Array 1 23966-26068 **** Predicted by CRISPRDetect 2.4 *** >NZ_VYVD01000020.1 Corynebacterium amycolatum strain UMB9256 NODE_20_length_46482_cov_20.627527, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 23966 29 96.6 32 ............................A TACGCGCCACAATCGCGTCCAAGTCAGCCCAC 24027 29 100.0 32 ............................. ATTAAGCCCGTGCTCGACAGGCACGCGCCTGC 24088 29 96.6 32 ............................C ACAAGACATCGTTTCAGTGCTCGAATCTGCGA 24149 29 100.0 32 ............................. AACAGGTTGCTGGTGCCACCAACCTCAAGGAA 24210 29 100.0 32 ............................. GTACTTGAGGGGCTGATTGGCAGCGAGCCGGG 24271 29 96.6 32 ............................A ACGTCTTCTAGTCTTTGTCAGTGCGTGACCGT 24332 29 96.6 32 ............................C CGACACCGAACACCAGCGAATCCAACACGGCC 24393 29 96.6 32 ............................C ATGGGGATTCTGGAGCGCGCGGGTTGGGTTAC 24454 29 96.6 32 ............................C CAGGAGTTGGAGGTCGCGTGGCGGGAAGCGAC 24515 29 100.0 32 ............................. TCGGGTGCCCCCACTGTAATTCCAGTCTTGCC 24576 29 100.0 32 ............................. GTTGCCTCGGCTTCGCTCCACGCAGGCGGGGC 24637 29 96.6 32 ............................C GCGACGCGGCACACGACCGCTTCCAGCCAGTC 24698 29 100.0 32 ............................. CACGTGTGGCAGATCGTGAATGGGTGGTCTGC 24759 29 100.0 32 ............................. TCTGGGTCGTGGACGTGGGAACCGGCGACGGT 24820 29 96.6 32 ............................C AAAAGGGGGGCGCTCGACCCGACACCAATTCA 24881 29 100.0 32 ............................. GACGGCGCCCGCTGGGGTGGGCGTATGCAGTC 24942 29 100.0 32 ............................. AACTGGCCGTTCATCTTCGCACCCCACGACGG 25003 29 96.6 32 ............................T GCCCACGCCAGGGTTGACGCAGGCAAAAGAAA 25064 29 100.0 32 ............................. TGTTTGTCGTACACGGCCAGCCATCGATCTAC 25125 29 100.0 32 ............................. CAGGTGCGGTTGTCTCGGGCGTTGGAGGAGTT 25186 29 96.6 32 ............................C TGCCAGTTCGCGGTCTTACCAACCGCATCCGG 25247 29 96.6 32 ............................T GAGTACCGGAAGGGCTGGCTGGGCACGAAACC 25308 29 96.6 32 ............................T CGTACTTCTCGCCCAGCGGGACCTTCTTGGTG 25369 29 96.6 32 ............................C CGTGCTGACGGAACAGGTTCACAAACAGCGAC 25430 29 100.0 32 ............................. GCTGTGCAGGCAGGTTTGGCGCCGGGTAATTC 25491 29 96.6 32 ............................C ATCGGTTCGGCTGTCGCTCAGGCTTCCGCAGC 25552 29 100.0 32 ............................. AATGTCACCGGCGCGATTAAGGACGCGACCGG 25613 29 96.6 32 ............................C AGGTCAAAAGTCAGGGCAGACTCCACGCCCTC 25674 29 96.6 32 ............................C AGTACGCGGCCGAATGATGGCAGCGAAACTAG 25735 29 96.6 32 ............................T CCTGCGTTGGGGAAGCGCATGTCGTTTGAGAC 25796 29 96.6 32 ............................T AACCCCAGGCACTGTGAGGGTGGTGAGCCCGT 25857 29 96.6 32 ............................C ACGAATCGGGTTGACCTCCTGCCACGGGATGT 25918 29 100.0 32 ............................. GTGCCCAGCATCTCCTGGTAGTTGGCGATATC 25979 29 96.6 32 ............................C GAAAACGCGAAGGTCTGGGTGTGGTCGTTCTG 26040 29 86.2 0 .....................TA....AA | ========== ====== ====== ====== ============================= ================================ ================== 35 29 97.7 32 GTTTTCCCCGCGCGAGCGGGGATGTTCCG # Left flank : AAACGAGGAATTCGGCGAAGTTATCGAATTGTGGGATTACAGCCGCGGCACGATTAAAGGTGGTACAAACTACTCCTCCGGAGAACCGCCATGGTGACACTAGTTTTGACGAGCTGCCCTGCCGGGTTGCGGGGACATCTGACTCGGTGGCTTGAAGAAATTGCCCCAGGTGTATTTGTTGGGAAAGTTAACTCTCGTCTCCGTGACATCTTGTGGGGACTCGTCATCGAAATGGTCGGCAATGGTCGTGCCATTATGGTTTATCCGGATCGGAATGCCGAACAAGGGTATGCCTACAAGGTGCATCGCCACGATTGGGAGGTCGTTGATGTTGAGGGGCTGTCCCTGATTCGGCGTCCGTTCAAAAACAGGACTAAAGGTGAGGTCGGATTACAACCGGGGTGGTCAAATCCAGCCAAGCGGCGTCGCGCCCGACGTGCTCGTCGAGCTAAGTGATATAAAATTCTTCACTGGGAACTGAAATTTGCTGGTTATTAAGT # Right flank : AGTTTGATTATGAGGGGATACTATCCCCATAGAAATACTCAGGAGGGTAAACGCATGACAAGGTATTGGGATCACAGCGGCAGTATCTACAAAGATGACGGTCAGGAAGACTCGTTCGACCCCATCACCGAGCAACAGGCACTCGCTGAGATCGCAGAGCAGCAGGAACGCTACAACAAAAAGATGGAGAACAAAGTCAAGGAACTGCGCGCGAGAATGAAATCGGTCGGTGCGCAGGCCAGGCAGACCACCGAACAGCCGTATCCAACCTTTACTGAGCAGTCCGCCGCATACCGTGAGGGCGCGCAGGCCTACAACGAGGGCAAATCTTGGCGCGATAACCCGCATGCCCCCGAGTCGGGTCTAGCCGCCCCGTGGCGCATGGGTTTCAATACCCGCAAGCAGCAGGTAGCGGAGGTTAGGGCACAGCGAGCCGCCGCCGCGCAACAGGAGAACTAGGCCCTGGCCGCAAAAACGCTCAACCAAAGCTCTAAATTCCT # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGCGAGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //