Array 1 4038039-4036789 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056647.1 Citrobacter sp. RHBSTW-00229 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4038038 29 100.0 32 ............................. TTGATCCAGATGATTTCTGCCGAATCACTAAA 4037977 29 100.0 32 ............................. ATTCAACCGGGTGCCCGGATGGGGCGCGGGTG 4037916 29 100.0 32 ............................. ACTAAAACCTCATTTTATCGTTCACTAACAGA 4037855 29 100.0 32 ............................. GTGGGCTGTGTGGGGGCGCTTCGGCGCGCCGG 4037794 29 100.0 32 ............................. AACGGACGTTTCTACCCGTCAGCCGAAATCAA 4037733 29 100.0 32 ............................. TCACAACACAACGCGACACATATGAAATTTCC 4037672 29 100.0 32 ............................. CCCTTCCCCGCTTTTCGGCGCGGCGGAGTATC 4037611 29 100.0 32 ............................. GTGGCTACCTGCGGTTGTTCAGTTTCTACAGC 4037550 29 100.0 32 ............................. GTGGCTACCTGCGGTTGTTCAGTTTCTACAGC 4037489 29 100.0 32 ............................. GGGTGGAATGTATGGGGTGGCATCTACTACGC 4037428 29 100.0 32 ............................. TAAGTTATTTCAGTGTCATCACTCATATCATT 4037367 29 100.0 32 ............................. ACGGGGCGGCGAGGTGAGCAGTGTCGCCTGAG 4037306 29 100.0 32 ............................. CCAGATTCGGAGGAAAAGCGGATAGCGCCACC 4037245 29 100.0 33 ............................. CCTGACTGCGACGTCACGCGGCAATGTCAGCCC 4037183 29 96.6 32 ............................A GCGGGTCGGGGTTTTTAAAGTTTTTGAGAACC 4037122 29 100.0 32 ............................. TAGGGGAGCAGAGGTGTCAATTTTTCTGGCAG 4037061 29 100.0 32 ............................. TGGGATGCTAAATTTGTATTCACGCAGGATGA 4037000 29 100.0 32 ............................. GAAGCGGATCTGGCCGAGTTGCATGAGGTGCA 4036939 29 100.0 32 ............................. CGGTGATTTCCGGTAAATAATGGGGGAGGTTG 4036878 29 100.0 32 ............................. ATCGCGCCGTTACAATGTTAATCTCGATTGGT 4036817 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================= ================== 21 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCTGTCTGGCTGCTGGAAATCCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACTGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAAAGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : CTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //