Array 1 158268-154879 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJEY01000003.1 Legionella pneumophila strain 2531STDY5467457, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 158267 28 100.0 32 ............................ TAGATAATTGTTTTGCACCTGTTGCAAGTCTA 158207 28 100.0 32 ............................ GACAGACCCAAGCTACACTGCTGGTAGAGTTT 158147 28 100.0 32 ............................ AGCTTCACAATCACTAACACACATATTGTGTA 158087 28 100.0 32 ............................ TGTAACCTTGATTCTTGACTATTAAAATCCCC 158027 28 100.0 32 ............................ ATATAAGAACAATCGAAGTTCCAAATGTGGAA 157967 28 100.0 32 ............................ CCAAATTAAGCAGCATTCTTCAATACTTTTAC 157907 28 100.0 33 ............................ CCATATGATACGCAGACAATTGCATTTTTTGCT 157846 28 100.0 32 ............................ TTTTAACAATGCGTTGTTCATTGCGTTTATTC 157786 28 100.0 32 ............................ TAGTATTGTAACTGGTCAGTTTAGGTCTAATT 157726 28 100.0 32 ............................ TTTAGAGATATGTCATTTGTTTGACCATCAGA 157666 28 100.0 32 ............................ TCCAATGAAGAAGCCTAGAGAAACAGACACAT 157606 28 100.0 32 ............................ CACACCCACAATAAACGTCATTGTCTTTGTGC 157546 28 100.0 32 ............................ ATTAGTTATTATTAATCGTGATGATTACCGAG 157486 28 100.0 32 ............................ TCTGAGTTAGAGCAACTTGAAAAACAAATACA 157426 28 100.0 32 ............................ AATAAGTAAGATTTTCCACATCCTGGGCCACC 157366 28 100.0 32 ............................ ATTAAGTCAAATAAAGTTAAGAAATTTAATTT 157306 28 100.0 32 ............................ TTATGGAACGACAGCATGTAAATGGGATACAG 157246 28 100.0 32 ............................ GCTAGTTTTCCAACTTAAACTAATTCCTACTC 157186 28 100.0 32 ............................ AGCAATGAATTTGATAGGCTAGCGGTCATTTA 157126 28 100.0 32 ............................ TATTAATAATATTTTAGAAGATTGGCACATAA 157066 28 100.0 32 ............................ ATTTAAAATCAGGGTGAACCTCAAAAGGAATC 157006 28 100.0 32 ............................ CTCATGACCTTTAGCCGTAGATATAAAAAGAT 156946 28 100.0 32 ............................ TCAACGCCCTGCGCTCAACAGGATTAACCTTG 156886 28 100.0 32 ............................ GACTCCTCAACTATCTGTTCAATTGGTTTAGG 156826 28 100.0 32 ............................ ATCAGCGAGGGAAACATCAGTTCCTCCGGTTA 156766 28 100.0 32 ............................ TATAGAGTCGAATAATACTTCTCCTCAGTTTA 156706 28 100.0 32 ............................ GTGTATATGATTTAACGCTGATTTCATGGGGT 156646 28 100.0 32 ............................ TTAATAGTTGTCTGATTATCTTATAATAAAGT 156586 28 100.0 32 ............................ AGTTTCTATCAGGTATCGGCGGGTAATCATAA 156526 28 100.0 32 ............................ TTTGGACGTTTTATCCTCCACAGTATGCCAGT 156466 28 100.0 32 ............................ TACACTCATAATTGAAAGTAGTGCAAAAATAA 156406 28 100.0 32 ............................ TATGGTGACGACTTAAACGAAGCGTTAAACGC 156346 28 100.0 32 ............................ TACATGCAAAAAGGCGGTAAAGCATGGCAATA 156286 28 100.0 32 ............................ TAAAGCCGCCGGAGCTGTCACTACGTCATTCG 156226 28 100.0 32 ............................ AATAAGATGAAAAGTTGTTGACAAAATGTACT 156166 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACTATTAATC 156106 28 100.0 32 ............................ ATCTAAAAATTGTTGAACAGTTGGAATTGGCT 156046 28 100.0 32 ............................ AACATGGACTAAAATATCAAGAGGCATAGCTT 155986 28 100.0 32 ............................ AAAGAAGAACATAGCCAGCCTACTAGCCCTTA 155926 28 100.0 32 ............................ TTAACAGTTAATCTTTCAACATCAGATAAACT 155866 28 100.0 32 ............................ GTCAGTTGTTCGATAGTTATCGATTATAAAGC 155806 28 100.0 32 ............................ TATAGGCGTGAAACAGAGCGTTTATTGCAGTG 155746 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACCATTAATT 155686 28 100.0 32 ............................ TCATAATTTGGAATTGGGGTAAAATGCTCGCC 155626 28 96.4 32 T........................... AATGTCTGATGGATCGATCATACAAAGCCCAA 155566 28 100.0 32 ............................ TAATGTGCCAACAAAATACAAGTCATTGACAA 155506 28 100.0 32 ............................ GAGATATTATCTTTGAAATCCATTTACCGCAG 155446 28 100.0 32 ............................ GTTTATTCGCCAGTCTCGCACCAGTATGTATT 155386 28 100.0 32 ............................ TTGTACAATGCCATCAGCTAATACATCTGTTT 155326 28 100.0 32 ............................ AAGATGAGACAACGCAGGCCAATAAAAATCAA 155266 28 100.0 32 ............................ ATCTTCAAAATATTCATAATCATTGGATTCAA 155206 28 100.0 32 ............................ AACATGCGCACGAATTAGCCAAGTTTGCAATA 155146 28 100.0 32 ............................ GGTAAGCCTATGTCCTCGACCAGACGGTCATC 155086 28 100.0 32 ............................ AAAAGATGAGGCTACAAAGTCATTAATCAAAA 155026 28 96.4 32 .............T.............. AAATCCCCAAAATCGCATTTGAACTGTAAATT 154966 28 100.0 32 ............................ GTAGGAATATTTATATTGTATGTTGTTGATGA 154906 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 57 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : AAGCACGTACGTACAGGGTCAGATCTTGCTTTTTGCCTTTATCCATAAAAGACGACAAGCTTGGAATTACCGCTTGATAATTATTTCCCAATGCATTAATTTTCTATCAAAAGGAATTAAGCAAGTCCAGGAACAGCGATGGTAAGACCTTTGCGTATTGAGTATGCTGGTGGGCTCTATCACATCACCAGTCGAGGGAATAGAAAGGAAGCGATCTATTTATCAGATGAAGACAGAGAGAATTTTTTATCTGTTTTGGGTGATGTTTGTTTAAAATATCAGTGGTTATGCCATTCGTATTGTCTGATGACAAATCATTACCATTTACTCATTGAAACTCCGCTCGGTAATCTTTCAAAAGGAATGCGCTATCTGAATGGGGTATACACTCAGAAATTTAATAAATCACACAAGCGAATTGGGCACGTCCTGCAAGGTCGCTATAAATCTATACTGGTTGAGAAAGACAGCTATTTATTGGAGTTGTCGCGTTACATAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //