATTAAAAAACGCTCTTATGCAATGTG 49726 28 100.0 32 ............................ TTGAGAGTAGCAACAGATTTAACCAAGGGTGA 49666 28 100.0 32 ............................ TTCCGCAACCGAGATCATAAACTTGGCTACGT 49606 28 100.0 32 ............................ ATTACTTGTTGTACTACTAATTACTGTATCCC 49546 28 100.0 32 ............................ TACCAGCGAACGAGCCGCCGAATGGAACGGTC 49486 28 100.0 32 ............................ TATCAGACTTAAACGAATCTCACTATAAAACA 49426 28 100.0 32 ............................ GGCGTATAATTATCTCGTATGTATTGCTCTAA 49366 28 100.0 32 ............................ AAAATTGTTTTTCTGCTCAAGAGATGGGGAAC 49306 28 100.0 32 ............................ TATGATGACGGCCTCCACGGAGAACTTGTTAT 49246 28 100.0 32 ............................ ATCACGAATGCACCCAAATTGCCTGTTAGTTA 49186 28 100.0 32 ............................ ATGTAGCGAAGGCGAGGTTCCATAATGTATAA 49126 28 100.0 32 ............................ CACTCGATGGGGTTTTCGGAGAATCATTCAGC 49066 28 100.0 32 ............................ ATTACCATTTTTTTAATCTGCTCAGATAATGG 49006 28 100.0 32 ............................ TTCCAGCTCTAATATTTTACACGCATCATATT 48946 28 100.0 32 ............................ CTGCGGGCTTGGAAATGATGAAGGCTGTTAAT 48886 28 100.0 32 ............................ TGTCTGCCGTGTCGCCGCCGCCAGAACCTAAC 48826 28 100.0 32 ............................ AATTGAACAGATAGTTGAAGAATCAGTAAAAG 48766 28 100.0 32 ............................ TTCTTAGTCCCTTTACACGCTGGGCATCTAAT 48706 28 100.0 32 ............................ TTGAGAGTTGCTCTTATGGCCTCTTTTGTAGA 48646 28 100.0 32 ............................ TAATTCATGAACGATAGGGTAGGTACTAGCAT 48586 28 100.0 32 ............................ TCATTTTGAACTGTAAATAAACCTTTCGTTAA 48526 28 100.0 32 ............................ ACTGTGGTGAGTATGGTGAGAAGTACGGAAGA 48466 28 100.0 32 ............................ ATGTGCACCTACACCGTGAATGTGCCGGTATT 48406 28 100.0 32 ............................ TCTGAGCTTGAGCAGCTTGAAAAACAAATACA 48346 28 100.0 32 ............................ AAAACGTGCTCCACCATTTAGTTGACGGGTCA 48286 28 100.0 32 ............................ GCTTGTGCCATGCGCTTAACTATTGCCCTTTC 48226 28 100.0 32 ............................ GATATGTGAAGAAGCAAAGCAAGTAATTGCTA 48166 28 100.0 32 ............................ TACTAGCCCTTAGCTATGACGAGCTCGACCAG 48106 28 100.0 32 ............................ GATTGAGATTTCAGTCGAATATATTTTACCTG 48046 28 100.0 32 ............................ TGCCCTGAACTTAGATTAATAATTACTCCATG 47986 28 100.0 32 ............................ GCTTGCACTTAGTAGGTAACGCTATCGTCAAT 47926 28 100.0 32 ............................ TATAAAATTTAATTCAGCGTCATATACCGGCG 47866 28 100.0 32 ............................ TCAGCAGCAAGACCCGGGGTCTGCAACTCAAG 47806 28 100.0 32 ............................ AAAGCCGCCGACATACGCCCTAAACTTGGTGT 47746 28 100.0 32 ............................ TATCTATTTAGATATAGCCTTCTTTCTGTAGA 47686 28 100.0 32 ............................ AGCAGTTCCAGCAGCATTTGATGGCTTATAAG 47626 28 100.0 32 ............................ ACAAGAGGCGCAACTAAACCTAACACAAATGT 47566 28 100.0 32 ............................ GGAATTTGTCGGCCGCATAGACCGCTTTTATC 47506 28 96.4 32 ...............A............ TTAACAGTTAATCTTTCAACATCAGATAAACT 47446 28 100.0 32 ............................ TTACCTCATGACTTGCTTTCTAACCTTTGCGC 47386 28 100.0 32 ............................ TGTCCGCCGTGTCACCGCCTCCGGAACCTAAC 47326 28 100.0 32 ............................ CAATTCGAACAAAACATAATCCTCAGGATTCT 47266 28 100.0 32 ............................ TGCTGGATTGTGCCCCAAAGCAAACAGAGACA 47206 28 100.0 32 ............................ AATACGTGGTTATGACCTCATCTAAAGACGTA 47146 28 100.0 32 ............................ ACATGAAGATAAAAAAACGGGCAAAAAGACCT 47086 28 100.0 32 ............................ AAATGCCGACAACGGCGCTTAAAAGGTCTTCT 47026 28 100.0 32 ............................ AGTGAAGCTATTTTTAACTGGGATAACATGAT 46966 28 100.0 32 ............................ TTTTGCCGCTCTTTGAGAGATATTGCTGTTAA 46906 28 100.0 32 ............................ GCGATATTTTTAATCAAGAATTCGAAACATAT 46846 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================== ================== 56 28 99.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTATAACTATTTTTTTAAGATTTAGAGCAGA # Right flank : TTATTATGTTAAAGGTGTTAGCACGCTACGCAGCAAGGTCGGACCAAGGCCTGACCTTGTTTTGATTAGGAAAGTCTAATCATGACTATAATCTCCATTTCTCTTTATGGAGTACAGCAACCGTTAGTCAAATCTATAAATAACCTAAACAAATAAAAATAAACTCTCTAGTTCCATGGAAATGAGTGTAATTGGATCGAAGTCAAAATAAATTGTGAAGTCTGATTACTGAGAAAATTAAATTTAGTTGATGAGTATCTATTGAATCATGAGAATAATCTAATGGTGTACGTTAATTATACACGTATGCTAAAAATTACTACCTGATGAGCTAGGATATTCTCTACCGCGTTGTTTGAATCACACTGAGTCAATCGTAAATTTATTTAGCATTACTGAGAATTATTTAATCCTCAAAAACTCAATAATAAATTTAGATATTTCACAAAATCATACGGTGAATGCTCTCCTGGTTTCGTCAGTTACTGAAATAGTGGTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //